RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C GUA1P38625 525 aaKnown RBP2.96□□□□□ -1.94
UBR1YGR184C STM1P39015 273 aaKnown RBP2.96□□□□□ -1.94
UBR1YGR184C YTA7P40340 1379 aa2.96□□□□□ -1.94
UBR1YGR184C SSF1P38789 453 aaPredicted RBP2.95□□□□□ -1.94
UBR1YGR184C NSR1P27476 414 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
UBR1YGR184C TFB3Q03290 321 aa2.95□□□□□ -1.94
UBR1YGR184C DIT2P21595 489 aa2.94□□□□□ -1.94
UBR1YGR184C MRM1P25270 412 aa2.94□□□□□ -1.94
UBR1YGR184C YPP1P46951 817 aa2.94□□□□□ -1.94
UBR1YGR184C NOP2P40991 618 aaKnown RBP2.94□□□□□ -1.94
UBR1YGR184C YMR1P47147 688 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
UBR1YGR184C PAM1P37304 830 aaKnown RBP2.93□□□□□ -1.94
UBR1YGR184C NMD2P38798 1089 aaKnown RBP2.93□□□□□ -1.94
UBR1YGR184C EPS1P40557 701 aa2.93□□□□□ -1.94
UBR1YGR184C YRB30P53107 440 aaPredicted RBP2.93□□□□□ -1.94
UBR1YGR184C CSN12P47130 423 aa2.93□□□□□ -1.94
UBR1YGR184C RPL34AP87262 121 aaPredicted RBP2.93□□□□□ -1.94
UBR1YGR184C RPP1BP10622 106 aaKnown RBP2.93□□□□□ -1.94
UBR1YGR184C MET10P39692 1035 aa2.93□□□□□ -1.94
UBR1YGR184C HOP09932 586 aa2.92□□□□□ -1.94
UBR1YGR184C KIC1P38692 1080 aa2.92□□□□□ -1.94
UBR1YGR184C NNF1P47149 201 aa2.92□□□□□ -1.94
UBR1YGR184C BCH2P36122 765 aa2.92□□□□□ -1.94
UBR1YGR184C UBP10P53874 792 aaPredicted RBP2.92□□□□□ -1.94
UBR1YGR184C IOC4Q04213 475 aa2.92□□□□□ -1.94
UBR1YGR184C MAK16P10962 306 aaPredicted RBP2.92□□□□□ -1.94
UBR1YGR184C TTI1P36097 1038 aa2.92□□□□□ -1.94
UBR1YGR184C SCT1P32784 759 aa2.91□□□□□ -1.94
UBR1YGR184C UBP14P38237 781 aaKnown RBP2.91□□□□□ -1.94
UBR1YGR184C KEX1P09620 729 aa2.91□□□□□ -1.94
UBR1YGR184C VPS29P38759 282 aa2.91□□□□□ -1.94
UBR1YGR184C YGL081WP53156 320 aa2.91□□□□□ -1.94
UBR1YGR184C YBL036CP38197 257 aa2.91□□□□□ -1.94
UBR1YGR184C BIM1P40013 344 aa2.91□□□□□ -1.94
UBR1YGR184C NAF1P53919 492 aaKnown RBP2.91□□□□□ -1.94
UBR1YGR184C SEN54Q02825 467 aaPredicted RBP2.91□□□□□ -1.94
UBR1YGR184C NOB1Q08444 459 aaKnown RBP2.91□□□□□ -1.94
UBR1YGR184C OCA5P38738 679 aa2.9□□□□□ -1.95
UBR1YGR184C GLN1P32288 370 aaKnown RBP2.9□□□□□ -1.95
UBR1YGR184C FPR3P38911 411 aaKnown RBP2.9□□□□□ -1.95
UBR1YGR184C YJL049WP47048 450 aa2.9□□□□□ -1.95
UBR1YGR184C PTC3P34221 468 aaKnown RBP2.9□□□□□ -1.95
UBR1YGR184C HST2P53686 357 aa2.89□□□□□ -1.95
UBR1YGR184C RMD1Q03441 430 aa2.89□□□□□ -1.95
UBR1YGR184C BRN1P38170 754 aa2.89□□□□□ -1.95
UBR1YGR184C BDF1P35817 686 aa2.89□□□□□ -1.95
UBR1YGR184C ATG3P40344 310 aa2.89□□□□□ -1.95
UBR1YGR184C SUB1P54000 292 aaKnown RBP2.89□□□□□ -1.95
UBR1YGR184C GUT1P32190 709 aa2.89□□□□□ -1.95
UBR1YGR184C TEA1P47988 759 aa2.89□□□□□ -1.95
UBR1YGR184C MIF2P35201 549 aa2.88□□□□□ -1.95
UBR1YGR184C EDS1P38073 919 aa2.88□□□□□ -1.95
UBR1YGR184C RAD54P32863 898 aa2.88□□□□□ -1.95
UBR1YGR184C NAB3P38996 802 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
UBR1YGR184C OSW7P43611 510 aa2.88□□□□□ -1.95
UBR1YGR184C RRN6P32786 894 aa2.88□□□□□ -1.95
UBR1YGR184C YAF9P53930 226 aa2.88□□□□□ -1.95
UBR1YGR184C PPX1P38698 397 aa2.87□□□□□ -1.95
UBR1YGR184C YDR090CQ03193 310 aa2.87□□□□□ -1.95
UBR1YGR184C CSC1Q06538 782 aa2.87□□□□□ -1.95
UBR1YGR184C SPT2P06843 333 aaPredicted RBP2.87□□□□□ -1.95
UBR1YGR184C CDC27P38042 758 aa2.87□□□□□ -1.95
UBR1YGR184C RCR1P38212 213 aa2.87□□□□□ -1.95
UBR1YGR184C TIF1P10081 395 aaKnown RBP2.87□□□□□ -1.95
UBR1YGR184C YJL007CP47080 104 aa2.87□□□□□ -1.95
UBR1YGR184C ITT1Q04638 464 aa2.87□□□□□ -1.95
UBR1YGR184C ATG32P40458 529 aa2.86□□□□□ -1.95
UBR1YGR184C RTF1P53064 558 aa2.86□□□□□ -1.95
UBR1YGR184C FAR11P53917 953 aa2.86□□□□□ -1.95
UBR1YGR184C PUF6Q04373 656 aaKnown RBP2.86□□□□□ -1.95
UBR1YGR184C LAM6Q08001 693 aa2.86□□□□□ -1.95
UBR1YGR184C SAM3Q08986 587 aa2.86□□□□□ -1.95
UBR1YGR184C TFB4Q12004 338 aa2.86□□□□□ -1.95
UBR1YGR184C GRE2Q12068 342 aaKnown RBP2.86□□□□□ -1.95
UBR1YGR184C SUP45P12385 437 aaKnown RBP2.86□□□□□ -1.95
UBR1YGR184C RRP14P36080 434 aaKnown RBP2.86□□□□□ -1.95
UBR1YGR184C ORC6P38826 435 aa2.86□□□□□ -1.95
UBR1YGR184C MRX10Q05648 414 aa2.85□□□□□ -1.95
UBR1YGR184C YLR326WQ06170 240 aaKnown RBP2.85□□□□□ -1.95
UBR1YGR184C SIT4P20604 311 aa2.85□□□□□ -1.95
UBR1YGR184C ATH1P48016 1211 aa2.85□□□□□ -1.95
UBR1YGR184C MSC6Q08818 692 aaKnown RBP2.85□□□□□ -1.95
UBR1YGR184C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
UBR1YGR184C PKC1P24583 1151 aa2.85□□□□□ -1.95
UBR1YGR184C YGR273CP53329 174 aa2.85□□□□□ -1.95
UBR1YGR184C YMR196WQ04336 1088 aa2.85□□□□□ -1.95
UBR1YGR184C UTP13Q05946 817 aaKnown RBP2.84□□□□□ -1.95
UBR1YGR184C HAA1Q12753 694 aaKnown RBP2.84□□□□□ -1.95
UBR1YGR184C YPR204WQ08995 1032 aa2.84□□□□□ -1.95
UBR1YGR184C RRP15Q06511 250 aaPredicted RBP2.84□□□□□ -1.96
UBR1YGR184C RTG2P32608 588 aaKnown RBP2.83□□□□□ -1.96
UBR1YGR184C RIM21P48565 533 aa2.83□□□□□ -1.96
UBR1YGR184C ATG1P53104 897 aa2.83□□□□□ -1.96
UBR1YGR184C VPS72Q03388 795 aa2.83□□□□□ -1.96
UBR1YGR184C MMP1Q12372 583 aa2.83□□□□□ -1.96
UBR1YGR184C BIO2P32451 375 aa2.83□□□□□ -1.96
UBR1YGR184C GAP1P19145 602 aaPredicted RBP2.83□□□□□ -1.96
UBR1YGR184C PUP1P25043 261 aa2.83□□□□□ -1.96
UBR1YGR184C ACF4P47129 309 aa2.83□□□□□ -1.96
UBR1YGR184C DBP1P24784 617 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms