RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeastyeast

Gene VAM7, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM7YGL212W TY2B-BQ12491 1770 aa7.96□□□□□ -1.14
VAM7YGL212W AIM44Q99299 758 aa7.95□□□□□ -1.14
VAM7YGL212W AVT3P36062 692 aa7.92□□□□□ -1.14
VAM7YGL212W TOP2P06786 1428 aaKnown RBP7.92□□□□□ -1.14
VAM7YGL212W DOP1Q03921 1698 aa7.89□□□□□ -1.15
VAM7YGL212W PDR15Q04182 1529 aaKnown RBP7.87□□□□□ -1.15
VAM7YGL212W TY1B-DR3Q99231 1755 aa7.86□□□□□ -1.15
VAM7YGL212W SPO14P36126 1683 aa7.83□□□□□ -1.16
VAM7YGL212W YRB30P53107 440 aaPredicted RBP7.82□□□□□ -1.16
VAM7YGL212W IOC4Q04213 475 aa7.81□□□□□ -1.16
VAM7YGL212W SPP41P38904 1435 aa7.8□□□□□ -1.16
VAM7YGL212W TY1B-JR2P47100 1755 aaKnown RBP7.8□□□□□ -1.16
VAM7YGL212W TY1B-ER2Q03619 1755 aa7.8□□□□□ -1.16
VAM7YGL212W TY1B-MR1Q04214 1755 aa7.8□□□□□ -1.16
VAM7YGL212W TY1B-MR2Q04670 1755 aaKnown RBP7.8□□□□□ -1.16
VAM7YGL212W TY1B-LR1Q12088 1755 aaKnown RBP7.8□□□□□ -1.16
VAM7YGL212W TY1B-NL1Q12112 1755 aa7.8□□□□□ -1.16
VAM7YGL212W TY1B-GR1Q12141 1755 aa7.8□□□□□ -1.16
VAM7YGL212W TY1B-BLQ12490 1755 aa7.8□□□□□ -1.16
VAM7YGL212W SSN2P38931 1420 aa7.79□□□□□ -1.16
VAM7YGL212W RPO21P04050 1733 aaKnown RBP7.79□□□□□ -1.16
VAM7YGL212W GLN1P32288 370 aaKnown RBP7.77□□□□□ -1.17
VAM7YGL212W ULS1Q08562 1619 aa7.76□□□□□ -1.17
VAM7YGL212W TSC11P40061 1430 aa7.75□□□□□ -1.17
VAM7YGL212W TRM3Q07527 1436 aa7.75□□□□□ -1.17
VAM7YGL212W DNF3Q12674 1656 aa7.74□□□□□ -1.17
VAM7YGL212W MET10P39692 1035 aa7.74□□□□□ -1.17
VAM7YGL212W SNT2P53127 1403 aa7.73□□□□□ -1.17
VAM7YGL212W VTH1P40438 1549 aa7.72□□□□□ -1.17
VAM7YGL212W VTH2P40890 1549 aa7.72□□□□□ -1.17
VAM7YGL212W IFH1P39520 1085 aa7.7□□□□□ -1.18
VAM7YGL212W PDR10P51533 1564 aa7.7□□□□□ -1.18
VAM7YGL212W ARO1P08566 1588 aaKnown RBP7.68□□□□□ -1.18
VAM7YGL212W LEU3P08638 886 aa7.65□□□□□ -1.18
VAM7YGL212W SMC4Q12267 1418 aa7.65□□□□□ -1.18
VAM7YGL212W MAK10Q02197 733 aa7.64□□□□□ -1.19
VAM7YGL212W IQG1Q12280 1495 aa7.63□□□□□ -1.19
VAM7YGL212W PRI1P10363 409 aa7.63□□□□□ -1.19
VAM7YGL212W DIP2Q12220 943 aaPredicted RBP7.62□□□□□ -1.19
VAM7YGL212W GDB1Q06625 1536 aa7.61□□□□□ -1.19
VAM7YGL212W MYO4P32492 1471 aa7.61□□□□□ -1.19
VAM7YGL212W RRD1P40454 393 aaKnown RBP7.59□□□□□ -1.19
VAM7YGL212W BNR1P40450 1375 aa7.59□□□□□ -1.2
VAM7YGL212W YAP3P38749 330 aa7.58□□□□□ -1.2
VAM7YGL212W ORC1P54784 914 aaPredicted RBP7.58□□□□□ -1.2
VAM7YGL212W YTA7P40340 1379 aa7.58□□□□□ -1.2
VAM7YGL212W YOR1P53049 1477 aa7.56□□□□□ -1.2
VAM7YGL212W USO1P25386 1790 aa7.56□□□□□ -1.2
VAM7YGL212W TOP1P04786 769 aa7.55□□□□□ -1.2
VAM7YGL212W PDR12Q02785 1511 aa7.55□□□□□ -1.2
VAM7YGL212W SNQ2P32568 1501 aaKnown RBP7.54□□□□□ -1.2
VAM7YGL212W YIL055CP40523 627 aaKnown RBP7.53□□□□□ -1.2
VAM7YGL212W THI12P42883 340 aa7.53□□□□□ -1.2
VAM7YGL212W THI5P43534 340 aa7.53□□□□□ -1.2
VAM7YGL212W THI11P47183 340 aa7.53□□□□□ -1.2
VAM7YGL212W THI13Q07748 340 aa7.53□□□□□ -1.2
VAM7YGL212W POL1P13382 1468 aa7.53□□□□□ -1.2
VAM7YGL212W SIS2P36024 562 aa7.52□□□□□ -1.21
VAM7YGL212W RTT106P40161 455 aa7.52□□□□□ -1.21
VAM7YGL212W YAH1Q12184 172 aaKnown RBP7.52□□□□□ -1.21
VAM7YGL212W BUD3P25558 1636 aa7.52□□□□□ -1.21
VAM7YGL212W NUP157P40064 1391 aaKnown RBP7.51□□□□□ -1.21
VAM7YGL212W TY3B-GQ99315 1547 aa7.51□□□□□ -1.21
VAM7YGL212W YSP2Q06681 1438 aa7.51□□□□□ -1.21
VAM7YGL212W CHC1P22137 1653 aaKnown RBP7.51□□□□□ -1.21
VAM7YGL212W YMR196WQ04336 1088 aa7.48□□□□□ -1.21
VAM7YGL212W SNU71P53207 620 aaKnown RBP7.47□□□□□ -1.21
VAM7YGL212W MLP2P40457 1679 aa7.47□□□□□ -1.21
VAM7YGL212W STU1P38198 1513 aa7.47□□□□□ -1.21
VAM7YGL212W DMA2P53924 522 aa7.46□□□□□ -1.22
VAM7YGL212W RLF2Q12495 606 aa7.46□□□□□ -1.22
VAM7YGL212W YFR016CP43597 1233 aaKnown RBP7.45□□□□□ -1.22
VAM7YGL212W APP1P53933 587 aa7.44□□□□□ -1.22
VAM7YGL212W MNN4P36044 1178 aa7.43□□□□□ -1.22
VAM7YGL212W YMR074CQ04773 145 aa7.41□□□□□ -1.22
VAM7YGL212W STH1P32597 1359 aa7.41□□□□□ -1.22
VAM7YGL212W KRI1P42846 591 aaKnown RBP7.39□□□□□ -1.23
VAM7YGL212W SSA1P10591 642 aaKnown RBP7.37□□□□□ -1.23
VAM7YGL212W RPS0BP46654 252 aaKnown RBP7.35□□□□□ -1.23
VAM7YGL212W SAS10Q12136 610 aaPredicted RBP7.33□□□□□ -1.24
VAM7YGL212W HAP1P0CE41 1502 aa7.32□□□□□ -1.24
VAM7YGL212W TY1B-NL2Q99337 1749 aaKnown RBP7.31□□□□□ -1.24
VAM7YGL212W RPN1P38764 993 aaKnown RBP7.29□□□□□ -1.24
VAM7YGL212W BUD31P25337 157 aaPredicted RBP7.28□□□□□ -1.24
VAM7YGL212W EBP2P36049 427 aaKnown RBP7.28□□□□□ -1.24
VAM7YGL212W YBT1P32386 1661 aa7.25□□□□□ -1.25
VAM7YGL212W BRL1P38770 471 aa7.25□□□□□ -1.25
VAM7YGL212W SEC7P11075 2009 aaKnown RBP7.23□□□□□ -1.25
VAM7YGL212W CAB3P36076 571 aa7.2□□□□□ -1.26
VAM7YGL212W MDG1P53885 366 aa7.2□□□□□ -1.26
VAM7YGL212W PTP3P40048 928 aa7.19□□□□□ -1.26
VAM7YGL212W SUB1P54000 292 aaKnown RBP7.19□□□□□ -1.26
VAM7YGL212W NUP188P52593 1655 aaKnown RBP7.19□□□□□ -1.26
VAM7YGL212W IML1P47170 1584 aa7.17□□□□□ -1.26
VAM7YGL212W SWE1P32944 819 aa7.17□□□□□ -1.26
VAM7YGL212W BCK1Q01389 1478 aa7.17□□□□□ -1.26
VAM7YGL212W REB1P21538 810 aa7.16□□□□□ -1.26
VAM7YGL212W ASF1P32447 279 aa7.16□□□□□ -1.26
VAM7YGL212W YML020WQ03722 664 aa7.16□□□□□ -1.26
VAM7YGL212W NOP8Q08287 484 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms