RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeastyeast

Gene VAM7, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM7YGL212W INO80P53115 1489 aa11.1□□□□□ -0.63
VAM7YGL212W MON2P48563 1636 aaPredicted RBP11.02□□□□□ -0.64
VAM7YGL212W RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.7
VAM7YGL212W DNA2P38859 1522 aa10.53□□□□□ -0.72
VAM7YGL212W KOG1P38873 1557 aa10.24□□□□□ -0.77
VAM7YGL212W SWR1Q05471 1514 aa10.17□□□□□ -0.78
VAM7YGL212W SPA2P23201 1466 aaKnown RBP9.98□□□□□ -0.81
VAM7YGL212W MTC1P47018 478 aaKnown RBP9.94□□□□□ -0.82
VAM7YGL212W TY1B-DR4Q07793 1604 aa9.67□□□□□ -0.86
VAM7YGL212W TCB3Q03640 1545 aaKnown RBP9.63□□□□□ -0.87
VAM7YGL212W RQC2Q12532 1038 aaKnown RBP9.61□□□□□ -0.87
VAM7YGL212W MIF2P35201 549 aa9.59□□□□□ -0.87
VAM7YGL212W DRS1P32892 752 aaKnown RBP9.5□□□□□ -0.89
VAM7YGL212W ECM5Q03214 1411 aa9.41□□□□□ -0.9
VAM7YGL212W TFA1P36100 482 aa9.3□□□□□ -0.92
VAM7YGL212W TAF7Q05021 590 aa9.3□□□□□ -0.92
VAM7YGL212W REV3P14284 1504 aa9.24□□□□□ -0.93
VAM7YGL212W SPT6P23615 1451 aaKnown RBP9.22□□□□□ -0.93
VAM7YGL212W YFR006WP43590 535 aa9.22□□□□□ -0.93
VAM7YGL212W BUD4P47136 1447 aa9.21□□□□□ -0.94
VAM7YGL212W MDS3P53094 1487 aa9.19□□□□□ -0.94
VAM7YGL212W HSL1P34244 1518 aa9.19□□□□□ -0.94
VAM7YGL212W THO2P53552 1597 aaKnown RBP9.14□□□□□ -0.95
VAM7YGL212W BPT1P14772 1559 aa9.02□□□□□ -0.97
VAM7YGL212W PEP1P32319 1579 aa8.96□□□□□ -0.97
VAM7YGL212W SGS1P35187 1447 aa8.95□□□□□ -0.98
VAM7YGL212W HIR3P47171 1648 aa8.94□□□□□ -0.98
VAM7YGL212W ABP1P15891 592 aaKnown RBP8.91□□□□□ -0.98
VAM7YGL212W BFR2Q06631 534 aaKnown RBP8.84□□□□□ -0.99
VAM7YGL212W YCF1P39109 1515 aaKnown RBP8.84□□□□□ -0.99
VAM7YGL212W TAF2P23255 1407 aa8.82□□□□□ -1
VAM7YGL212W ATG2P53855 1592 aa8.73□□□□□ -1.01
VAM7YGL212W MYO2P19524 1574 aaKnown RBP8.73□□□□□ -1.01
VAM7YGL212W LTE1P07866 1435 aa8.72□□□□□ -1.01
VAM7YGL212W BNI1P41832 1953 aa8.71□□□□□ -1.02
VAM7YGL212W ITT1Q04638 464 aa8.69□□□□□ -1.02
VAM7YGL212W XRN1P22147 1528 aaKnown RBP8.69□□□□□ -1.02
VAM7YGL212W MET5P47169 1442 aa8.67□□□□□ -1.02
VAM7YGL212W CDC25P04821 1589 aa8.65□□□□□ -1.03
VAM7YGL212W RPA190P10964 1664 aaKnown RBP8.62□□□□□ -1.03
VAM7YGL212W MMS1Q06211 1407 aa8.59□□□□□ -1.03
VAM7YGL212W DNF1P32660 1571 aa8.58□□□□□ -1.04
VAM7YGL212W SSK2P53599 1579 aa8.57□□□□□ -1.04
VAM7YGL212W SKI3P17883 1432 aaKnown RBP8.57□□□□□ -1.04
VAM7YGL212W GEA2P39993 1459 aaKnown RBP8.55□□□□□ -1.04
VAM7YGL212W IRC20Q06554 1556 aa8.53□□□□□ -1.04
VAM7YGL212W RPO31P04051 1460 aa8.49□□□□□ -1.05
VAM7YGL212W ESC1Q03661 1658 aaKnown RBP8.48□□□□□ -1.05
VAM7YGL212W UFD4P33202 1483 aa8.45□□□□□ -1.06
VAM7YGL212W RKR1Q04781 1562 aa8.43□□□□□ -1.06
VAM7YGL212W CHD1P32657 1468 aa8.4□□□□□ -1.06
VAM7YGL212W DRS2P39524 1355 aa8.37□□□□□ -1.07
VAM7YGL212W DNF2Q12675 1612 aa8.29□□□□□ -1.08
VAM7YGL212W PAN1P32521 1480 aa8.26□□□□□ -1.09
VAM7YGL212W LEO1P38439 464 aa8.26□□□□□ -1.09
VAM7YGL212W YOR093CQ12275 1648 aa8.25□□□□□ -1.09
VAM7YGL212W YPK9Q12697 1472 aa8.24□□□□□ -1.09
VAM7YGL212W SIN3P22579 1536 aa8.23□□□□□ -1.09
VAM7YGL212W ESP1Q03018 1630 aa8.2□□□□□ -1.1
VAM7YGL212W SCC2Q04002 1493 aa8.19□□□□□ -1.1
VAM7YGL212W URN1Q06525 465 aaKnown RBP8.19□□□□□ -1.1
VAM7YGL212W TY1B-BRQ12193 1756 aa8.17□□□□□ -1.1
VAM7YGL212W TY1B-GR3Q12316 1755 aa8.17□□□□□ -1.1
VAM7YGL212W TY1B-ORQ92393 1755 aa8.17□□□□□ -1.1
VAM7YGL212W VPS15P22219 1454 aa8.16□□□□□ -1.1
VAM7YGL212W DMA1P38823 416 aa8.13□□□□□ -1.11
VAM7YGL212W TRM732Q03496 1420 aa8.12□□□□□ -1.11
VAM7YGL212W YRF1-1P0CX20 1796 aa8.12□□□□□ -1.11
VAM7YGL212W YRF1-5P0CX21 1796 aa8.12□□□□□ -1.11
VAM7YGL212W YRF1-8P0CX22 1796 aa8.12□□□□□ -1.11
VAM7YGL212W TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-CP25384 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
VAM7YGL212W TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
VAM7YGL212W TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
VAM7YGL212W NUP159P40477 1460 aa8.07□□□□□ -1.12
VAM7YGL212W MMS22Q06164 1454 aa8.03□□□□□ -1.12
VAM7YGL212W NTE1Q04958 1679 aa8□□□□□ -1.13
VAM7YGL212W TY1B-HO13535 1793 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-DR5P0C2I2 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-DR6P0C2I3 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-LR2P0C2I5 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-LR3P0C2I6 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W TY1B-PR1P0C2I9 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W TY1B-PR2P0C2J0 1756 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-PR3P0C2J1 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W TY1B-JR1P47098 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-ML2Q03434 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W TY1B-ER1Q03612 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-ML1Q04711 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W TY1B-GR2Q12269 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-OLQ12273 1755 aa7.99□□□□□ -1.13
VAM7YGL212W TY1B-PLQ12414 1755 aaKnown RBP7.99□□□□□ -1.13
VAM7YGL212W NUP170P38181 1502 aa7.98□□□□□ -1.13
VAM7YGL212W NAP1P25293 417 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms