RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W COG8Q04632 607 aa9.41□□□□□ -0.9
YRF1-1YDR545W TOP2P06786 1428 aaKnown RBP9.41□□□□□ -0.9
YRF1-1YDR545W PDR15Q04182 1529 aaKnown RBP9.41□□□□□ -0.9
YRF1-1YDR545W ROX1P25042 368 aa9.4□□□□□ -0.91
YRF1-1YDR545W DJP1P40564 432 aa9.39□□□□□ -0.91
YRF1-1YDR545W NUP159P40477 1460 aa9.38□□□□□ -0.91
YRF1-1YDR545W RAD2P07276 1031 aa9.38□□□□□ -0.91
YRF1-1YDR545W ESC2Q06340 456 aa9.38□□□□□ -0.91
YRF1-1YDR545W RVB2Q12464 471 aaKnown RBP9.37□□□□□ -0.91
YRF1-1YDR545W YLR419WQ06698 1435 aaKnown RBP9.37□□□□□ -0.91
YRF1-1YDR545W VPS15P22219 1454 aa9.36□□□□□ -0.91
YRF1-1YDR545W RIX1P38883 763 aaPredicted RBP9.36□□□□□ -0.91
YRF1-1YDR545W YDL144CQ07589 356 aa9.35□□□□□ -0.91
YRF1-1YDR545W ARL1P38116 183 aaKnown RBP9.33□□□□□ -0.92
YRF1-1YDR545W MLP2P40457 1679 aa9.33□□□□□ -0.92
YRF1-1YDR545W TAF5P38129 798 aa9.32□□□□□ -0.92
YRF1-1YDR545W YPP1P46951 817 aa9.32□□□□□ -0.92
YRF1-1YDR545W KOG1P38873 1557 aa9.31□□□□□ -0.92
YRF1-1YDR545W YCF1P39109 1515 aaKnown RBP9.31□□□□□ -0.92
YRF1-1YDR545W ABP1P15891 592 aaKnown RBP9.3□□□□□ -0.92
YRF1-1YDR545W KIP3P53086 805 aaKnown RBP9.3□□□□□ -0.92
YRF1-1YDR545W SLN1P39928 1220 aaPredicted RBP9.3□□□□□ -0.92
YRF1-1YDR545W YIR014WP40570 242 aa9.3□□□□□ -0.92
YRF1-1YDR545W PCT1P13259 424 aa9.29□□□□□ -0.92
YRF1-1YDR545W DNF1P32660 1571 aa9.27□□□□□ -0.92
YRF1-1YDR545W PEP1P32319 1579 aa9.27□□□□□ -0.92
YRF1-1YDR545W BUD27P43573 796 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
YRF1-1YDR545W RPS0BP46654 252 aaKnown RBP9.27□□□□□ -0.93
YRF1-1YDR545W MMS1Q06211 1407 aa9.27□□□□□ -0.93
YRF1-1YDR545W TPM2P40414 161 aa9.27□□□□□ -0.93
YRF1-1YDR545W RPO31P04051 1460 aa9.27□□□□□ -0.93
YRF1-1YDR545W AVT3P36062 692 aa9.26□□□□□ -0.93
YRF1-1YDR545W FPR4Q06205 392 aaPredicted RBP9.26□□□□□ -0.93
YRF1-1YDR545W ESL2P36168 1195 aa9.26□□□□□ -0.93
YRF1-1YDR545W NAP1P25293 417 aaKnown RBP9.25□□□□□ -0.93
YRF1-1YDR545W MSP1P28737 362 aa9.25□□□□□ -0.93
YRF1-1YDR545W CAT8P39113 1433 aa9.25□□□□□ -0.93
YRF1-1YDR545W URN1Q06525 465 aaKnown RBP9.24□□□□□ -0.93
YRF1-1YDR545W YGR130CP53278 816 aa9.24□□□□□ -0.93
YRF1-1YDR545W ITC1P53125 1264 aa9.23□□□□□ -0.93
YRF1-1YDR545W CTR9P89105 1077 aa9.23□□□□□ -0.93
YRF1-1YDR545W RLF2Q12495 606 aa9.23□□□□□ -0.93
YRF1-1YDR545W NOT3P06102 836 aaKnown RBP9.23□□□□□ -0.93
YRF1-1YDR545W SMC3P47037 1230 aa9.22□□□□□ -0.93
YRF1-1YDR545W MIC60P36112 540 aa9.19□□□□□ -0.94
YRF1-1YDR545W LSP1Q12230 341 aaKnown RBP9.19□□□□□ -0.94
YRF1-1YDR545W MDS3P53094 1487 aa9.18□□□□□ -0.94
YRF1-1YDR545W TCD1P38756 429 aa9.18□□□□□ -0.94
YRF1-1YDR545W DAL5P15365 543 aa9.18□□□□□ -0.94
YRF1-1YDR545W RTR1P40084 226 aaPredicted RBP9.18□□□□□ -0.94
YRF1-1YDR545W MAK21Q12176 1025 aaKnown RBP9.17□□□□□ -0.94
YRF1-1YDR545W MDG1P53885 366 aa9.17□□□□□ -0.94
YRF1-1YDR545W LCD1Q04377 747 aa9.17□□□□□ -0.94
YRF1-1YDR545W ATG2P53855 1592 aa9.17□□□□□ -0.94
YRF1-1YDR545W ECM16Q04217 1267 aaKnown RBP9.16□□□□□ -0.94
YRF1-1YDR545W IRC20Q06554 1556 aa9.16□□□□□ -0.94
YRF1-1YDR545W SUI2P20459 304 aaKnown RBP9.16□□□□□ -0.94
YRF1-1YDR545W MPP10P47083 593 aaKnown RBP9.16□□□□□ -0.94
YRF1-1YDR545W EDE1P34216 1381 aa9.16□□□□□ -0.94
YRF1-1YDR545W NST1P53935 1240 aa9.15□□□□□ -0.94
YRF1-1YDR545W MTC1P47018 478 aaKnown RBP9.15□□□□□ -0.94
YRF1-1YDR545W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
YRF1-1YDR545W GEA2P39993 1459 aaKnown RBP9.13□□□□□ -0.95
YRF1-1YDR545W YGL081WP53156 320 aa9.13□□□□□ -0.95
YRF1-1YDR545W RSC1P53236 928 aa9.13□□□□□ -0.95
YRF1-1YDR545W SPE2P21182 396 aa9.13□□□□□ -0.95
YRF1-1YDR545W IOC4Q04213 475 aa9.13□□□□□ -0.95
YRF1-1YDR545W DEF1P35732 738 aaKnown RBP9.12□□□□□ -0.95
YRF1-1YDR545W PAP2P53632 584 aaKnown RBP9.12□□□□□ -0.95
YRF1-1YDR545W PUF6Q04373 656 aaKnown RBP9.12□□□□□ -0.95
YRF1-1YDR545W RTG3P38165 486 aa9.11□□□□□ -0.95
YRF1-1YDR545W NOP53Q12080 455 aaKnown RBP9.11□□□□□ -0.95
YRF1-1YDR545W RAD26P40352 1085 aa9.1□□□□□ -0.95
YRF1-1YDR545W IQG1Q12280 1495 aa9.1□□□□□ -0.95
YRF1-1YDR545W SRS2P12954 1174 aa9.1□□□□□ -0.95
YRF1-1YDR545W ESC1Q03661 1658 aaKnown RBP9.1□□□□□ -0.95
YRF1-1YDR545W CLB1P24868 471 aa9.1□□□□□ -0.95
YRF1-1YDR545W TEA1P47988 759 aa9.1□□□□□ -0.95
YRF1-1YDR545W CWC22P53333 577 aaKnown RBP9.09□□□□□ -0.95
YRF1-1YDR545W GCN2P15442 1659 aa9.09□□□□□ -0.95
YRF1-1YDR545W SPB4P25808 606 aaPredicted RBP9.09□□□□□ -0.95
YRF1-1YDR545W SFI1Q12369 946 aa9.09□□□□□ -0.95
YRF1-1YDR545W TPD3P31383 635 aa9.08□□□□□ -0.96
YRF1-1YDR545W DSN1P40568 576 aa9.08□□□□□ -0.96
YRF1-1YDR545W ULS1Q08562 1619 aa9.08□□□□□ -0.96
YRF1-1YDR545W DEP1P31385 405 aa9.08□□□□□ -0.96
YRF1-1YDR545W NUG1P40010 520 aaKnown RBP9.08□□□□□ -0.96
YRF1-1YDR545W CHZ1P40019 153 aaPredicted RBP9.08□□□□□ -0.96
YRF1-1YDR545W RSM25P40496 264 aa9.08□□□□□ -0.96
YRF1-1YDR545W VPS60Q03390 229 aa9.08□□□□□ -0.96
YRF1-1YDR545W VTH1P40438 1549 aa9.08□□□□□ -0.96
YRF1-1YDR545W VTH2P40890 1549 aa9.08□□□□□ -0.96
YRF1-1YDR545W HOS3Q02959 697 aaKnown RBP9.07□□□□□ -0.96
YRF1-1YDR545W KAR2P16474 682 aaKnown RBP9.07□□□□□ -0.96
YRF1-1YDR545W RNT1Q02555 471 aa9.07□□□□□ -0.96
YRF1-1YDR545W MFT1P33441 392 aaKnown RBP9.06□□□□□ -0.96
YRF1-1YDR545W POL32P47110 350 aa9.06□□□□□ -0.96
YRF1-1YDR545W SAP155P43612 1002 aa9.05□□□□□ -0.96
YRF1-1YDR545W RPN1P38764 993 aaKnown RBP9.05□□□□□ -0.96
YRF1-1YDR545W MET10P39692 1035 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms