RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YBL029C-AQ3E756 94 aa10.12□□□□□ -0.79
SPT3YDR392W SSP1P38871 571 aa10.07□□□□□ -0.8
SPT3YDR392W PSD2P53037 1138 aaKnown RBP10.07□□□□□ -0.8
SPT3YDR392W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
SPT3YDR392W YPK9Q12697 1472 aa10.06□□□□□ -0.8
SPT3YDR392W VNX1P42839 908 aa10.06□□□□□ -0.8
SPT3YDR392W ESP1Q03018 1630 aa10.06□□□□□ -0.8
SPT3YDR392W PAN1P32521 1480 aa10.05□□□□□ -0.8
SPT3YDR392W TY1B-BRQ12193 1756 aa10.04□□□□□ -0.8
SPT3YDR392W TY1B-GR3Q12316 1755 aa10.04□□□□□ -0.8
SPT3YDR392W TY1B-ORQ92393 1755 aa10.04□□□□□ -0.8
SPT3YDR392W VPS15P22219 1454 aa10.03□□□□□ -0.8
SPT3YDR392W YRF1-1P0CX20 1796 aa10.02□□□□□ -0.81
SPT3YDR392W YRF1-5P0CX21 1796 aa10.02□□□□□ -0.81
SPT3YDR392W YRF1-8P0CX22 1796 aa10.02□□□□□ -0.81
SPT3YDR392W SPP1Q03012 353 aa9.98□□□□□ -0.81
SPT3YDR392W GTT3P39996 337 aa9.97□□□□□ -0.81
SPT3YDR392W WSC3Q12215 556 aa9.97□□□□□ -0.81
SPT3YDR392W MRM1P25270 412 aa9.96□□□□□ -0.82
SPT3YDR392W RQC2Q12532 1038 aaKnown RBP9.96□□□□□ -0.82
SPT3YDR392W PDR15Q04182 1529 aaKnown RBP9.95□□□□□ -0.82
SPT3YDR392W SIN3P22579 1536 aa9.92□□□□□ -0.82
SPT3YDR392W TY2B-LR1P0C2J3 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-FP0CX63 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-GR2P0CX64 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-CP25384 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-DR2Q03494 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY1B-DR1Q03855 1755 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-DR3Q07791 1770 aaKnown RBP9.89□□□□□ -0.83
SPT3YDR392W TY2B-OR1Q12113 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-DR1Q12472 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TY2B-OR2Q12501 1770 aa9.89□□□□□ -0.83
SPT3YDR392W TIF11P38912 153 aaKnown RBP9.88□□□□□ -0.83
SPT3YDR392W SCC2Q04002 1493 aa9.87□□□□□ -0.83
SPT3YDR392W MGA2P40578 1113 aa9.86□□□□□ -0.83
SPT3YDR392W PIB1Q06651 286 aa9.83□□□□□ -0.84
SPT3YDR392W TRM732Q03496 1420 aa9.82□□□□□ -0.84
SPT3YDR392W CST9Q06032 482 aa9.81□□□□□ -0.84
SPT3YDR392W NUP170P38181 1502 aa9.81□□□□□ -0.84
SPT3YDR392W DOP1Q03921 1698 aa9.8□□□□□ -0.84
SPT3YDR392W NUP159P40477 1460 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-HO13535 1793 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-DR5P0C2I2 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-DR6P0C2I3 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-LR2P0C2I5 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-LR3P0C2I6 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W TY1B-PR1P0C2I9 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W TY1B-PR2P0C2J0 1756 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-PR3P0C2J1 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W TY1B-JR1P47098 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-ML2Q03434 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W TY1B-ER1Q03612 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-ML1Q04711 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W TY1B-GR2Q12269 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-OLQ12273 1755 aa9.79□□□□□ -0.84
SPT3YDR392W TY1B-PLQ12414 1755 aaKnown RBP9.79□□□□□ -0.84
SPT3YDR392W RTG3P38165 486 aa9.79□□□□□ -0.84
SPT3YDR392W YMR1P47147 688 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
SPT3YDR392W VPS29P38759 282 aa9.75□□□□□ -0.85
SPT3YDR392W ULI1P43604 169 aa9.75□□□□□ -0.85
SPT3YDR392W MSB4Q12317 492 aa9.75□□□□□ -0.85
SPT3YDR392W RRD1P40454 393 aaKnown RBP9.73□□□□□ -0.85
SPT3YDR392W YJL171CP46992 396 aa9.73□□□□□ -0.85
SPT3YDR392W AIR2Q12476 344 aaKnown RBP9.73□□□□□ -0.85
SPT3YDR392W DBP1P24784 617 aaKnown RBP9.72□□□□□ -0.85
SPT3YDR392W EAP1P36041 632 aaKnown RBP9.72□□□□□ -0.85
SPT3YDR392W FKH1P40466 484 aa9.72□□□□□ -0.85
SPT3YDR392W IOC2Q12072 812 aa9.71□□□□□ -0.86
SPT3YDR392W LDB19Q12502 818 aa9.71□□□□□ -0.86
SPT3YDR392W TY2B-BQ12491 1770 aa9.7□□□□□ -0.86
SPT3YDR392W SPO14P36126 1683 aa9.69□□□□□ -0.86
SPT3YDR392W GLN1P32288 370 aaKnown RBP9.67□□□□□ -0.86
SPT3YDR392W YOL036WQ08206 761 aa9.64□□□□□ -0.87
SPT3YDR392W MMS22Q06164 1454 aa9.64□□□□□ -0.87
SPT3YDR392W DNF3Q12674 1656 aa9.64□□□□□ -0.87
SPT3YDR392W VMA1P17255 1071 aaKnown RBP9.62□□□□□ -0.87
SPT3YDR392W STS1P38637 319 aa9.62□□□□□ -0.87
SPT3YDR392W SET4P42948 560 aa9.62□□□□□ -0.87
SPT3YDR392W SAM3Q08986 587 aa9.59□□□□□ -0.87
SPT3YDR392W TRP5P00931 707 aaKnown RBP9.57□□□□□ -0.88
SPT3YDR392W RCR1P38212 213 aa9.57□□□□□ -0.88
SPT3YDR392W BMT6Q12291 365 aa9.57□□□□□ -0.88
SPT3YDR392W RPO21P04050 1733 aaKnown RBP9.55□□□□□ -0.88
SPT3YDR392W TY1B-DR3Q99231 1755 aa9.55□□□□□ -0.88
SPT3YDR392W RTG1P32607 177 aa9.54□□□□□ -0.88
SPT3YDR392W NCR1Q12200 1170 aa9.52□□□□□ -0.89
SPT3YDR392W TRM3Q07527 1436 aa9.51□□□□□ -0.89
SPT3YDR392W TY1B-JR2P47100 1755 aaKnown RBP9.51□□□□□ -0.89
SPT3YDR392W TY1B-ER2Q03619 1755 aa9.51□□□□□ -0.89
SPT3YDR392W TY1B-MR1Q04214 1755 aa9.51□□□□□ -0.89
SPT3YDR392W TY1B-MR2Q04670 1755 aaKnown RBP9.51□□□□□ -0.89
SPT3YDR392W TY1B-LR1Q12088 1755 aaKnown RBP9.51□□□□□ -0.89
SPT3YDR392W TY1B-NL1Q12112 1755 aa9.51□□□□□ -0.89
SPT3YDR392W TY1B-GR1Q12141 1755 aa9.51□□□□□ -0.89
SPT3YDR392W TY1B-BLQ12490 1755 aa9.51□□□□□ -0.89
SPT3YDR392W YNL035CP53962 389 aaKnown RBP9.51□□□□□ -0.89
SPT3YDR392W SEC61P32915 480 aa9.5□□□□□ -0.89
SPT3YDR392W ULS1Q08562 1619 aa9.49□□□□□ -0.89
SPT3YDR392W PDR10P51533 1564 aa9.49□□□□□ -0.89
SPT3YDR392W ARO1P08566 1588 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms