RNA–Protein interactions for RNA: YDR209C

YDR209C, Transcript of Dubious open reading frame, yeast

Gene YDR209C, Length 414 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR209C	YDR209C	SPT6	P23615	1451 aa	Known RBP	3.25	□□□□□ -1.89
YDR209C	YDR209C	IME2	P32581	645 aa		3.25	□□□□□ -1.89
YDR209C	YDR209C	SPT21	P35209	758 aa		3.25	□□□□□ -1.89
YDR209C	YDR209C	BRL1	P38770	471 aa		3.25	□□□□□ -1.89
YDR209C	YDR209C	SUB1	P54000	292 aa	Known RBP	3.25	□□□□□ -1.89
YDR209C	YDR209C	VPS72	Q03388	795 aa		3.25	□□□□□ -1.89
YDR209C	YDR209C	GRX3	Q03835	250 aa		3.25	□□□□□ -1.89
YDR209C	YDR209C	YSH1	Q06224	779 aa	Predicted RBP	3.25	□□□□□ -1.89
YDR209C	YDR209C	SSA1	P10591	642 aa	Known RBP	3.24	□□□□□ -1.89
YDR209C	YDR209C	SSA2	P10592	639 aa	Known RBP	3.24	□□□□□ -1.89
YDR209C	YDR209C	NNF2	P53253	936 aa		3.24	□□□□□ -1.89
YDR209C	YDR209C	NST1	P53935	1240 aa		3.24	□□□□□ -1.89
YDR209C	YDR209C	SGS1	P35187	1447 aa		3.24	□□□□□ -1.89
YDR209C	YDR209C	PET111	P08468	800 aa		3.23	□□□□□ -1.89
YDR209C	YDR209C	MSH4	P40965	878 aa	Predicted RBP	3.23	□□□□□ -1.89
YDR209C	YDR209C	MPP10	P47083	593 aa	Known RBP	3.23	□□□□□ -1.89
YDR209C	YDR209C	ORC1	P54784	914 aa	Predicted RBP	3.23	□□□□□ -1.89
YDR209C	YDR209C	ECM5	Q03214	1411 aa		3.23	□□□□□ -1.89
YDR209C	YDR209C	ETT1	Q08421	412 aa	Known RBP	3.23	□□□□□ -1.89
YDR209C	YDR209C	HSC82	P15108	705 aa	Known RBP	3.22	□□□□□ -1.89
YDR209C	YDR209C	CDC11	P32458	415 aa		3.22	□□□□□ -1.89
YDR209C	YDR209C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
YDR209C	YDR209C	TAN1	P53072	289 aa	Predicted RBP	3.22	□□□□□ -1.89
YDR209C	YDR209C	YBL029C-A	Q3E756	94 aa		3.22	□□□□□ -1.89
YDR209C	YDR209C	BRN1	P38170	754 aa		3.21	□□□□□ -1.9
YDR209C	YDR209C	HIR3	P47171	1648 aa		3.21	□□□□□ -1.9
YDR209C	YDR209C	LTV1	P34078	463 aa		3.2	□□□□□ -1.9
YDR209C	YDR209C	BYE1	P36106	594 aa		3.2	□□□□□ -1.9
YDR209C	YDR209C	PAF1	P38351	445 aa		3.2	□□□□□ -1.9
YDR209C	YDR209C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
YDR209C	YDR209C	PEA2	P40091	420 aa		3.2	□□□□□ -1.9
YDR209C	YDR209C	THO2	P53552	1597 aa	Known RBP	3.2	□□□□□ -1.9
YDR209C	YDR209C	ASF1	P32447	279 aa		3.19	□□□□□ -1.9
YDR209C	YDR209C	SWE1	P32944	819 aa		3.19	□□□□□ -1.9
YDR209C	YDR209C	EAF7	P53911	425 aa	Known RBP	3.19	□□□□□ -1.9
YDR209C	YDR209C	NOP8	Q08287	484 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR209C	YDR209C	APL5	Q08951	932 aa	Known RBP	3.19	□□□□□ -1.9
YDR209C	YDR209C	AIR2	Q12476	344 aa	Known RBP	3.19	□□□□□ -1.9
YDR209C	YDR209C	SAP190	P36123	1033 aa		3.18	□□□□□ -1.9
YDR209C	YDR209C	SIC1	P38634	284 aa		3.18	□□□□□ -1.9
YDR209C	YDR209C	CHZ1	P40019	153 aa	Predicted RBP	3.18	□□□□□ -1.9
YDR209C	YDR209C	HOS4	P40480	1083 aa		3.18	□□□□□ -1.9
YDR209C	YDR209C	SMC3	P47037	1230 aa		3.18	□□□□□ -1.9
YDR209C	YDR209C	PRP3	Q03338	469 aa	Predicted RBP	3.18	□□□□□ -1.9
YDR209C	YDR209C	YMR196W	Q04336	1088 aa		3.18	□□□□□ -1.9
YDR209C	YDR209C	NOP58	Q12499	511 aa	Known RBP	3.18	□□□□□ -1.9
YDR209C	YDR209C	PEP1	P32319	1579 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	MSH3	P25336	1018 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	OPY1	P38271	328 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	TPO2	P53283	614 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	CTR9	P89105	1077 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	RRP15	Q06511	250 aa	Predicted RBP	3.17	□□□□□ -1.9
YDR209C	YDR209C	YLL054C	Q12244	843 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	BUD4	P47136	1447 aa		3.17	□□□□□ -1.9
YDR209C	YDR209C	MDS3	P53094	1487 aa		3.16	□□□□□ -1.9
YDR209C	YDR209C	STH1	P32597	1359 aa		3.16	□□□□□ -1.9
YDR209C	YDR209C	SRP54	P20424	541 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	PRS1	P32895	427 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	RRP14	P36080	434 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	YMR124W	P39523	943 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	RPT2	P40327	437 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	DOS2	P54858	310 aa		3.16	□□□□□ -1.9
YDR209C	YDR209C	RPN7	Q06103	429 aa	Known RBP	3.16	□□□□□ -1.9
YDR209C	YDR209C	YVC1	Q12324	675 aa		3.16	□□□□□ -1.9
YDR209C	YDR209C	ISW1	P38144	1129 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	SNF7	P39929	240 aa	Known RBP	3.15	□□□□□ -1.91
YDR209C	YDR209C	RAD26	P40352	1085 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	OSW7	P43611	510 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	YJL171C	P46992	396 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	VID30	P53076	958 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	RTS3	P53289	263 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	DMA2	P53924	522 aa		3.15	□□□□□ -1.91
YDR209C	YDR209C	ECM16	Q04217	1267 aa	Known RBP	3.15	□□□□□ -1.91
YDR209C	YDR209C	CFT2	Q12102	859 aa	Predicted RBP	3.15	□□□□□ -1.91
YDR209C	YDR209C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
YDR209C	YDR209C	REV3	P14284	1504 aa		3.14	□□□□□ -1.91
YDR209C	YDR209C	TY1B-A	O13527	1196 aa	Known RBP	3.14	□□□□□ -1.91
YDR209C	YDR209C	MCM1	P11746	286 aa		3.14	□□□□□ -1.91
YDR209C	YDR209C	NPR3	P38742	1146 aa		3.14	□□□□□ -1.91
YDR209C	YDR209C	RSC8	P43609	557 aa	Known RBP	3.14	□□□□□ -1.91
YDR209C	YDR209C	KIP3	P53086	805 aa	Known RBP	3.14	□□□□□ -1.91
YDR209C	YDR209C	RCF1	Q03713	159 aa		3.14	□□□□□ -1.91
YDR209C	YDR209C	ATG2	P53855	1592 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	SUP35	P05453	685 aa	Known RBP	3.13	□□□□□ -1.91
YDR209C	YDR209C	DEP1	P31385	405 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	DSN1	P40568	576 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	LEM3	P42838	414 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	ATG36	P46983	293 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	ALD3	P54114	506 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	ERV41	Q04651	352 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	YDR341C	Q05506	607 aa	Known RBP	3.13	□□□□□ -1.91
YDR209C	YDR209C	GGA1	Q06336	557 aa		3.13	□□□□□ -1.91
YDR209C	YDR209C	TY4B-P	A0A0B7P3V8	1104 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	TAF13	P11747	167 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	DAL5	P15365	543 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	RAD51	P25454	400 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	SWI3	P32591	825 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	SLX5	P32828	619 aa	Known RBP	3.12	□□□□□ -1.91
YDR209C	YDR209C	SEC9	P40357	651 aa		3.12	□□□□□ -1.91
YDR209C	YDR209C	AIM20	P40451	204 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms