RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W NUP159P40477 1460 aa10.68□□□□□ -0.7
CDC1YDR182W ITT1Q04638 464 aa10.68□□□□□ -0.7
CDC1YDR182W VTH1P40438 1549 aa10.66□□□□□ -0.7
CDC1YDR182W VTH2P40890 1549 aa10.66□□□□□ -0.7
CDC1YDR182W MIF2P35201 549 aa10.66□□□□□ -0.7
CDC1YDR182W TSC11P40061 1430 aa10.64□□□□□ -0.71
CDC1YDR182W VPS15P22219 1454 aa10.64□□□□□ -0.71
CDC1YDR182W RPO21P04050 1733 aaKnown RBP10.63□□□□□ -0.71
CDC1YDR182W YCK3P39962 524 aa10.61□□□□□ -0.71
CDC1YDR182W MMS1Q06211 1407 aa10.58□□□□□ -0.72
CDC1YDR182W DRS2P39524 1355 aa10.56□□□□□ -0.72
CDC1YDR182W MYO4P32492 1471 aa10.54□□□□□ -0.72
CDC1YDR182W ABP1P15891 592 aaKnown RBP10.53□□□□□ -0.72
CDC1YDR182W SNQ2P32568 1501 aaKnown RBP10.52□□□□□ -0.73
CDC1YDR182W BFR2Q06631 534 aaKnown RBP10.51□□□□□ -0.73
CDC1YDR182W DIP2Q12220 943 aaPredicted RBP10.5□□□□□ -0.73
CDC1YDR182W HAA1Q12753 694 aaKnown RBP10.49□□□□□ -0.73
CDC1YDR182W YTA7P40340 1379 aa10.47□□□□□ -0.73
CDC1YDR182W IRC20Q06554 1556 aa10.45□□□□□ -0.74
CDC1YDR182W SNT2P53127 1403 aa10.45□□□□□ -0.74
CDC1YDR182W NUP170P38181 1502 aa10.44□□□□□ -0.74
CDC1YDR182W SPO14P36126 1683 aa10.43□□□□□ -0.74
CDC1YDR182W ULS1Q08562 1619 aa10.42□□□□□ -0.74
CDC1YDR182W DNF2Q12675 1612 aa10.42□□□□□ -0.74
CDC1YDR182W STH1P32597 1359 aa10.38□□□□□ -0.75
CDC1YDR182W MET10P39692 1035 aa10.37□□□□□ -0.75
CDC1YDR182W DOP1Q03921 1698 aa10.36□□□□□ -0.75
CDC1YDR182W MLP2P40457 1679 aa10.34□□□□□ -0.75
CDC1YDR182W RTT106P40161 455 aa10.34□□□□□ -0.75
CDC1YDR182W YFR006WP43590 535 aa10.34□□□□□ -0.75
CDC1YDR182W PDR12Q02785 1511 aa10.33□□□□□ -0.76
CDC1YDR182W GDB1Q06625 1536 aa10.31□□□□□ -0.76
CDC1YDR182W AVT3P36062 692 aa10.3□□□□□ -0.76
CDC1YDR182W PDR15Q04182 1529 aaKnown RBP10.28□□□□□ -0.76
CDC1YDR182W IQG1Q12280 1495 aa10.27□□□□□ -0.77
CDC1YDR182W NUP157P40064 1391 aaKnown RBP10.26□□□□□ -0.77
CDC1YDR182W PDR10P51533 1564 aa10.24□□□□□ -0.77
CDC1YDR182W SAS10Q12136 610 aaPredicted RBP10.24□□□□□ -0.77
CDC1YDR182W TRM3Q07527 1436 aa10.22□□□□□ -0.77
CDC1YDR182W YOR093CQ12275 1648 aa10.17□□□□□ -0.78
CDC1YDR182W BUD3P25558 1636 aa10.16□□□□□ -0.78
CDC1YDR182W ISW2Q08773 1120 aa10.15□□□□□ -0.78
CDC1YDR182W ARO1P08566 1588 aaKnown RBP10.15□□□□□ -0.79
CDC1YDR182W CHC1P22137 1653 aaKnown RBP10.15□□□□□ -0.79
CDC1YDR182W IFH1P39520 1085 aa10.14□□□□□ -0.79
CDC1YDR182W PRI1P10363 409 aa10.09□□□□□ -0.79
CDC1YDR182W YBT1P32386 1661 aa10.08□□□□□ -0.8
CDC1YDR182W TY3B-GQ99315 1547 aa10.07□□□□□ -0.8
CDC1YDR182W TAF7Q05021 590 aa10.06□□□□□ -0.8
CDC1YDR182W AAD16Q02895 342 aa10.05□□□□□ -0.8
CDC1YDR182W GEA1P47102 1408 aaPredicted RBP10.05□□□□□ -0.8
CDC1YDR182W DNF3Q12674 1656 aa10.03□□□□□ -0.8
CDC1YDR182W RPG1P38249 964 aaKnown RBP10.03□□□□□ -0.8
CDC1YDR182W CAT8P39113 1433 aa10.02□□□□□ -0.81
CDC1YDR182W SEC7P11075 2009 aaKnown RBP10□□□□□ -0.81
CDC1YDR182W CKB1P43639 278 aa9.98□□□□□ -0.81
CDC1YDR182W YSP2Q06681 1438 aa9.97□□□□□ -0.81
CDC1YDR182W BNR1P40450 1375 aa9.94□□□□□ -0.82
CDC1YDR182W YAP3P38749 330 aa9.9□□□□□ -0.83
CDC1YDR182W USO1P25386 1790 aa9.83□□□□□ -0.84
CDC1YDR182W MAK10Q02197 733 aa9.81□□□□□ -0.84
CDC1YDR182W SRB8P25648 1427 aa9.79□□□□□ -0.84
CDC1YDR182W URN1Q06525 465 aaKnown RBP9.74□□□□□ -0.85
CDC1YDR182W IML1P47170 1584 aa9.74□□□□□ -0.85
CDC1YDR182W TFA1P36100 482 aa9.73□□□□□ -0.85
CDC1YDR182W NUP188P52593 1655 aaKnown RBP9.72□□□□□ -0.85
CDC1YDR182W BUD31P25337 157 aaPredicted RBP9.72□□□□□ -0.85
CDC1YDR182W VMR1P38735 1592 aa9.7□□□□□ -0.86
CDC1YDR182W BUD21Q08492 214 aaPredicted RBP9.7□□□□□ -0.86
CDC1YDR182W IPL1P38991 367 aa9.68□□□□□ -0.86
CDC1YDR182W TYS1P36421 394 aaKnown RBP9.67□□□□□ -0.86
CDC1YDR182W RPL17AP05740 184 aaKnown RBP9.62□□□□□ -0.87
CDC1YDR182W THI12P42883 340 aa9.62□□□□□ -0.87
CDC1YDR182W THI5P43534 340 aa9.62□□□□□ -0.87
CDC1YDR182W RPL17BP46990 184 aaKnown RBP9.62□□□□□ -0.87
CDC1YDR182W THI11P47183 340 aa9.62□□□□□ -0.87
CDC1YDR182W THI13Q07748 340 aa9.62□□□□□ -0.87
CDC1YDR182W PDR5P33302 1511 aaKnown RBP9.62□□□□□ -0.87
CDC1YDR182W HAP1P0CE41 1502 aa9.61□□□□□ -0.87
CDC1YDR182W TY1B-NL2Q99337 1749 aaKnown RBP9.61□□□□□ -0.87
CDC1YDR182W TSR3Q12094 313 aaKnown RBP9.59□□□□□ -0.87
CDC1YDR182W YMR196WQ04336 1088 aa9.56□□□□□ -0.88
CDC1YDR182W REB1P21538 810 aa9.52□□□□□ -0.89
CDC1YDR182W IKI3Q06706 1349 aaKnown RBP9.52□□□□□ -0.89
CDC1YDR182W SSM4P40318 1319 aa9.51□□□□□ -0.89
CDC1YDR182W PDR11P40550 1411 aa9.5□□□□□ -0.89
CDC1YDR182W GCN2P15442 1659 aa9.46□□□□□ -0.9
CDC1YDR182W KRE5P22023 1365 aa9.45□□□□□ -0.9
CDC1YDR182W RIA1P53893 1110 aa9.4□□□□□ -0.9
CDC1YDR182W CFT1Q06632 1357 aaKnown RBP9.38□□□□□ -0.91
CDC1YDR182W MRX12P47084 519 aa9.37□□□□□ -0.91
CDC1YDR182W APP1P53933 587 aa9.36□□□□□ -0.91
CDC1YDR182W BCK1Q01389 1478 aa9.35□□□□□ -0.91
CDC1YDR182W YAH1Q12184 172 aaKnown RBP9.34□□□□□ -0.91
CDC1YDR182W YNR029CP53729 429 aaKnown RBP9.34□□□□□ -0.91
CDC1YDR182W NUP192P47054 1683 aa9.33□□□□□ -0.92
CDC1YDR182W PTP3P40048 928 aa9.31□□□□□ -0.92
CDC1YDR182W GLN1P32288 370 aaKnown RBP9.3□□□□□ -0.92
CDC1YDR182W RAV1P47104 1357 aa9.3□□□□□ -0.92
CDC1YDR182W CAB1Q04430 367 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms