RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W RPN1P38764 993 aaKnown RBP7.39□□□□□ -1.23
SUB2YDL084W NUG1P40010 520 aaKnown RBP7.39□□□□□ -1.23
SUB2YDL084W ENV11P53246 860 aa7.38□□□□□ -1.23
SUB2YDL084W SAS10Q12136 610 aaPredicted RBP7.37□□□□□ -1.23
SUB2YDL084W ASF1P32447 279 aa7.36□□□□□ -1.23
SUB2YDL084W ULI1P43604 169 aa7.36□□□□□ -1.23
SUB2YDL084W YLR271WQ06152 274 aa7.36□□□□□ -1.23
SUB2YDL084W LDB19Q12502 818 aa7.36□□□□□ -1.23
SUB2YDL084W SWE1P32944 819 aa7.35□□□□□ -1.23
SUB2YDL084W NOP53Q12080 455 aaKnown RBP7.35□□□□□ -1.23
SUB2YDL084W SPT2P06843 333 aaPredicted RBP7.34□□□□□ -1.23
SUB2YDL084W IOC2Q12072 812 aa7.33□□□□□ -1.24
SUB2YDL084W TCB2P48231 1178 aa7.32□□□□□ -1.24
SUB2YDL084W PSD2P53037 1138 aaKnown RBP7.32□□□□□ -1.24
SUB2YDL084W PIB1Q06651 286 aa7.32□□□□□ -1.24
SUB2YDL084W BMT6Q12291 365 aa7.31□□□□□ -1.24
SUB2YDL084W ENP1P38333 483 aaKnown RBP7.3□□□□□ -1.24
SUB2YDL084W NHA1Q99271 985 aa7.3□□□□□ -1.24
SUB2YDL084W SPT16P32558 1035 aaKnown RBP7.27□□□□□ -1.24
SUB2YDL084W TLG1Q03322 224 aa7.27□□□□□ -1.24
SUB2YDL084W MSB4Q12317 492 aa7.27□□□□□ -1.24
SUB2YDL084W MRM1P25270 412 aa7.27□□□□□ -1.25
SUB2YDL084W ABP1P15891 592 aaKnown RBP7.26□□□□□ -1.25
SUB2YDL084W EAP1P36041 632 aaKnown RBP7.26□□□□□ -1.25
SUB2YDL084W BRN1P38170 754 aa7.26□□□□□ -1.25
SUB2YDL084W MPP10P47083 593 aaKnown RBP7.26□□□□□ -1.25
SUB2YDL084W QCR6P00127 147 aa7.25□□□□□ -1.25
SUB2YDL084W RIX1P38883 763 aaPredicted RBP7.25□□□□□ -1.25
SUB2YDL084W RTS3P53289 263 aa7.24□□□□□ -1.25
SUB2YDL084W SSA1P10591 642 aaKnown RBP7.23□□□□□ -1.25
SUB2YDL084W SSA2P10592 639 aaKnown RBP7.23□□□□□ -1.25
SUB2YDL084W RNA1P11745 407 aaKnown RBP7.23□□□□□ -1.25
SUB2YDL084W OSW7P43611 510 aa7.23□□□□□ -1.25
SUB2YDL084W TPO2P53283 614 aa7.22□□□□□ -1.25
SUB2YDL084W NAB3P38996 802 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
SUB2YDL084W FUN12P39730 1002 aaKnown RBP7.21□□□□□ -1.26
SUB2YDL084W YOL036WQ08206 761 aa7.2□□□□□ -1.26
SUB2YDL084W SPT7P35177 1332 aa7.19□□□□□ -1.26
SUB2YDL084W RTG1P32607 177 aa7.19□□□□□ -1.26
SUB2YDL084W SET4P42948 560 aa7.18□□□□□ -1.26
SUB2YDL084W ATG36P46983 293 aa7.18□□□□□ -1.26
SUB2YDL084W NOP7P53261 605 aaKnown RBP7.18□□□□□ -1.26
SUB2YDL084W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
SUB2YDL084W TRP5P00931 707 aaKnown RBP7.16□□□□□ -1.26
SUB2YDL084W YMR1P47147 688 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
SUB2YDL084W PIL1P53252 339 aaKnown RBP7.15□□□□□ -1.26
SUB2YDL084W NCR1Q12200 1170 aa7.15□□□□□ -1.26
SUB2YDL084W HSC82P15108 705 aaKnown RBP7.14□□□□□ -1.27
SUB2YDL084W KIP3P53086 805 aaKnown RBP7.14□□□□□ -1.27
SUB2YDL084W YML020WQ03722 664 aa7.14□□□□□ -1.27
SUB2YDL084W FPR4Q06205 392 aaPredicted RBP7.14□□□□□ -1.27
SUB2YDL084W DBP1P24784 617 aaKnown RBP7.13□□□□□ -1.27
SUB2YDL084W SSP1P38871 571 aa7.13□□□□□ -1.27
SUB2YDL084W RPT2P40327 437 aaKnown RBP7.13□□□□□ -1.27
SUB2YDL084W YNL035CP53962 389 aaKnown RBP7.13□□□□□ -1.27
SUB2YDL084W INO80P53115 1489 aa7.13□□□□□ -1.27
SUB2YDL084W SEC61P32915 480 aa7.12□□□□□ -1.27
SUB2YDL084W VPS29P38759 282 aa7.12□□□□□ -1.27
SUB2YDL084W YMR196WQ04336 1088 aa7.12□□□□□ -1.27
SUB2YDL084W BUD21Q08492 214 aaPredicted RBP7.11□□□□□ -1.27
SUB2YDL084W NMD2P38798 1089 aaKnown RBP7.1□□□□□ -1.27
SUB2YDL084W YNL011CP53980 444 aa7.1□□□□□ -1.27
SUB2YDL084W LAM6Q08001 693 aa7.1□□□□□ -1.27
SUB2YDL084W VMA1P17255 1071 aaKnown RBP7.09□□□□□ -1.27
SUB2YDL084W CDC11P32458 415 aa7.09□□□□□ -1.27
SUB2YDL084W GEF1P37020 779 aa7.09□□□□□ -1.27
SUB2YDL084W ISW1P38144 1129 aa7.09□□□□□ -1.27
SUB2YDL084W YFR006WP43590 535 aa7.09□□□□□ -1.27
SUB2YDL084W YGR130CP53278 816 aa7.09□□□□□ -1.27
SUB2YDL084W YTA7P40340 1379 aa7.08□□□□□ -1.28
SUB2YDL084W RTG3P38165 486 aa7.08□□□□□ -1.28
SUB2YDL084W TY4A-JP47023 414 aa7.08□□□□□ -1.28
SUB2YDL084W FAR11P53917 953 aa7.08□□□□□ -1.28
SUB2YDL084W YSH1Q06224 779 aaPredicted RBP7.08□□□□□ -1.28
SUB2YDL084W SAM3Q08986 587 aa7.08□□□□□ -1.28
SUB2YDL084W HOS4P40480 1083 aa7.07□□□□□ -1.28
SUB2YDL084W YJR008WP47085 338 aa7.07□□□□□ -1.28
SUB2YDL084W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
SUB2YDL084W GRX3Q03835 250 aa7.07□□□□□ -1.28
SUB2YDL084W SPC110P32380 944 aa7.06□□□□□ -1.28
SUB2YDL084W STS1P38637 319 aa7.06□□□□□ -1.28
SUB2YDL084W CST9Q06032 482 aa7.06□□□□□ -1.28
SUB2YDL084W NOP8Q08287 484 aaPredicted RBP7.06□□□□□ -1.28
SUB2YDL084W PET111P08468 800 aa7.04□□□□□ -1.28
SUB2YDL084W TAF13P11747 167 aa7.04□□□□□ -1.28
SUB2YDL084W PDR1P12383 1068 aa7.04□□□□□ -1.28
SUB2YDL084W PEA2P40091 420 aa7.04□□□□□ -1.28
SUB2YDL084W TFG1P41895 735 aaPredicted RBP7.04□□□□□ -1.28
SUB2YDL084W ZDS1P50111 915 aaKnown RBP7.04□□□□□ -1.28
SUB2YDL084W VPS4P52917 437 aa7.04□□□□□ -1.28
SUB2YDL084W DAL5P15365 543 aa7.02□□□□□ -1.28
SUB2YDL084W SEC20P28791 383 aa7.02□□□□□ -1.28
SUB2YDL084W SSF1P38789 453 aaPredicted RBP7.02□□□□□ -1.28
SUB2YDL084W AIM21P40563 679 aa7.02□□□□□ -1.28
SUB2YDL084W MGA2P40578 1113 aa7.02□□□□□ -1.28
SUB2YDL084W NST1P53935 1240 aa7.01□□□□□ -1.29
SUB2YDL084W DOS2P54858 310 aa7.01□□□□□ -1.29
SUB2YDL084W BRE1Q07457 700 aaKnown RBP7.01□□□□□ -1.29
SUB2YDL084W RAD2P07276 1031 aa7.01□□□□□ -1.29
SUB2YDL084W SPC42P36094 363 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms