RNA–Protein interactions for RNA: YBL034C

STU1, Transcript of Component of the mitotic spindle, yeast

Gene STU1, Length 4,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STU1	YBL034C	RAD2	P07276	1031 aa		4.13	□□□□□ -1.75
STU1	YBL034C	CLB3	P24870	427 aa		4.13	□□□□□ -1.75
STU1	YBL034C	RPN7	Q06103	429 aa	Known RBP	4.13	□□□□□ -1.75
STU1	YBL034C	PET111	P08468	800 aa		4.12	□□□□□ -1.75
STU1	YBL034C	KAR3	P17119	729 aa		4.12	□□□□□ -1.75
STU1	YBL034C	MAK21	Q12176	1025 aa	Known RBP	4.12	□□□□□ -1.75
STU1	YBL034C	SPT7	P35177	1332 aa		4.12	□□□□□ -1.75
STU1	YBL034C	IKI3	Q06706	1349 aa	Known RBP	4.12	□□□□□ -1.75
STU1	YBL034C	HOS4	P40480	1083 aa		4.12	□□□□□ -1.75
STU1	YBL034C	SPT5	P27692	1063 aa	Known RBP	4.11	□□□□□ -1.75
STU1	YBL034C	RAD26	P40352	1085 aa		4.11	□□□□□ -1.75
STU1	YBL034C	TAN1	P53072	289 aa	Predicted RBP	4.11	□□□□□ -1.75
STU1	YBL034C	SMY2	P32909	740 aa	Known RBP	4.11	□□□□□ -1.75
STU1	YBL034C	PET100	P38958	111 aa		4.11	□□□□□ -1.75
STU1	YBL034C	NOC3	Q07896	663 aa	Predicted RBP	4.1	□□□□□ -1.75
STU1	YBL034C	ZUO1	P32527	433 aa	Known RBP	4.1	□□□□□ -1.75
STU1	YBL034C	JJJ1	P53863	590 aa		4.1	□□□□□ -1.75
STU1	YBL034C	CTR9	P89105	1077 aa		4.1	□□□□□ -1.75
STU1	YBL034C	TSR1	Q07381	788 aa	Known RBP	4.1	□□□□□ -1.75
STU1	YBL034C	ENV11	P53246	860 aa		4.09	□□□□□ -1.75
STU1	YBL034C	MHP1	P43638	1398 aa		4.09	□□□□□ -1.75
STU1	YBL034C	MDM38	Q08179	573 aa		4.09	□□□□□ -1.75
STU1	YBL034C	STH1	P32597	1359 aa		4.09	□□□□□ -1.75
STU1	YBL034C	TOP1	P04786	769 aa		4.09	□□□□□ -1.75
STU1	YBL034C	RPC31	P17890	251 aa		4.09	□□□□□ -1.75
STU1	YBL034C	IFH1	P39520	1085 aa		4.09	□□□□□ -1.75
STU1	YBL034C	RTT106	P40161	455 aa		4.09	□□□□□ -1.75
STU1	YBL034C	JIP3	O13555	125 aa		4.09	□□□□□ -1.76
STU1	YBL034C	URN1	Q06525	465 aa	Known RBP	4.09	□□□□□ -1.76
STU1	YBL034C	NOP53	Q12080	455 aa	Known RBP	4.09	□□□□□ -1.76
STU1	YBL034C	RSE1	Q04693	1361 aa	Known RBP	4.08	□□□□□ -1.76
STU1	YBL034C	RIO2	P40160	425 aa	Known RBP	4.08	□□□□□ -1.76
STU1	YBL034C	GIN4	Q12263	1142 aa		4.08	□□□□□ -1.76
STU1	YBL034C	LTV1	P34078	463 aa		4.08	□□□□□ -1.76
STU1	YBL034C	VPS30	Q02948	557 aa		4.08	□□□□□ -1.76
STU1	YBL034C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
STU1	YBL034C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
STU1	YBL034C	VPS27	P40343	622 aa	Known RBP	4.07	□□□□□ -1.76
STU1	YBL034C	DAL5	P15365	543 aa		4.07	□□□□□ -1.76
STU1	YBL034C	SGM1	P47166	707 aa		4.07	□□□□□ -1.76
STU1	YBL034C	VPS60	Q03390	229 aa		4.07	□□□□□ -1.76
STU1	YBL034C	NFU1	P32860	256 aa		4.06	□□□□□ -1.76
STU1	YBL034C	LSG1	P53145	640 aa	Known RBP	4.06	□□□□□ -1.76
STU1	YBL034C	NNF2	P53253	936 aa		4.06	□□□□□ -1.76
STU1	YBL034C	PUF6	Q04373	656 aa	Known RBP	4.06	□□□□□ -1.76
STU1	YBL034C	POL4	P25615	582 aa		4.06	□□□□□ -1.76
STU1	YBL034C	RPN1	P38764	993 aa	Known RBP	4.06	□□□□□ -1.76
STU1	YBL034C	EIS1	Q05050	843 aa	Known RBP	4.06	□□□□□ -1.76
STU1	YBL034C	TY4A-H	Q6Q5P6	413 aa		4.06	□□□□□ -1.76
STU1	YBL034C	HCA4	P20448	770 aa	Known RBP	4.06	□□□□□ -1.76
STU1	YBL034C	GLE1	Q12315	538 aa		4.06	□□□□□ -1.76
STU1	YBL034C	CHZ1	P40019	153 aa	Predicted RBP	4.05	□□□□□ -1.76
STU1	YBL034C	RAD9	P14737	1309 aa		4.05	□□□□□ -1.76
STU1	YBL034C	MIC60	P36112	540 aa		4.05	□□□□□ -1.76
STU1	YBL034C	NDC80	P40460	691 aa		4.05	□□□□□ -1.76
STU1	YBL034C	PAP2	P53632	584 aa	Known RBP	4.05	□□□□□ -1.76
STU1	YBL034C	ESF2	P53743	316 aa	Known RBP	4.05	□□□□□ -1.76
STU1	YBL034C	TFG2	P41896	400 aa	Predicted RBP	4.05	□□□□□ -1.76
STU1	YBL034C	PEX14	P53112	341 aa		4.05	□□□□□ -1.76
STU1	YBL034C	SAS3	P34218	831 aa		4.04	□□□□□ -1.76
STU1	YBL034C	YGR130C	P53278	816 aa		4.04	□□□□□ -1.76
STU1	YBL034C	YVC1	Q12324	675 aa		4.04	□□□□□ -1.76
STU1	YBL034C	SYH1	Q02875	849 aa	Known RBP	4.04	□□□□□ -1.76
STU1	YBL034C	PRP3	Q03338	469 aa	Predicted RBP	4.04	□□□□□ -1.76
STU1	YBL034C	RSM25	P40496	264 aa		4.03	□□□□□ -1.76
STU1	YBL034C	SMI1	P32566	505 aa		4.03	□□□□□ -1.76
STU1	YBL034C	SNF7	P39929	240 aa	Known RBP	4.03	□□□□□ -1.76
STU1	YBL034C	RPG1	P38249	964 aa	Known RBP	4.03	□□□□□ -1.76
STU1	YBL034C	CWC22	P53333	577 aa	Known RBP	4.03	□□□□□ -1.76
STU1	YBL034C	SUP35	P05453	685 aa	Known RBP	4.03	□□□□□ -1.76
STU1	YBL034C	ENP2	P48234	707 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	PIL1	P53252	339 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	IMH1	Q06704	911 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	LSP1	Q12230	341 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	RAD50	P12753	1312 aa		4.02	□□□□□ -1.77
STU1	YBL034C	LEU3	P08638	886 aa		4.02	□□□□□ -1.77
STU1	YBL034C	YGL081W	P53156	320 aa		4.02	□□□□□ -1.77
STU1	YBL034C	SPO19	Q03029	223 aa		4.02	□□□□□ -1.77
STU1	YBL034C	IOC4	Q04213	475 aa		4.02	□□□□□ -1.77
STU1	YBL034C	RRB1	Q04225	511 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	LCD1	Q04377	747 aa		4.02	□□□□□ -1.77
STU1	YBL034C	NUG1	P40010	520 aa	Known RBP	4.02	□□□□□ -1.77
STU1	YBL034C	ARP5	P53946	755 aa		4.02	□□□□□ -1.77
STU1	YBL034C	SWI3	P32591	825 aa		4.02	□□□□□ -1.77
STU1	YBL034C	IES3	Q12345	250 aa		4.02	□□□□□ -1.77
STU1	YBL034C	CLB1	P24868	471 aa		4.01	□□□□□ -1.77
STU1	YBL034C	SWC3	P31376	625 aa		4.01	□□□□□ -1.77
STU1	YBL034C	ASI1	P54074	624 aa		4.01	□□□□□ -1.77
STU1	YBL034C	VHS3	Q08438	674 aa		4.01	□□□□□ -1.77
STU1	YBL034C	RCF1	Q03713	159 aa		4.01	□□□□□ -1.77
STU1	YBL034C	SLK19	Q08581	821 aa	Known RBP	4.01	□□□□□ -1.77
STU1	YBL034C	DSN1	P40568	576 aa		4.01	□□□□□ -1.77
STU1	YBL034C	MEF1	P25039	761 aa		4	□□□□□ -1.77
STU1	YBL034C	YKR023W	P36119	530 aa	Known RBP	4	□□□□□ -1.77
STU1	YBL034C	RTF1	P53064	558 aa		4	□□□□□ -1.77
STU1	YBL034C	RUD3	Q12234	484 aa	Known RBP	4	□□□□□ -1.77
STU1	YBL034C	ESL2	P36168	1195 aa		4	□□□□□ -1.77
STU1	YBL034C	RPB2	P08518	1224 aa	Known RBP	4	□□□□□ -1.77
STU1	YBL034C	MFT1	P33441	392 aa	Known RBP	4	□□□□□ -1.77
STU1	YBL034C	MPP10	P47083	593 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms