RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C SNT2P53127 1403 aa3.75□□□□□ -1.81
PEP1YBL017C UFD4P33202 1483 aa3.73□□□□□ -1.81
PEP1YBL017C VTH1P40438 1549 aa3.73□□□□□ -1.81
PEP1YBL017C VTH2P40890 1549 aa3.73□□□□□ -1.81
PEP1YBL017C TAF2P23255 1407 aa3.73□□□□□ -1.81
PEP1YBL017C GDB1Q06625 1536 aa3.72□□□□□ -1.81
PEP1YBL017C DNF2Q12675 1612 aa3.71□□□□□ -1.82
PEP1YBL017C MMS22Q06164 1454 aa3.71□□□□□ -1.82
PEP1YBL017C LTE1P07866 1435 aa3.69□□□□□ -1.82
PEP1YBL017C VPS15P22219 1454 aa3.67□□□□□ -1.82
PEP1YBL017C TY3B-GQ99315 1547 aa3.66□□□□□ -1.82
PEP1YBL017C ARO1P08566 1588 aaKnown RBP3.66□□□□□ -1.82
PEP1YBL017C BUD3P25558 1636 aa3.66□□□□□ -1.82
PEP1YBL017C TRM3Q07527 1436 aa3.63□□□□□ -1.83
PEP1YBL017C YOR093CQ12275 1648 aa3.62□□□□□ -1.83
PEP1YBL017C SPP41P38904 1435 aa3.62□□□□□ -1.83
PEP1YBL017C IQG1Q12280 1495 aa3.62□□□□□ -1.83
PEP1YBL017C TSC11P40061 1430 aa3.61□□□□□ -1.83
PEP1YBL017C GEA2P39993 1459 aaKnown RBP3.61□□□□□ -1.83
PEP1YBL017C PDR5P33302 1511 aaKnown RBP3.6□□□□□ -1.83
PEP1YBL017C NUP159P40477 1460 aa3.59□□□□□ -1.84
PEP1YBL017C SKI3P17883 1432 aaKnown RBP3.58□□□□□ -1.84
PEP1YBL017C RSE1Q04693 1361 aaKnown RBP3.58□□□□□ -1.84
PEP1YBL017C DNF3Q12674 1656 aa3.58□□□□□ -1.84
PEP1YBL017C YTA7P40340 1379 aa3.56□□□□□ -1.84
PEP1YBL017C PDR15Q04182 1529 aaKnown RBP3.55□□□□□ -1.84
PEP1YBL017C NUP188P52593 1655 aaKnown RBP3.54□□□□□ -1.84
PEP1YBL017C CAT8P39113 1433 aa3.53□□□□□ -1.84
PEP1YBL017C TY1B-NL2Q99337 1749 aaKnown RBP3.53□□□□□ -1.84
PEP1YBL017C VMR1P38735 1592 aa3.53□□□□□ -1.85
PEP1YBL017C GCN2P15442 1659 aa3.52□□□□□ -1.85
PEP1YBL017C SEC7P11075 2009 aaKnown RBP3.52□□□□□ -1.85
PEP1YBL017C TRM732Q03496 1420 aa3.51□□□□□ -1.85
PEP1YBL017C YRF1-2P40105 1681 aa3.49□□□□□ -1.85
PEP1YBL017C NUP192P47054 1683 aa3.47□□□□□ -1.85
PEP1YBL017C IML1P47170 1584 aa3.46□□□□□ -1.86
PEP1YBL017C DRS1P32892 752 aaKnown RBP3.44□□□□□ -1.86
PEP1YBL017C STH1P32597 1359 aa3.42□□□□□ -1.86
PEP1YBL017C USO1P25386 1790 aa3.4□□□□□ -1.87
PEP1YBL017C YSP2Q06681 1438 aa3.39□□□□□ -1.87
PEP1YBL017C GEA1P47102 1408 aaPredicted RBP3.36□□□□□ -1.87
PEP1YBL017C DRS2P39524 1355 aa3.36□□□□□ -1.87
PEP1YBL017C MMS1Q06211 1407 aa3.34□□□□□ -1.87
PEP1YBL017C SRB8P25648 1427 aa3.31□□□□□ -1.88
PEP1YBL017C RRP5Q05022 1729 aaKnown RBP3.3□□□□□ -1.88
PEP1YBL017C TY4B-HP0C2J7 1802 aa3.28□□□□□ -1.88
PEP1YBL017C TY4B-JP47024 1803 aa3.28□□□□□ -1.88
PEP1YBL017C TY3B-IQ7LHG5 1498 aaKnown RBP3.28□□□□□ -1.88
PEP1YBL017C NUP157P40064 1391 aaKnown RBP3.28□□□□□ -1.89
PEP1YBL017C YIL177CP40434 1758 aa3.26□□□□□ -1.89
PEP1YBL017C YJL225CP40889 1758 aa3.26□□□□□ -1.89
PEP1YBL017C FKS3Q04952 1785 aa3.26□□□□□ -1.89
PEP1YBL017C APC1P53886 1748 aa3.25□□□□□ -1.89
PEP1YBL017C BCK1Q01389 1478 aa3.24□□□□□ -1.89
PEP1YBL017C ITT1Q04638 464 aa3.24□□□□□ -1.89
PEP1YBL017C MET10P39692 1035 aa3.24□□□□□ -1.89
PEP1YBL017C SNF2P22082 1703 aa3.23□□□□□ -1.89
PEP1YBL017C CFT1Q06632 1357 aaKnown RBP3.21□□□□□ -1.9
PEP1YBL017C YRF1-3P0CX14 1859 aa3.2□□□□□ -1.9
PEP1YBL017C YRF1-7P0CX15 1859 aa3.2□□□□□ -1.9
PEP1YBL017C YRF1-6P53819 1859 aa3.2□□□□□ -1.9
PEP1YBL017C URB1P34241 1764 aaKnown RBP3.19□□□□□ -1.9
PEP1YBL017C UTP10P42945 1769 aaKnown RBP3.19□□□□□ -1.9
PEP1YBL017C TAF7Q05021 590 aa3.18□□□□□ -1.9
PEP1YBL017C RIM15P43565 1770 aa3.17□□□□□ -1.9
PEP1YBL017C IKI3Q06706 1349 aaKnown RBP3.17□□□□□ -1.9
PEP1YBL017C PDR11P40550 1411 aa3.17□□□□□ -1.9
PEP1YBL017C BNR1P40450 1375 aa3.16□□□□□ -1.9
PEP1YBL017C MIF2P35201 549 aa3.16□□□□□ -1.9
PEP1YBL017C EDE1P34216 1381 aa3.14□□□□□ -1.91
PEP1YBL017C RAV1P47104 1357 aa3.13□□□□□ -1.91
PEP1YBL017C MLP1Q02455 1875 aaKnown RBP3.08□□□□□ -1.92
PEP1YBL017C YLL066CQ99208 1374 aa3.05□□□□□ -1.92
PEP1YBL017C SSM4P40318 1319 aa3.05□□□□□ -1.92
PEP1YBL017C RTC1Q08281 1341 aa3.05□□□□□ -1.92
PEP1YBL017C RQC2Q12532 1038 aaKnown RBP3.04□□□□□ -1.92
PEP1YBL017C YAP3P38749 330 aa3.03□□□□□ -1.92
PEP1YBL017C ADE6P38972 1358 aaKnown RBP3.02□□□□□ -1.93
PEP1YBL017C MAK10Q02197 733 aa3.01□□□□□ -1.93
PEP1YBL017C URN1Q06525 465 aaKnown RBP3□□□□□ -1.93
PEP1YBL017C FIG2P25653 1609 aa3□□□□□ -1.93
PEP1YBL017C IPL1P38991 367 aa3□□□□□ -1.93
PEP1YBL017C PSK1P31374 1356 aa2.99□□□□□ -1.93
PEP1YBL017C MTC1P47018 478 aaKnown RBP2.99□□□□□ -1.93
PEP1YBL017C YMR196WQ04336 1088 aa2.99□□□□□ -1.93
PEP1YBL017C RTT106P40161 455 aa2.98□□□□□ -1.93
PEP1YBL017C IOC4Q04213 475 aa2.98□□□□□ -1.93
PEP1YBL017C HKR1P41809 1802 aa2.98□□□□□ -1.93
PEP1YBL017C PTP3P40048 928 aa2.97□□□□□ -1.93
PEP1YBL017C YAH1Q12184 172 aaKnown RBP2.95□□□□□ -1.94
PEP1YBL017C PRP43P53131 767 aaKnown RBP2.95□□□□□ -1.94
PEP1YBL017C YML133CQ03099 1374 aa2.94□□□□□ -1.94
PEP1YBL017C YLL067CQ07888 1374 aa2.94□□□□□ -1.94
PEP1YBL017C YLR419WQ06698 1435 aaKnown RBP2.93□□□□□ -1.94
PEP1YBL017C DUR1,2P32528 1835 aaKnown RBP2.93□□□□□ -1.94
PEP1YBL017C YFR006WP43590 535 aa2.93□□□□□ -1.94
PEP1YBL017C SIR4P11978 1358 aa2.89□□□□□ -1.95
PEP1YBL017C ABP1P15891 592 aaKnown RBP2.88□□□□□ -1.95
PEP1YBL017C ROM2P51862 1356 aaKnown RBP2.87□□□□□ -1.95
PEP1YBL017C TYS1P36421 394 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms