RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W TAF2P23255 1407 aa5.32□□□□□ -1.56
NUP60YAR002W BUD4P47136 1447 aa5.32□□□□□ -1.56
NUP60YAR002W STS1P38637 319 aa5.32□□□□□ -1.56
NUP60YAR002W IFH1P39520 1085 aa5.31□□□□□ -1.56
NUP60YAR002W YFR006WP43590 535 aa5.31□□□□□ -1.56
NUP60YAR002W COQ8P27697 501 aa5.3□□□□□ -1.56
NUP60YAR002W NOP53Q12080 455 aaKnown RBP5.3□□□□□ -1.56
NUP60YAR002W ECM5Q03214 1411 aa5.29□□□□□ -1.56
NUP60YAR002W ESP1Q03018 1630 aa5.28□□□□□ -1.56
NUP60YAR002W MIF2P35201 549 aa5.28□□□□□ -1.56
NUP60YAR002W MYO2P19524 1574 aaKnown RBP5.28□□□□□ -1.56
NUP60YAR002W PIB1Q06651 286 aa5.27□□□□□ -1.57
NUP60YAR002W ATG2P53855 1592 aa5.27□□□□□ -1.57
NUP60YAR002W YPR148CQ06523 435 aa5.26□□□□□ -1.57
NUP60YAR002W RTG1P32607 177 aa5.26□□□□□ -1.57
NUP60YAR002W EAP1P36041 632 aaKnown RBP5.26□□□□□ -1.57
NUP60YAR002W NCR1Q12200 1170 aa5.26□□□□□ -1.57
NUP60YAR002W SKI3P17883 1432 aaKnown RBP5.24□□□□□ -1.57
NUP60YAR002W EDS1P38073 919 aa5.24□□□□□ -1.57
NUP60YAR002W CKB1P43639 278 aa5.24□□□□□ -1.57
NUP60YAR002W VPS70P47161 811 aa5.24□□□□□ -1.57
NUP60YAR002W VMA1P17255 1071 aaKnown RBP5.23□□□□□ -1.57
NUP60YAR002W MSB4Q12317 492 aa5.23□□□□□ -1.57
NUP60YAR002W MDS3P53094 1487 aa5.22□□□□□ -1.57
NUP60YAR002W YPK9Q12697 1472 aa5.22□□□□□ -1.57
NUP60YAR002W PEP1P32319 1579 aa5.22□□□□□ -1.57
NUP60YAR002W PTC3P34221 468 aaKnown RBP5.22□□□□□ -1.57
NUP60YAR002W POL1P13382 1468 aa5.21□□□□□ -1.58
NUP60YAR002W LEU3P08638 886 aa5.19□□□□□ -1.58
NUP60YAR002W BCK2P33306 851 aa5.19□□□□□ -1.58
NUP60YAR002W SAM3Q08986 587 aa5.19□□□□□ -1.58
NUP60YAR002W CHD1P32657 1468 aa5.18□□□□□ -1.58
NUP60YAR002W STU1P38198 1513 aa5.18□□□□□ -1.58
NUP60YAR002W TRP5P00931 707 aaKnown RBP5.17□□□□□ -1.58
NUP60YAR002W SEC61P32915 480 aa5.17□□□□□ -1.58
NUP60YAR002W GRE2Q12068 342 aaKnown RBP5.17□□□□□ -1.58
NUP60YAR002W SCC2Q04002 1493 aa5.17□□□□□ -1.58
NUP60YAR002W SPB4P25808 606 aaPredicted RBP5.16□□□□□ -1.58
NUP60YAR002W SET4P42948 560 aa5.16□□□□□ -1.58
NUP60YAR002W ATH1P48016 1211 aa5.16□□□□□ -1.58
NUP60YAR002W YNL035CP53962 389 aaKnown RBP5.16□□□□□ -1.58
NUP60YAR002W MMS22Q06164 1454 aa5.16□□□□□ -1.58
NUP60YAR002W GUT1P32190 709 aa5.15□□□□□ -1.58
NUP60YAR002W TFG1P41895 735 aaPredicted RBP5.15□□□□□ -1.58
NUP60YAR002W GYP5Q12344 894 aa5.15□□□□□ -1.58
NUP60YAR002W RPO31P04051 1460 aa5.15□□□□□ -1.59
NUP60YAR002W ABP1P15891 592 aaKnown RBP5.14□□□□□ -1.59
NUP60YAR002W LEO1P38439 464 aa5.14□□□□□ -1.59
NUP60YAR002W REF2P42073 533 aaPredicted RBP5.14□□□□□ -1.59
NUP60YAR002W YOL036WQ08206 761 aa5.14□□□□□ -1.59
NUP60YAR002W YTA7P40340 1379 aa5.14□□□□□ -1.59
NUP60YAR002W RKR1Q04781 1562 aa5.13□□□□□ -1.59
NUP60YAR002W YOR1P53049 1477 aa5.13□□□□□ -1.59
NUP60YAR002W PBS2P08018 668 aa5.12□□□□□ -1.59
NUP60YAR002W UFD4P33202 1483 aa5.12□□□□□ -1.59
NUP60YAR002W TOP2P06786 1428 aaKnown RBP5.11□□□□□ -1.59
NUP60YAR002W DSF2P38213 736 aa5.11□□□□□ -1.59
NUP60YAR002W BPT1P14772 1559 aa5.11□□□□□ -1.59
NUP60YAR002W SAP30P38429 201 aa5.1□□□□□ -1.59
NUP60YAR002W YCF1P39109 1515 aaKnown RBP5.1□□□□□ -1.59
NUP60YAR002W MYO4P32492 1471 aa5.09□□□□□ -1.59
NUP60YAR002W CHL1P22516 861 aaPredicted RBP5.09□□□□□ -1.59
NUP60YAR002W DCW1P36091 449 aa5.09□□□□□ -1.59
NUP60YAR002W SMC4Q12267 1418 aa5.09□□□□□ -1.59
NUP60YAR002W MAK21Q12176 1025 aaKnown RBP5.08□□□□□ -1.6
NUP60YAR002W HTA1P04911 132 aaKnown RBP5.08□□□□□ -1.6
NUP60YAR002W HTA2P04912 132 aa5.08□□□□□ -1.6
NUP60YAR002W YGR273CP53329 174 aa5.08□□□□□ -1.6
NUP60YAR002W COX6P00427 148 aa5.06□□□□□ -1.6
NUP60YAR002W RPN1P38764 993 aaKnown RBP5.06□□□□□ -1.6
NUP60YAR002W VHR2P40041 505 aa5.06□□□□□ -1.6
NUP60YAR002W MAM3Q12296 706 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-LR1P0C2J3 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-FP0CX63 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-GR2P0CX64 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-CP25384 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-DR2Q03494 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY1B-DR1Q03855 1755 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-DR3Q07791 1770 aaKnown RBP5.06□□□□□ -1.6
NUP60YAR002W TY2B-OR1Q12113 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-DR1Q12472 1770 aa5.06□□□□□ -1.6
NUP60YAR002W TY2B-OR2Q12501 1770 aa5.06□□□□□ -1.6
NUP60YAR002W UBP14P38237 781 aaKnown RBP5.05□□□□□ -1.6
NUP60YAR002W SOL3P38858 249 aa5.05□□□□□ -1.6
NUP60YAR002W RGA2Q06407 1009 aa5.05□□□□□ -1.6
NUP60YAR002W PRE3P38624 215 aa5.04□□□□□ -1.6
NUP60YAR002W YLR326WQ06170 240 aaKnown RBP5.04□□□□□ -1.6
NUP60YAR002W TY1B-DR3Q99231 1755 aa5.03□□□□□ -1.6
NUP60YAR002W KIC1P38692 1080 aa5.03□□□□□ -1.6
NUP60YAR002W YEL023CP39992 682 aa5.02□□□□□ -1.61
NUP60YAR002W NST1P53935 1240 aa5.02□□□□□ -1.61
NUP60YAR002W YDR090CQ03193 310 aa5.02□□□□□ -1.61
NUP60YAR002W YDL129WQ07555 291 aa5.02□□□□□ -1.61
NUP60YAR002W AI4P03878 556 aa5.01□□□□□ -1.61
NUP60YAR002W KEX1P09620 729 aa5.01□□□□□ -1.61
NUP60YAR002W MPH3P0CE00 602 aa5.01□□□□□ -1.61
NUP60YAR002W IES2P40154 320 aa5.01□□□□□ -1.61
NUP60YAR002W SNQ2P32568 1501 aaKnown RBP5.01□□□□□ -1.61
NUP60YAR002W TY2B-BQ12491 1770 aa5.01□□□□□ -1.61
NUP60YAR002W RAD54P32863 898 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms