RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 DDX10Q13206 875 aaKnown RBP23.07■■□□□ 1.28
NRXN1-229ENST00000628515 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
NRXN1-229ENST00000628515 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
NRXN1-229ENST00000628515 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
NRXN1-229ENST00000628515 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
NRXN1-229ENST00000628515 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
NRXN1-229ENST00000628515 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
NRXN1-229ENST00000628515 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
NRXN1-229ENST00000628515 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
NRXN1-229ENST00000628515 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
NRXN1-229ENST00000628515 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
NRXN1-229ENST00000628515 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
NRXN1-229ENST00000628515 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
NRXN1-229ENST00000628515 TRIM52Q96A61 297 aa22.95■■□□□ 1.26
NRXN1-229ENST00000628515 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
NRXN1-229ENST00000628515 NEFLP07196 543 aa22.93■■□□□ 1.26
NRXN1-229ENST00000628515 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
NRXN1-229ENST00000628515 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
NRXN1-229ENST00000628515 FBLN2P98095 1184 aa22.89■■□□□ 1.25
NRXN1-229ENST00000628515 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
NRXN1-229ENST00000628515 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
NRXN1-229ENST00000628515 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
NRXN1-229ENST00000628515 LAMC3Q9Y6N6 1575 aa22.87■■□□□ 1.25
NRXN1-229ENST00000628515 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.25
NRXN1-229ENST00000628515 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
NRXN1-229ENST00000628515 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
NRXN1-229ENST00000628515 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
NRXN1-229ENST00000628515 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
NRXN1-229ENST00000628515 ANP32CO43423 234 aa22.76■■□□□ 1.23
NRXN1-229ENST00000628515 RBM19Q9Y4C8 960 aaKnown RBP22.76■■□□□ 1.23
NRXN1-229ENST00000628515 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
NRXN1-229ENST00000628515 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
NRXN1-229ENST00000628515 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
NRXN1-229ENST00000628515 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
NRXN1-229ENST00000628515 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
NRXN1-229ENST00000628515 IRX6P78412 446 aaPredicted RBP22.7■■□□□ 1.22
NRXN1-229ENST00000628515 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
NRXN1-229ENST00000628515 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
NRXN1-229ENST00000628515 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
NRXN1-229ENST00000628515 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
NRXN1-229ENST00000628515 PRKCSHP14314 528 aaPredicted RBP22.57■■□□□ 1.2
NRXN1-229ENST00000628515 HNRNPUQ00839 825 aaKnown RBP eCLIP22.56■■□□□ 1.2
NRXN1-229ENST00000628515 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
NRXN1-229ENST00000628515 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
NRXN1-229ENST00000628515 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
NRXN1-229ENST00000628515 CCER2I3L3R5 266 aa22.53■■□□□ 1.2
NRXN1-229ENST00000628515 TIAM1Q13009 1591 aa22.51■■□□□ 1.19
NRXN1-229ENST00000628515 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
NRXN1-229ENST00000628515 MSH5O43196 834 aa22.46■■□□□ 1.19
NRXN1-229ENST00000628515 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
NRXN1-229ENST00000628515 CDK11AQ9UQ88 783 aaPredicted RBP22.44■■□□□ 1.18
NRXN1-229ENST00000628515 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
NRXN1-229ENST00000628515 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
NRXN1-229ENST00000628515 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
NRXN1-229ENST00000628515 PCF11O94913 1555 aaKnown RBP22.39■■□□□ 1.17
NRXN1-229ENST00000628515 CUL7Q14999 1698 aa22.37■■□□□ 1.17
NRXN1-229ENST00000628515 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
NRXN1-229ENST00000628515 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
NRXN1-229ENST00000628515 CNGB1Q14028 1251 aaPredicted RBP22.36■■□□□ 1.17
NRXN1-229ENST00000628515 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
NRXN1-229ENST00000628515 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
NRXN1-229ENST00000628515 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
NRXN1-229ENST00000628515 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
NRXN1-229ENST00000628515 WDR62O43379 1518 aa22.28■■□□□ 1.16
NRXN1-229ENST00000628515 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
NRXN1-229ENST00000628515 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
NRXN1-229ENST00000628515 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
NRXN1-229ENST00000628515 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
NRXN1-229ENST00000628515 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
NRXN1-229ENST00000628515 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
NRXN1-229ENST00000628515 FMN1Q68DA7 1419 aa22.25■■□□□ 1.15
NRXN1-229ENST00000628515 HSPA5P11021 654 aaKnown RBP22.25■■□□□ 1.15
NRXN1-229ENST00000628515 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
NRXN1-229ENST00000628515 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
NRXN1-229ENST00000628515 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
NRXN1-229ENST00000628515 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
NRXN1-229ENST00000628515 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
NRXN1-229ENST00000628515 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
NRXN1-229ENST00000628515 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
NRXN1-229ENST00000628515 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
NRXN1-229ENST00000628515 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
NRXN1-229ENST00000628515 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
NRXN1-229ENST00000628515 THOC2Q8NI27 1593 aaKnown RBP22.17■■□□□ 1.14
NRXN1-229ENST00000628515 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
NRXN1-229ENST00000628515 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
NRXN1-229ENST00000628515 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
NRXN1-229ENST00000628515 EFCAB5A4FU69 1503 aa22.16■■□□□ 1.14
NRXN1-229ENST00000628515 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
NRXN1-229ENST00000628515 IQGAP2Q13576 1575 aa22.15■■□□□ 1.14
NRXN1-229ENST00000628515 FOXD1Q16676 465 aa22.15■■□□□ 1.14
NRXN1-229ENST00000628515 GRIN2AQ12879 1464 aa22.14■■□□□ 1.14
NRXN1-229ENST00000628515 FYCO1Q9BQS8 1478 aa22.14■■□□□ 1.14
NRXN1-229ENST00000628515 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.14
NRXN1-229ENST00000628515 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.14
NRXN1-229ENST00000628515 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
NRXN1-229ENST00000628515 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
NRXN1-229ENST00000628515 NBR1Q14596 966 aa22.12■■□□□ 1.13
NRXN1-229ENST00000628515 ZNF644Q9H582 1327 aaPredicted RBP22.08■■□□□ 1.13
NRXN1-229ENST00000628515 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
NRXN1-229ENST00000628515 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms