RNA–Protein interactions for RNA: ENST00000616739.1

LMOD1-202, Transcript of leiomodin 1, humanhuman

TSL 5 BASIC

Gene LMOD1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMOD1-202ENST00000616739 FBLN2P98095 1184 aa15.45■□□□□ 0.06
LMOD1-202ENST00000616739 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
LMOD1-202ENST00000616739 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
LMOD1-202ENST00000616739 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
LMOD1-202ENST00000616739 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
LMOD1-202ENST00000616739 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
LMOD1-202ENST00000616739 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
LMOD1-202ENST00000616739 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
LMOD1-202ENST00000616739 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
LMOD1-202ENST00000616739 ITGAEP38570 1179 aa15.34■□□□□ 0.05
LMOD1-202ENST00000616739 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
LMOD1-202ENST00000616739 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.04
LMOD1-202ENST00000616739 BCANQ96GW7 911 aa15.33■□□□□ 0.04
LMOD1-202ENST00000616739 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
LMOD1-202ENST00000616739 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
LMOD1-202ENST00000616739 KIF21BO75037 1637 aa15.32■□□□□ 0.04
LMOD1-202ENST00000616739 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
LMOD1-202ENST00000616739 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
LMOD1-202ENST00000616739 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
LMOD1-202ENST00000616739 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
LMOD1-202ENST00000616739 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
LMOD1-202ENST00000616739 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
LMOD1-202ENST00000616739 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
LMOD1-202ENST00000616739 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
LMOD1-202ENST00000616739 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
LMOD1-202ENST00000616739 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
LMOD1-202ENST00000616739 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
LMOD1-202ENST00000616739 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
LMOD1-202ENST00000616739 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
LMOD1-202ENST00000616739 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
LMOD1-202ENST00000616739 FKBP8Q14318 412 aa15.15■□□□□ 0.02
LMOD1-202ENST00000616739 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
LMOD1-202ENST00000616739 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
LMOD1-202ENST00000616739 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
LMOD1-202ENST00000616739 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
LMOD1-202ENST00000616739 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
LMOD1-202ENST00000616739 CHD1O14646 1710 aa15.09■□□□□ 0.01
LMOD1-202ENST00000616739 OSCARQ8IYS5 282 aa15.08■□□□□ 0.01
LMOD1-202ENST00000616739 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ 0
LMOD1-202ENST00000616739 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
LMOD1-202ENST00000616739 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
LMOD1-202ENST00000616739 DDX10Q13206 875 aaKnown RBP15.02□□□□□ -0.01
LMOD1-202ENST00000616739 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
LMOD1-202ENST00000616739 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
LMOD1-202ENST00000616739 NEFLP07196 543 aa14.98□□□□□ -0.01
LMOD1-202ENST00000616739 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
LMOD1-202ENST00000616739 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
LMOD1-202ENST00000616739 HIRIP3Q9BW71 556 aaPredicted RBP14.96□□□□□ -0.01
LMOD1-202ENST00000616739 CLASP1Q7Z460 1538 aa14.96□□□□□ -0.01
LMOD1-202ENST00000616739 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
LMOD1-202ENST00000616739 CUL7Q14999 1698 aa14.95□□□□□ -0.02
LMOD1-202ENST00000616739 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
LMOD1-202ENST00000616739 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
LMOD1-202ENST00000616739 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
LMOD1-202ENST00000616739 MSH5O43196 834 aa14.92□□□□□ -0.02
LMOD1-202ENST00000616739 FMN1Q68DA7 1419 aa14.91□□□□□ -0.02
LMOD1-202ENST00000616739 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
LMOD1-202ENST00000616739 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
LMOD1-202ENST00000616739 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
LMOD1-202ENST00000616739 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
LMOD1-202ENST00000616739 PHLDB1Q86UU1 1377 aa14.88□□□□□ -0.03
LMOD1-202ENST00000616739 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
LMOD1-202ENST00000616739 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
LMOD1-202ENST00000616739 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
LMOD1-202ENST00000616739 NUP160Q12769 1436 aa14.86□□□□□ -0.03
LMOD1-202ENST00000616739 IRX6P78412 446 aaPredicted RBP14.86□□□□□ -0.03
LMOD1-202ENST00000616739 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
LMOD1-202ENST00000616739 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
LMOD1-202ENST00000616739 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
LMOD1-202ENST00000616739 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
LMOD1-202ENST00000616739 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
LMOD1-202ENST00000616739 IQGAP2Q13576 1575 aa14.82□□□□□ -0.04
LMOD1-202ENST00000616739 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
LMOD1-202ENST00000616739 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
LMOD1-202ENST00000616739 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
LMOD1-202ENST00000616739 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
LMOD1-202ENST00000616739 KIAA0586Q9BVV6 1533 aa14.8□□□□□ -0.04
LMOD1-202ENST00000616739 RRP7BPQ9NSQ0 103 aa14.79□□□□□ -0.04
LMOD1-202ENST00000616739 CTTNBP2Q8WZ74 1663 aa14.79□□□□□ -0.04
LMOD1-202ENST00000616739 PPP1R15AO75807 674 aaPredicted RBP14.79□□□□□ -0.04
LMOD1-202ENST00000616739 ANP32CO43423 234 aa14.79□□□□□ -0.04
LMOD1-202ENST00000616739 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
LMOD1-202ENST00000616739 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.04
LMOD1-202ENST00000616739 MAPKBP1O60336 1514 aa14.77□□□□□ -0.04
LMOD1-202ENST00000616739 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
LMOD1-202ENST00000616739 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
LMOD1-202ENST00000616739 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
LMOD1-202ENST00000616739 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
LMOD1-202ENST00000616739 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
LMOD1-202ENST00000616739 ZNF644Q9H582 1327 aaPredicted RBP14.73□□□□□ -0.05
LMOD1-202ENST00000616739 CCER2I3L3R5 266 aa14.71□□□□□ -0.06
LMOD1-202ENST00000616739 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
LMOD1-202ENST00000616739 DISP1Q96F81 1524 aa14.7□□□□□ -0.06
LMOD1-202ENST00000616739 PTPRGP23470 1445 aa14.69□□□□□ -0.06
LMOD1-202ENST00000616739 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
LMOD1-202ENST00000616739 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
LMOD1-202ENST00000616739 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
LMOD1-202ENST00000616739 EPRSP07814 1512 aaKnown RBP14.68□□□□□ -0.06
LMOD1-202ENST00000616739 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
LMOD1-202ENST00000616739 SETD5Q9C0A6 1442 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms