RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
UCA1-202ENST00000589333 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
UCA1-202ENST00000589333 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
UCA1-202ENST00000589333 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
UCA1-202ENST00000589333 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
UCA1-202ENST00000589333 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
UCA1-202ENST00000589333 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
UCA1-202ENST00000589333 CUX1P39880 1505 aa10.92□□□□□ -0.66
UCA1-202ENST00000589333 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
UCA1-202ENST00000589333 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
UCA1-202ENST00000589333 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
UCA1-202ENST00000589333 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
UCA1-202ENST00000589333 EVX2Q03828 476 aa10.88□□□□□ -0.67
UCA1-202ENST00000589333 HAX1O00165 279 aa10.87□□□□□ -0.67
UCA1-202ENST00000589333 WDR97A6NE52 1622 aa10.85□□□□□ -0.67
UCA1-202ENST00000589333 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
UCA1-202ENST00000589333 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
UCA1-202ENST00000589333 TARBP1Q13395 1621 aaKnown RBP10.81□□□□□ -0.68
UCA1-202ENST00000589333 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
UCA1-202ENST00000589333 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
UCA1-202ENST00000589333 FBLN2P98095 1184 aa10.81□□□□□ -0.68
UCA1-202ENST00000589333 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
UCA1-202ENST00000589333 CUX2O14529 1486 aa10.81□□□□□ -0.68
UCA1-202ENST00000589333 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
UCA1-202ENST00000589333 ABCA5Q8WWZ7 1642 aa10.75□□□□□ -0.69
UCA1-202ENST00000589333 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
UCA1-202ENST00000589333 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
UCA1-202ENST00000589333 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
UCA1-202ENST00000589333 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
UCA1-202ENST00000589333 PRKAR2AP13861 404 aaKnown RBP10.72□□□□□ -0.69
UCA1-202ENST00000589333 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
UCA1-202ENST00000589333 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
UCA1-202ENST00000589333 PBRM1Q86U86 1689 aa10.69□□□□□ -0.7
UCA1-202ENST00000589333 SOGA1O94964 1423 aa10.69□□□□□ -0.7
UCA1-202ENST00000589333 ZNF608Q9ULD9 1512 aaPredicted RBP10.68□□□□□ -0.7
UCA1-202ENST00000589333 SPDYE1Q8NFV5 336 aaPredicted RBP10.67□□□□□ -0.7
UCA1-202ENST00000589333 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
UCA1-202ENST00000589333 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
UCA1-202ENST00000589333 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
UCA1-202ENST00000589333 ERICH3Q5RHP9 1530 aa10.62□□□□□ -0.71
UCA1-202ENST00000589333 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
UCA1-202ENST00000589333 ADAMTS12P58397 1594 aa10.61□□□□□ -0.71
UCA1-202ENST00000589333 KIF27Q86VH2 1401 aa10.61□□□□□ -0.71
UCA1-202ENST00000589333 CUL7Q14999 1698 aa10.6□□□□□ -0.71
UCA1-202ENST00000589333 TDRD9Q8NDG6 1382 aaKnown RBP10.6□□□□□ -0.71
UCA1-202ENST00000589333 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
UCA1-202ENST00000589333 EEA1Q15075 1411 aa10.59□□□□□ -0.71
UCA1-202ENST00000589333 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
UCA1-202ENST00000589333 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
UCA1-202ENST00000589333 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
UCA1-202ENST00000589333 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
UCA1-202ENST00000589333 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
UCA1-202ENST00000589333 KIF21BO75037 1637 aa10.55□□□□□ -0.72
UCA1-202ENST00000589333 CHD1O14646 1710 aa10.54□□□□□ -0.72
UCA1-202ENST00000589333 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
UCA1-202ENST00000589333 IGF1RP08069 1367 aa10.52□□□□□ -0.72
UCA1-202ENST00000589333 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
UCA1-202ENST00000589333 SYNJ2O15056 1496 aa10.5□□□□□ -0.73
UCA1-202ENST00000589333 GABBR2O75899 941 aa10.5□□□□□ -0.73
UCA1-202ENST00000589333 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
UCA1-202ENST00000589333 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
UCA1-202ENST00000589333 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
UCA1-202ENST00000589333 CTTNBP2Q8WZ74 1663 aa10.47□□□□□ -0.73
UCA1-202ENST00000589333 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
UCA1-202ENST00000589333 CARMIL1Q5VZK9 1371 aa10.45□□□□□ -0.74
UCA1-202ENST00000589333 GOLGA3Q08378 1498 aa10.44□□□□□ -0.74
UCA1-202ENST00000589333 NUP160Q12769 1436 aa10.43□□□□□ -0.74
UCA1-202ENST00000589333 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
UCA1-202ENST00000589333 FAM9AQ8IZU1 332 aaPredicted RBP10.42□□□□□ -0.74
UCA1-202ENST00000589333 SHROOM2Q13796 1616 aa10.4□□□□□ -0.75
UCA1-202ENST00000589333 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
UCA1-202ENST00000589333 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
UCA1-202ENST00000589333 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
UCA1-202ENST00000589333 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
UCA1-202ENST00000589333 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
UCA1-202ENST00000589333 KIAA0586Q9BVV6 1533 aa10.36□□□□□ -0.75
UCA1-202ENST00000589333 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
UCA1-202ENST00000589333 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
UCA1-202ENST00000589333 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
UCA1-202ENST00000589333 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
UCA1-202ENST00000589333 LHX8Q68G74 356 aa10.31□□□□□ -0.76
UCA1-202ENST00000589333 KIAA0556O60303 1618 aa10.31□□□□□ -0.76
UCA1-202ENST00000589333 EFCAB5A4FU69 1503 aa10.3□□□□□ -0.76
UCA1-202ENST00000589333 DISP1Q96F81 1524 aa10.29□□□□□ -0.76
UCA1-202ENST00000589333 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
UCA1-202ENST00000589333 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
UCA1-202ENST00000589333 CEP162Q5TB80 1403 aa10.26□□□□□ -0.77
UCA1-202ENST00000589333 ARHGAP35Q9NRY4 1499 aa10.26□□□□□ -0.77
UCA1-202ENST00000589333 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
UCA1-202ENST00000589333 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
UCA1-202ENST00000589333 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
UCA1-202ENST00000589333 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
UCA1-202ENST00000589333 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
UCA1-202ENST00000589333 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
UCA1-202ENST00000589333 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
UCA1-202ENST00000589333 CLIP1P30622 1438 aa10.22□□□□□ -0.77
UCA1-202ENST00000589333 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
UCA1-202ENST00000589333 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
UCA1-202ENST00000589333 PCF11O94913 1555 aaKnown RBP10.19□□□□□ -0.78
UCA1-202ENST00000589333 FHOD3Q2V2M9 1422 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms