RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
UCA1-202ENST00000589333 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
UCA1-202ENST00000589333 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
UCA1-202ENST00000589333 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
UCA1-202ENST00000589333 FOXD1Q16676 465 aa16.23■□□□□ 0.19
UCA1-202ENST00000589333 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
UCA1-202ENST00000589333 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
UCA1-202ENST00000589333 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
UCA1-202ENST00000589333 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
UCA1-202ENST00000589333 MSH5O43196 834 aa15.08■□□□□ 0
UCA1-202ENST00000589333 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
UCA1-202ENST00000589333 ADRA2BP18089 450 aa15.04■□□□□ -0
UCA1-202ENST00000589333 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
UCA1-202ENST00000589333 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
UCA1-202ENST00000589333 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
UCA1-202ENST00000589333 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
UCA1-202ENST00000589333 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
UCA1-202ENST00000589333 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
UCA1-202ENST00000589333 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
UCA1-202ENST00000589333 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
UCA1-202ENST00000589333 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
UCA1-202ENST00000589333 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
UCA1-202ENST00000589333 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
UCA1-202ENST00000589333 ABCC9O60706 1549 aa12.73□□□□□ -0.37
UCA1-202ENST00000589333 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
UCA1-202ENST00000589333 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
UCA1-202ENST00000589333 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
UCA1-202ENST00000589333 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
UCA1-202ENST00000589333 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
UCA1-202ENST00000589333 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
UCA1-202ENST00000589333 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
UCA1-202ENST00000589333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.415e-9■■□□□ 11.5
UCA1-202ENST00000589333 NACADO15069 1562 aa12.47□□□□□ -0.41
UCA1-202ENST00000589333 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
UCA1-202ENST00000589333 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
UCA1-202ENST00000589333 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
UCA1-202ENST00000589333 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
UCA1-202ENST00000589333 KCNA4P22459 653 aa12.23□□□□□ -0.45
UCA1-202ENST00000589333 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
UCA1-202ENST00000589333 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
UCA1-202ENST00000589333 CAPN15O75808 1086 aa12.11□□□□□ -0.47
UCA1-202ENST00000589333 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
UCA1-202ENST00000589333 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
UCA1-202ENST00000589333 DSG3P32926 999 aa12.09□□□□□ -0.47
UCA1-202ENST00000589333 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
UCA1-202ENST00000589333 ABCB7O75027 752 aa11.9□□□□□ -0.5
UCA1-202ENST00000589333 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
UCA1-202ENST00000589333 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
UCA1-202ENST00000589333 POTEHQ6S545 545 aa11.82□□□□□ -0.52
UCA1-202ENST00000589333 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
UCA1-202ENST00000589333 CECR2Q9BXF3 1484 aa11.72□□□□□ -0.53
UCA1-202ENST00000589333 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
UCA1-202ENST00000589333 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
UCA1-202ENST00000589333 BAZ1AQ9NRL2 1556 aaPredicted RBP11.69□□□□□ -0.54
UCA1-202ENST00000589333 APLP2Q06481 763 aa11.65□□□□□ -0.54
UCA1-202ENST00000589333 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
UCA1-202ENST00000589333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
UCA1-202ENST00000589333 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
UCA1-202ENST00000589333 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
UCA1-202ENST00000589333 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
UCA1-202ENST00000589333 CC2D2AQ9P2K1 1620 aa11.59□□□□□ -0.55
UCA1-202ENST00000589333 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
UCA1-202ENST00000589333 WIZO95785 1651 aa11.55□□□□□ -0.56
UCA1-202ENST00000589333 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
UCA1-202ENST00000589333 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
UCA1-202ENST00000589333 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.56
UCA1-202ENST00000589333 POLA2Q14181 598 aa11.52□□□□□ -0.57
UCA1-202ENST00000589333 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
UCA1-202ENST00000589333 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
UCA1-202ENST00000589333 NCAPD3P42695 1498 aa11.47□□□□□ -0.57
UCA1-202ENST00000589333 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
UCA1-202ENST00000589333 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
UCA1-202ENST00000589333 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
UCA1-202ENST00000589333 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
UCA1-202ENST00000589333 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
UCA1-202ENST00000589333 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
UCA1-202ENST00000589333 ZBTB22O15209 634 aa11.31□□□□□ -0.6
UCA1-202ENST00000589333 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
UCA1-202ENST00000589333 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
UCA1-202ENST00000589333 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
UCA1-202ENST00000589333 PRDM2Q13029 1718 aa11.21□□□□□ -0.61
UCA1-202ENST00000589333 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
UCA1-202ENST00000589333 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
UCA1-202ENST00000589333 CFTRP13569 1480 aa11.15□□□□□ -0.62
UCA1-202ENST00000589333 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
UCA1-202ENST00000589333 NESP48681 1621 aa11.13□□□□□ -0.63
UCA1-202ENST00000589333 REM2Q8IYK8 340 aaPredicted RBP11.12□□□□□ -0.63
UCA1-202ENST00000589333 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
UCA1-202ENST00000589333 ZBTB12Q9Y330 459 aaPredicted RBP11.09□□□□□ -0.63
UCA1-202ENST00000589333 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
UCA1-202ENST00000589333 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
UCA1-202ENST00000589333 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
UCA1-202ENST00000589333 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
UCA1-202ENST00000589333 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
UCA1-202ENST00000589333 PDS5BQ9NTI5 1447 aa10.99□□□□□ -0.65
UCA1-202ENST00000589333 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
UCA1-202ENST00000589333 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
UCA1-202ENST00000589333 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
UCA1-202ENST00000589333 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
UCA1-202ENST00000589333 WDR62O43379 1518 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms