RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
CIRBP-212ENST00000587169 NESP48681 1621 aa24.2■■□□□ 1.47
CIRBP-212ENST00000587169 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.47
CIRBP-212ENST00000587169 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
CIRBP-212ENST00000587169 BCANQ96GW7 911 aa24.17■■□□□ 1.46
CIRBP-212ENST00000587169 SETD5Q9C0A6 1442 aa24.16■■□□□ 1.46
CIRBP-212ENST00000587169 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
CIRBP-212ENST00000587169 TSHZ2Q9NRE2 1034 aa24.11■■□□□ 1.45
CIRBP-212ENST00000587169 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
CIRBP-212ENST00000587169 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
CIRBP-212ENST00000587169 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
CIRBP-212ENST00000587169 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
CIRBP-212ENST00000587169 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
CIRBP-212ENST00000587169 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
CIRBP-212ENST00000587169 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
CIRBP-212ENST00000587169 FHOD3Q2V2M9 1422 aa24.01■■□□□ 1.43
CIRBP-212ENST00000587169 FKBP8Q14318 412 aa24.01■■□□□ 1.43
CIRBP-212ENST00000587169 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
CIRBP-212ENST00000587169 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
CIRBP-212ENST00000587169 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
CIRBP-212ENST00000587169 PCF11O94913 1555 aaKnown RBP23.95■■□□□ 1.42
CIRBP-212ENST00000587169 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
CIRBP-212ENST00000587169 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
CIRBP-212ENST00000587169 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
CIRBP-212ENST00000587169 ANP32CO43423 234 aa23.84■■□□□ 1.41
CIRBP-212ENST00000587169 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
CIRBP-212ENST00000587169 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
CIRBP-212ENST00000587169 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
CIRBP-212ENST00000587169 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
CIRBP-212ENST00000587169 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
CIRBP-212ENST00000587169 CASKIN1Q8WXD9 1431 aa23.76■■□□□ 1.39
CIRBP-212ENST00000587169 FGD6Q6ZV73 1430 aa23.74■■□□□ 1.39
CIRBP-212ENST00000587169 NEFLP07196 543 aa23.74■■□□□ 1.39
CIRBP-212ENST00000587169 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
CIRBP-212ENST00000587169 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
CIRBP-212ENST00000587169 CCER2I3L3R5 266 aa23.73■■□□□ 1.39
CIRBP-212ENST00000587169 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-212ENST00000587169 ANP32EQ9BTT0 268 aa23.7■■□□□ 1.39
CIRBP-212ENST00000587169 CCDC18Q5T9S5 1454 aa23.7■■□□□ 1.39
CIRBP-212ENST00000587169 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
CIRBP-212ENST00000587169 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
CIRBP-212ENST00000587169 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
CIRBP-212ENST00000587169 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
CIRBP-212ENST00000587169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.385e-6■■■□□ 18.7
CIRBP-212ENST00000587169 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.382e-10■■■■■ 31.7
CIRBP-212ENST00000587169 IRX6P78412 446 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-212ENST00000587169 RBM19Q9Y4C8 960 aaKnown RBP23.62■■□□□ 1.37
CIRBP-212ENST00000587169 FMN1Q68DA7 1419 aa23.62■■□□□ 1.37
CIRBP-212ENST00000587169 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
CIRBP-212ENST00000587169 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
CIRBP-212ENST00000587169 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
CIRBP-212ENST00000587169 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
CIRBP-212ENST00000587169 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
CIRBP-212ENST00000587169 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
CIRBP-212ENST00000587169 NAIPQ13075 1403 aa23.6■■□□□ 1.37
CIRBP-212ENST00000587169 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
CIRBP-212ENST00000587169 NCOA2Q15596 1464 aa23.57■■□□□ 1.36
CIRBP-212ENST00000587169 FBLN2P98095 1184 aa23.56■■□□□ 1.36
CIRBP-212ENST00000587169 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
CIRBP-212ENST00000587169 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
CIRBP-212ENST00000587169 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
CIRBP-212ENST00000587169 FOXD1Q16676 465 aa23.53■■□□□ 1.36
CIRBP-212ENST00000587169 WASHC2AQ641Q2 1341 aa23.52■■□□□ 1.36
CIRBP-212ENST00000587169 CTTNBP2Q8WZ74 1663 aa23.5■■□□□ 1.35
CIRBP-212ENST00000587169 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
CIRBP-212ENST00000587169 CUL7Q14999 1698 aa23.48■■□□□ 1.35
CIRBP-212ENST00000587169 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
CIRBP-212ENST00000587169 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
CIRBP-212ENST00000587169 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
CIRBP-212ENST00000587169 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-212ENST00000587169 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
CIRBP-212ENST00000587169 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
CIRBP-212ENST00000587169 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
CIRBP-212ENST00000587169 DENND4BO75064 1496 aaPredicted RBP23.4■■□□□ 1.34
CIRBP-212ENST00000587169 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.33
CIRBP-212ENST00000587169 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
CIRBP-212ENST00000587169 SAMD9Q5K651 1589 aa23.38■■□□□ 1.33
CIRBP-212ENST00000587169 MSH5O43196 834 aa23.37■■□□□ 1.33
CIRBP-212ENST00000587169 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
CIRBP-212ENST00000587169 KDM6BO15054 1643 aa23.35■■□□□ 1.33
CIRBP-212ENST00000587169 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-212ENST00000587169 SUPT6HQ7KZ85 1726 aaKnown RBP23.35■■□□□ 1.33
CIRBP-212ENST00000587169 UGGT2Q9NYU1 1516 aa23.34■■□□□ 1.33
CIRBP-212ENST00000587169 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
CIRBP-212ENST00000587169 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.32
CIRBP-212ENST00000587169 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
CIRBP-212ENST00000587169 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
CIRBP-212ENST00000587169 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
CIRBP-212ENST00000587169 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-212ENST00000587169 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
CIRBP-212ENST00000587169 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-212ENST00000587169 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
CIRBP-212ENST00000587169 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-212ENST00000587169 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-212ENST00000587169 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
CIRBP-212ENST00000587169 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
CIRBP-212ENST00000587169 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
CIRBP-212ENST00000587169 CCDC7Q96M83 1385 aa23.23■■□□□ 1.31
CIRBP-212ENST00000587169 LAMC3Q9Y6N6 1575 aa23.22■■□□□ 1.31
CIRBP-212ENST00000587169 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms