RNA–Protein interactions for RNA: ENST00000575022.1

FBXO39-203, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 1,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-203ENST00000575022 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
FBXO39-203ENST00000575022 SPDYE1Q8NFV5 336 aaPredicted RBP17.92■□□□□ 0.46
FBXO39-203ENST00000575022 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
FBXO39-203ENST00000575022 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
FBXO39-203ENST00000575022 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
FBXO39-203ENST00000575022 HAX1O00165 279 aa17.83■□□□□ 0.44
FBXO39-203ENST00000575022 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
FBXO39-203ENST00000575022 EVX2Q03828 476 aa17.8■□□□□ 0.44
FBXO39-203ENST00000575022 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
FBXO39-203ENST00000575022 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
FBXO39-203ENST00000575022 PRKAR2AP13861 404 aaKnown RBP17.79■□□□□ 0.44
FBXO39-203ENST00000575022 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
FBXO39-203ENST00000575022 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
FBXO39-203ENST00000575022 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
FBXO39-203ENST00000575022 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
FBXO39-203ENST00000575022 CUX1P39880 1505 aa17.68■□□□□ 0.42
FBXO39-203ENST00000575022 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
FBXO39-203ENST00000575022 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
FBXO39-203ENST00000575022 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
FBXO39-203ENST00000575022 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
FBXO39-203ENST00000575022 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
FBXO39-203ENST00000575022 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
FBXO39-203ENST00000575022 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
FBXO39-203ENST00000575022 C19orf67A6NJJ6 358 aa17.6■□□□□ 0.41
FBXO39-203ENST00000575022 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
FBXO39-203ENST00000575022 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
FBXO39-203ENST00000575022 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
FBXO39-203ENST00000575022 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
FBXO39-203ENST00000575022 WDR62O43379 1518 aa17.53■□□□□ 0.4
FBXO39-203ENST00000575022 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
FBXO39-203ENST00000575022 SOGA1O94964 1423 aa17.5■□□□□ 0.39
FBXO39-203ENST00000575022 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
FBXO39-203ENST00000575022 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
FBXO39-203ENST00000575022 CUX2O14529 1486 aa17.44■□□□□ 0.38
FBXO39-203ENST00000575022 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
FBXO39-203ENST00000575022 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
FBXO39-203ENST00000575022 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
FBXO39-203ENST00000575022 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
FBXO39-203ENST00000575022 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
FBXO39-203ENST00000575022 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
FBXO39-203ENST00000575022 FARP1Q9Y4F1 1045 aaPredicted RBP17.35■□□□□ 0.37
FBXO39-203ENST00000575022 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
FBXO39-203ENST00000575022 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
FBXO39-203ENST00000575022 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
FBXO39-203ENST00000575022 GABBR2O75899 941 aa17.31■□□□□ 0.36
FBXO39-203ENST00000575022 EEA1Q15075 1411 aa17.28■□□□□ 0.36
FBXO39-203ENST00000575022 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
FBXO39-203ENST00000575022 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
FBXO39-203ENST00000575022 WDR97A6NE52 1622 aa17.27■□□□□ 0.36
FBXO39-203ENST00000575022 IGF1RP08069 1367 aa17.26■□□□□ 0.35
FBXO39-203ENST00000575022 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
FBXO39-203ENST00000575022 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
FBXO39-203ENST00000575022 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
FBXO39-203ENST00000575022 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
FBXO39-203ENST00000575022 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
FBXO39-203ENST00000575022 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
FBXO39-203ENST00000575022 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
FBXO39-203ENST00000575022 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
FBXO39-203ENST00000575022 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
FBXO39-203ENST00000575022 PROM2Q8N271 834 aa17.12■□□□□ 0.33
FBXO39-203ENST00000575022 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
FBXO39-203ENST00000575022 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
FBXO39-203ENST00000575022 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
FBXO39-203ENST00000575022 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
FBXO39-203ENST00000575022 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
FBXO39-203ENST00000575022 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
FBXO39-203ENST00000575022 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
FBXO39-203ENST00000575022 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
FBXO39-203ENST00000575022 CUL7Q14999 1698 aa17.05■□□□□ 0.32
FBXO39-203ENST00000575022 KIF21BO75037 1637 aa17.04■□□□□ 0.32
FBXO39-203ENST00000575022 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
FBXO39-203ENST00000575022 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
FBXO39-203ENST00000575022 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
FBXO39-203ENST00000575022 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
FBXO39-203ENST00000575022 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
FBXO39-203ENST00000575022 RANGAP1P46060 587 aaPredicted RBP16.99■□□□□ 0.31
FBXO39-203ENST00000575022 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
FBXO39-203ENST00000575022 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
FBXO39-203ENST00000575022 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
FBXO39-203ENST00000575022 CLCN6P51797 869 aa16.92■□□□□ 0.3
FBXO39-203ENST00000575022 CHD1O14646 1710 aa16.87■□□□□ 0.29
FBXO39-203ENST00000575022 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
FBXO39-203ENST00000575022 NUP160Q12769 1436 aa16.85■□□□□ 0.29
FBXO39-203ENST00000575022 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
FBXO39-203ENST00000575022 LHX8Q68G74 356 aa16.83■□□□□ 0.28
FBXO39-203ENST00000575022 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
FBXO39-203ENST00000575022 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
FBXO39-203ENST00000575022 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
FBXO39-203ENST00000575022 CLIP1P30622 1438 aa16.8■□□□□ 0.28
FBXO39-203ENST00000575022 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
FBXO39-203ENST00000575022 PHF12Q96QT6 1004 aa16.79■□□□□ 0.28
FBXO39-203ENST00000575022 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
FBXO39-203ENST00000575022 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
FBXO39-203ENST00000575022 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
FBXO39-203ENST00000575022 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
FBXO39-203ENST00000575022 DCBLD2Q96PD2 775 aa16.72■□□□□ 0.27
FBXO39-203ENST00000575022 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
FBXO39-203ENST00000575022 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
FBXO39-203ENST00000575022 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
FBXO39-203ENST00000575022 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms