RNA–Protein interactions for RNA: ENST00000575022.1

FBXO39-203, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 1,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-203ENST00000575022 AEBP2Q6ZN18 517 aaPredicted RBP33.85■■■■□ 3.01
FBXO39-203ENST00000575022 CHIC1Q5VXU3 224 aa32.04■■■□□ 2.72
FBXO39-203ENST00000575022 SENP3Q9H4L4 574 aaPredicted RBP28.71■■■□□ 2.19
FBXO39-203ENST00000575022 PHF23Q9BUL5 403 aaPredicted RBP28.38■■■□□ 2.13
FBXO39-203ENST00000575022 FOXD1Q16676 465 aa26.85■■□□□ 1.89
FBXO39-203ENST00000575022 PLPPR3Q6T4P5 718 aa25.52■■□□□ 1.68
FBXO39-203ENST00000575022 PPP6R1Q9UPN7 881 aa25.16■■□□□ 1.62
FBXO39-203ENST00000575022 MSH5O43196 834 aa25.01■■□□□ 1.59
FBXO39-203ENST00000575022 ADRA2BP18089 450 aa25.01■■□□□ 1.59
FBXO39-203ENST00000575022 PIAS4Q8N2W9 510 aaPredicted RBP25■■□□□ 1.59
FBXO39-203ENST00000575022 POTEDQ86YR6 584 aa24.53■■□□□ 1.52
FBXO39-203ENST00000575022 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
FBXO39-203ENST00000575022 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
FBXO39-203ENST00000575022 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
FBXO39-203ENST00000575022 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
FBXO39-203ENST00000575022 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
FBXO39-203ENST00000575022 HOXD11P31277 338 aaPredicted RBP22■■□□□ 1.11
FBXO39-203ENST00000575022 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
FBXO39-203ENST00000575022 RNF216Q9NWF9 866 aaPredicted RBP21.78■■□□□ 1.08
FBXO39-203ENST00000575022 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
FBXO39-203ENST00000575022 CACNB1Q02641 598 aaPredicted RBP21.44■■□□□ 1.02
FBXO39-203ENST00000575022 RNF39Q9H2S5 420 aa21.44■■□□□ 1.02
FBXO39-203ENST00000575022 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
FBXO39-203ENST00000575022 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.01
FBXO39-203ENST00000575022 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
FBXO39-203ENST00000575022 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
FBXO39-203ENST00000575022 C1QBPQ07021 282 aaKnown RBP21.04■□□□□ 0.96
FBXO39-203ENST00000575022 KCNA4P22459 653 aa20.87■□□□□ 0.93
FBXO39-203ENST00000575022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
FBXO39-203ENST00000575022 ABCC9O60706 1549 aa20.71■□□□□ 0.91
FBXO39-203ENST00000575022 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
FBXO39-203ENST00000575022 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
FBXO39-203ENST00000575022 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
FBXO39-203ENST00000575022 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
FBXO39-203ENST00000575022 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
FBXO39-203ENST00000575022 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
FBXO39-203ENST00000575022 CAPN15O75808 1086 aa20.07■□□□□ 0.8
FBXO39-203ENST00000575022 DSG3P32926 999 aa20.07■□□□□ 0.8
FBXO39-203ENST00000575022 NACADO15069 1562 aa20.07■□□□□ 0.8
FBXO39-203ENST00000575022 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
FBXO39-203ENST00000575022 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
FBXO39-203ENST00000575022 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
FBXO39-203ENST00000575022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
FBXO39-203ENST00000575022 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
FBXO39-203ENST00000575022 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
FBXO39-203ENST00000575022 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
FBXO39-203ENST00000575022 APLP2Q06481 763 aa19.72■□□□□ 0.75
FBXO39-203ENST00000575022 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
FBXO39-203ENST00000575022 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
FBXO39-203ENST00000575022 ABCB7O75027 752 aa19.66■□□□□ 0.74
FBXO39-203ENST00000575022 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
FBXO39-203ENST00000575022 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
FBXO39-203ENST00000575022 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
FBXO39-203ENST00000575022 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
FBXO39-203ENST00000575022 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
FBXO39-203ENST00000575022 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
FBXO39-203ENST00000575022 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
FBXO39-203ENST00000575022 ZBTB22O15209 634 aa19.28■□□□□ 0.68
FBXO39-203ENST00000575022 POLA2Q14181 598 aa19.26■□□□□ 0.67
FBXO39-203ENST00000575022 POTEHQ6S545 545 aa19.17■□□□□ 0.66
FBXO39-203ENST00000575022 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
FBXO39-203ENST00000575022 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
FBXO39-203ENST00000575022 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
FBXO39-203ENST00000575022 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
FBXO39-203ENST00000575022 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
FBXO39-203ENST00000575022 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
FBXO39-203ENST00000575022 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
FBXO39-203ENST00000575022 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
FBXO39-203ENST00000575022 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
FBXO39-203ENST00000575022 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
FBXO39-203ENST00000575022 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
FBXO39-203ENST00000575022 WIZO95785 1651 aa18.69■□□□□ 0.58
FBXO39-203ENST00000575022 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
FBXO39-203ENST00000575022 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
FBXO39-203ENST00000575022 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
FBXO39-203ENST00000575022 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
FBXO39-203ENST00000575022 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
FBXO39-203ENST00000575022 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
FBXO39-203ENST00000575022 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
FBXO39-203ENST00000575022 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
FBXO39-203ENST00000575022 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
FBXO39-203ENST00000575022 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
FBXO39-203ENST00000575022 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
FBXO39-203ENST00000575022 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
FBXO39-203ENST00000575022 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
FBXO39-203ENST00000575022 PITPNM1O00562 1244 aa18.33■□□□□ 0.52
FBXO39-203ENST00000575022 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
FBXO39-203ENST00000575022 FBLN2P98095 1184 aa18.31■□□□□ 0.52
FBXO39-203ENST00000575022 PIP4P2Q8N4L2 257 aa18.28■□□□□ 0.52
FBXO39-203ENST00000575022 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
FBXO39-203ENST00000575022 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
FBXO39-203ENST00000575022 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
FBXO39-203ENST00000575022 FXR2P51116 673 aaKnown RBP eCLIP18.18■□□□□ 0.5
FBXO39-203ENST00000575022 SSUH2Q9Y2M2 353 aa18.12■□□□□ 0.49
FBXO39-203ENST00000575022 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
FBXO39-203ENST00000575022 NESP48681 1621 aa18.05■□□□□ 0.48
FBXO39-203ENST00000575022 CFTRP13569 1480 aa18.04■□□□□ 0.48
FBXO39-203ENST00000575022 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
FBXO39-203ENST00000575022 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
FBXO39-203ENST00000575022 SP7Q8TDD2 431 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms