RNA–Protein interactions for RNA: ENST00000567618.5

SCAPER-218, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-218ENST00000567618 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
SCAPER-218ENST00000567618 ERICH3Q5RHP9 1530 aa11.66□□□□□ -0.54
SCAPER-218ENST00000567618 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
SCAPER-218ENST00000567618 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
SCAPER-218ENST00000567618 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCAPER-218ENST00000567618 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
SCAPER-218ENST00000567618 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
SCAPER-218ENST00000567618 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-218ENST00000567618 CUL7Q14999 1698 aa11.6□□□□□ -0.55
SCAPER-218ENST00000567618 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
SCAPER-218ENST00000567618 CEP162Q5TB80 1403 aa11.58□□□□□ -0.56
SCAPER-218ENST00000567618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.564e-9■■■■■ 29.1
SCAPER-218ENST00000567618 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
SCAPER-218ENST00000567618 CLIP1P30622 1438 aa11.53□□□□□ -0.56
SCAPER-218ENST00000567618 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
SCAPER-218ENST00000567618 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
SCAPER-218ENST00000567618 MAGI1Q96QZ7 1491 aaPredicted RBP11.52□□□□□ -0.56
SCAPER-218ENST00000567618 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
SCAPER-218ENST00000567618 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
SCAPER-218ENST00000567618 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
SCAPER-218ENST00000567618 FBLN2P98095 1184 aa11.49□□□□□ -0.57
SCAPER-218ENST00000567618 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
SCAPER-218ENST00000567618 SYNJ2O15056 1496 aa11.48□□□□□ -0.57
SCAPER-218ENST00000567618 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
SCAPER-218ENST00000567618 KIAA0586Q9BVV6 1533 aa11.42□□□□□ -0.58
SCAPER-218ENST00000567618 APLP2Q06481 763 aa11.42□□□□□ -0.58
SCAPER-218ENST00000567618 POTEHQ6S545 545 aa11.42□□□□□ -0.58
SCAPER-218ENST00000567618 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
SCAPER-218ENST00000567618 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
SCAPER-218ENST00000567618 VPS8Q8N3P4 1428 aa11.41□□□□□ -0.58
SCAPER-218ENST00000567618 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
SCAPER-218ENST00000567618 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
SCAPER-218ENST00000567618 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
SCAPER-218ENST00000567618 NUP160Q12769 1436 aa11.38□□□□□ -0.59
SCAPER-218ENST00000567618 JPH4Q96JJ6 628 aa11.38□□□□□ -0.59
SCAPER-218ENST00000567618 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
SCAPER-218ENST00000567618 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
SCAPER-218ENST00000567618 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
SCAPER-218ENST00000567618 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
SCAPER-218ENST00000567618 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
SCAPER-218ENST00000567618 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
SCAPER-218ENST00000567618 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
SCAPER-218ENST00000567618 DSG3P32926 999 aa11.32□□□□□ -0.6
SCAPER-218ENST00000567618 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
SCAPER-218ENST00000567618 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
SCAPER-218ENST00000567618 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
SCAPER-218ENST00000567618 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
SCAPER-218ENST00000567618 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-218ENST00000567618 CHD1O14646 1710 aa11.29□□□□□ -0.6
SCAPER-218ENST00000567618 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
SCAPER-218ENST00000567618 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-218ENST00000567618 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.6
SCAPER-218ENST00000567618 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
SCAPER-218ENST00000567618 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
SCAPER-218ENST00000567618 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
SCAPER-218ENST00000567618 PRG4Q92954 1404 aaPredicted RBP11.25□□□□□ -0.61
SCAPER-218ENST00000567618 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
SCAPER-218ENST00000567618 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
SCAPER-218ENST00000567618 CAPN15O75808 1086 aa11.23□□□□□ -0.61
SCAPER-218ENST00000567618 KANK4Q5T7N3 995 aaPredicted RBP11.23□□□□□ -0.61
SCAPER-218ENST00000567618 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
SCAPER-218ENST00000567618 PTPRGP23470 1445 aa11.2□□□□□ -0.62
SCAPER-218ENST00000567618 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
SCAPER-218ENST00000567618 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
SCAPER-218ENST00000567618 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
SCAPER-218ENST00000567618 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
SCAPER-218ENST00000567618 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
SCAPER-218ENST00000567618 CCDC18Q5T9S5 1454 aa11.17□□□□□ -0.62
SCAPER-218ENST00000567618 LRRC9Q6ZRR7 1453 aa11.17□□□□□ -0.62
SCAPER-218ENST00000567618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
SCAPER-218ENST00000567618 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
SCAPER-218ENST00000567618 HECW1Q76N89 1606 aa11.15□□□□□ -0.62
SCAPER-218ENST00000567618 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
SCAPER-218ENST00000567618 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
SCAPER-218ENST00000567618 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
SCAPER-218ENST00000567618 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
SCAPER-218ENST00000567618 PLEKHD1A6NEE1 506 aa11.12□□□□□ -0.63
SCAPER-218ENST00000567618 NUP153P49790 1475 aaKnown RBP11.12□□□□□ -0.63
SCAPER-218ENST00000567618 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
SCAPER-218ENST00000567618 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
SCAPER-218ENST00000567618 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
SCAPER-218ENST00000567618 ABCA8O94911 1581 aa11.11□□□□□ -0.63
SCAPER-218ENST00000567618 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
SCAPER-218ENST00000567618 ATP10BO94823 1461 aa11.07□□□□□ -0.64
SCAPER-218ENST00000567618 LRRIQ1Q96JM4 1722 aa11.07□□□□□ -0.64
SCAPER-218ENST00000567618 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
SCAPER-218ENST00000567618 EHBP1L1Q8N3D4 1523 aa11.06□□□□□ -0.64
SCAPER-218ENST00000567618 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
SCAPER-218ENST00000567618 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
SCAPER-218ENST00000567618 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
SCAPER-218ENST00000567618 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
SCAPER-218ENST00000567618 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
SCAPER-218ENST00000567618 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
SCAPER-218ENST00000567618 TROQ12816 1431 aaPredicted RBP11.03□□□□□ -0.64
SCAPER-218ENST00000567618 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCAPER-218ENST00000567618 SUPT6HQ7KZ85 1726 aaKnown RBP11.03□□□□□ -0.64
SCAPER-218ENST00000567618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCAPER-218ENST00000567618 FAM50AQ14320 339 aaKnown RBP11.02□□□□□ -0.65
SCAPER-218ENST00000567618 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
SCAPER-218ENST00000567618 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms