RNA–Protein interactions for RNA: ENST00000567618.5

SCAPER-218, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-218ENST00000567618 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
SCAPER-218ENST00000567618 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
SCAPER-218ENST00000567618 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
SCAPER-218ENST00000567618 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
SCAPER-218ENST00000567618 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
SCAPER-218ENST00000567618 FOXD1Q16676 465 aa15.2■□□□□ 0.02
SCAPER-218ENST00000567618 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
SCAPER-218ENST00000567618 CCDC180Q9P1Z9 1646 aa14.49□□□□□ -0.09
SCAPER-218ENST00000567618 MSH5O43196 834 aa14.36□□□□□ -0.11
SCAPER-218ENST00000567618 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
SCAPER-218ENST00000567618 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
SCAPER-218ENST00000567618 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
SCAPER-218ENST00000567618 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
SCAPER-218ENST00000567618 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
SCAPER-218ENST00000567618 ADRA2BP18089 450 aa13.81□□□□□ -0.2
SCAPER-218ENST00000567618 ABCC9O60706 1549 aa13.8□□□□□ -0.2
SCAPER-218ENST00000567618 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
SCAPER-218ENST00000567618 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
SCAPER-218ENST00000567618 NACADO15069 1562 aa13.58□□□□□ -0.24
SCAPER-218ENST00000567618 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
SCAPER-218ENST00000567618 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
SCAPER-218ENST00000567618 SCRIBQ14160 1630 aa13.27□□□□□ -0.29
SCAPER-218ENST00000567618 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
SCAPER-218ENST00000567618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCAPER-218ENST00000567618 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
SCAPER-218ENST00000567618 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
SCAPER-218ENST00000567618 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
SCAPER-218ENST00000567618 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
SCAPER-218ENST00000567618 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
SCAPER-218ENST00000567618 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
SCAPER-218ENST00000567618 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
SCAPER-218ENST00000567618 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
SCAPER-218ENST00000567618 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
SCAPER-218ENST00000567618 WIZO95785 1651 aa12.66□□□□□ -0.38
SCAPER-218ENST00000567618 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
SCAPER-218ENST00000567618 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
SCAPER-218ENST00000567618 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
SCAPER-218ENST00000567618 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
SCAPER-218ENST00000567618 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
SCAPER-218ENST00000567618 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
SCAPER-218ENST00000567618 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
SCAPER-218ENST00000567618 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
SCAPER-218ENST00000567618 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
SCAPER-218ENST00000567618 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
SCAPER-218ENST00000567618 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
SCAPER-218ENST00000567618 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
SCAPER-218ENST00000567618 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
SCAPER-218ENST00000567618 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
SCAPER-218ENST00000567618 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
SCAPER-218ENST00000567618 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
SCAPER-218ENST00000567618 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
SCAPER-218ENST00000567618 CFTRP13569 1480 aa12.22□□□□□ -0.45
SCAPER-218ENST00000567618 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
SCAPER-218ENST00000567618 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
SCAPER-218ENST00000567618 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
SCAPER-218ENST00000567618 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
SCAPER-218ENST00000567618 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
SCAPER-218ENST00000567618 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
SCAPER-218ENST00000567618 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
SCAPER-218ENST00000567618 NESP48681 1621 aa12.06□□□□□ -0.48
SCAPER-218ENST00000567618 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
SCAPER-218ENST00000567618 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
SCAPER-218ENST00000567618 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
SCAPER-218ENST00000567618 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
SCAPER-218ENST00000567618 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
SCAPER-218ENST00000567618 SYNJ1O43426 1573 aa11.98□□□□□ -0.49
SCAPER-218ENST00000567618 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
SCAPER-218ENST00000567618 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
SCAPER-218ENST00000567618 CUX1P39880 1505 aa11.96□□□□□ -0.49
SCAPER-218ENST00000567618 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
SCAPER-218ENST00000567618 EEA1Q15075 1411 aa11.94□□□□□ -0.5
SCAPER-218ENST00000567618 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
SCAPER-218ENST00000567618 SOGA1O94964 1423 aa11.91□□□□□ -0.5
SCAPER-218ENST00000567618 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
SCAPER-218ENST00000567618 TOPBP1Q92547 1522 aa11.9□□□□□ -0.5
SCAPER-218ENST00000567618 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
SCAPER-218ENST00000567618 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
SCAPER-218ENST00000567618 URB2Q14146 1524 aaKnown RBP11.87□□□□□ -0.51
SCAPER-218ENST00000567618 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
SCAPER-218ENST00000567618 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
SCAPER-218ENST00000567618 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
SCAPER-218ENST00000567618 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
SCAPER-218ENST00000567618 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
SCAPER-218ENST00000567618 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
SCAPER-218ENST00000567618 CUX2O14529 1486 aa11.79□□□□□ -0.52
SCAPER-218ENST00000567618 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
SCAPER-218ENST00000567618 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
SCAPER-218ENST00000567618 WDR62O43379 1518 aa11.77□□□□□ -0.52
SCAPER-218ENST00000567618 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
SCAPER-218ENST00000567618 IGF1RP08069 1367 aa11.76□□□□□ -0.53
SCAPER-218ENST00000567618 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
SCAPER-218ENST00000567618 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
SCAPER-218ENST00000567618 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
SCAPER-218ENST00000567618 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.53
SCAPER-218ENST00000567618 GOLGA3Q08378 1498 aa11.71□□□□□ -0.53
SCAPER-218ENST00000567618 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
SCAPER-218ENST00000567618 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
SCAPER-218ENST00000567618 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
SCAPER-218ENST00000567618 KIF21BO75037 1637 aa11.7□□□□□ -0.54
SCAPER-218ENST00000567618 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms