RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-211ENST00000555929 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
PCNX4-211ENST00000555929 IGF1RP08069 1367 aa12.5□□□□□ -0.41
PCNX4-211ENST00000555929 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
PCNX4-211ENST00000555929 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
PCNX4-211ENST00000555929 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
PCNX4-211ENST00000555929 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
PCNX4-211ENST00000555929 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
PCNX4-211ENST00000555929 EEA1Q15075 1411 aa12.45□□□□□ -0.42
PCNX4-211ENST00000555929 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
PCNX4-211ENST00000555929 MAGI1Q96QZ7 1491 aaPredicted RBP12.42□□□□□ -0.42
PCNX4-211ENST00000555929 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
PCNX4-211ENST00000555929 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
PCNX4-211ENST00000555929 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
PCNX4-211ENST00000555929 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
PCNX4-211ENST00000555929 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
PCNX4-211ENST00000555929 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
PCNX4-211ENST00000555929 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
PCNX4-211ENST00000555929 CUL7Q14999 1698 aa12.35□□□□□ -0.43
PCNX4-211ENST00000555929 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
PCNX4-211ENST00000555929 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
PCNX4-211ENST00000555929 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
PCNX4-211ENST00000555929 CAPN15O75808 1086 aa12.34□□□□□ -0.43
PCNX4-211ENST00000555929 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-211ENST00000555929 CHD1O14646 1710 aa12.3□□□□□ -0.44
PCNX4-211ENST00000555929 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
PCNX4-211ENST00000555929 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
PCNX4-211ENST00000555929 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
PCNX4-211ENST00000555929 APLP2Q06481 763 aa12.27□□□□□ -0.45
PCNX4-211ENST00000555929 NUP160Q12769 1436 aa12.26□□□□□ -0.45
PCNX4-211ENST00000555929 KIF21BO75037 1637 aa12.26□□□□□ -0.45
PCNX4-211ENST00000555929 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
PCNX4-211ENST00000555929 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
PCNX4-211ENST00000555929 TTBK1Q5TCY1 1321 aaPredicted RBP12.23□□□□□ -0.45
PCNX4-211ENST00000555929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
PCNX4-211ENST00000555929 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
PCNX4-211ENST00000555929 KIAA0586Q9BVV6 1533 aa12.22□□□□□ -0.45
PCNX4-211ENST00000555929 DSG3P32926 999 aa12.22□□□□□ -0.45
PCNX4-211ENST00000555929 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
PCNX4-211ENST00000555929 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
PCNX4-211ENST00000555929 PRG4Q92954 1404 aaPredicted RBP12.18□□□□□ -0.46
PCNX4-211ENST00000555929 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
PCNX4-211ENST00000555929 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
PCNX4-211ENST00000555929 IQGAP2Q13576 1575 aa12.17□□□□□ -0.46
PCNX4-211ENST00000555929 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
PCNX4-211ENST00000555929 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
PCNX4-211ENST00000555929 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-211ENST00000555929 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-211ENST00000555929 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
PCNX4-211ENST00000555929 CLIP1P30622 1438 aa12.11□□□□□ -0.47
PCNX4-211ENST00000555929 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
PCNX4-211ENST00000555929 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
PCNX4-211ENST00000555929 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
PCNX4-211ENST00000555929 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
PCNX4-211ENST00000555929 ARHGEF11O15085 1522 aa12.08□□□□□ -0.48
PCNX4-211ENST00000555929 ATP1B4Q9UN42 357 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-211ENST00000555929 DISP1Q96F81 1524 aa12.07□□□□□ -0.48
PCNX4-211ENST00000555929 PTPRGP23470 1445 aa12.07□□□□□ -0.48
PCNX4-211ENST00000555929 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
PCNX4-211ENST00000555929 SHROOM2Q13796 1616 aa12.07□□□□□ -0.48
PCNX4-211ENST00000555929 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
PCNX4-211ENST00000555929 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
PCNX4-211ENST00000555929 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
PCNX4-211ENST00000555929 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
PCNX4-211ENST00000555929 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
PCNX4-211ENST00000555929 ARID3CA6NKF2 412 aa12.03□□□□□ -0.48
PCNX4-211ENST00000555929 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
PCNX4-211ENST00000555929 ABCB7O75027 752 aa12.01□□□□□ -0.49
PCNX4-211ENST00000555929 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
PCNX4-211ENST00000555929 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
PCNX4-211ENST00000555929 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
PCNX4-211ENST00000555929 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
PCNX4-211ENST00000555929 FMN1Q68DA7 1419 aa11.97□□□□□ -0.49
PCNX4-211ENST00000555929 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.49
PCNX4-211ENST00000555929 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
PCNX4-211ENST00000555929 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
PCNX4-211ENST00000555929 POTEHQ6S545 545 aa11.93□□□□□ -0.5
PCNX4-211ENST00000555929 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
PCNX4-211ENST00000555929 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
PCNX4-211ENST00000555929 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
PCNX4-211ENST00000555929 ABCA8O94911 1581 aa11.88□□□□□ -0.51
PCNX4-211ENST00000555929 RAPGEF6Q8TEU7 1601 aa11.88□□□□□ -0.51
PCNX4-211ENST00000555929 UHRF1BP1LA0JNW5 1464 aa11.88□□□□□ -0.51
PCNX4-211ENST00000555929 KCNH8Q96L42 1107 aa11.87□□□□□ -0.51
PCNX4-211ENST00000555929 NUP153P49790 1475 aaKnown RBP11.87□□□□□ -0.51
PCNX4-211ENST00000555929 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
PCNX4-211ENST00000555929 PLEKHD1A6NEE1 506 aa11.86□□□□□ -0.51
PCNX4-211ENST00000555929 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
PCNX4-211ENST00000555929 PCF11O94913 1555 aaKnown RBP11.86□□□□□ -0.51
PCNX4-211ENST00000555929 ATP10BO94823 1461 aa11.85□□□□□ -0.51
PCNX4-211ENST00000555929 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
PCNX4-211ENST00000555929 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
PCNX4-211ENST00000555929 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
PCNX4-211ENST00000555929 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
PCNX4-211ENST00000555929 EPRSP07814 1512 aaKnown RBP11.83□□□□□ -0.52
PCNX4-211ENST00000555929 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
PCNX4-211ENST00000555929 KDM5BQ9UGL1 1544 aa11.82□□□□□ -0.52
PCNX4-211ENST00000555929 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
PCNX4-211ENST00000555929 CCDC18Q5T9S5 1454 aa11.8□□□□□ -0.52
PCNX4-211ENST00000555929 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms