RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
CCDC65-203ENST00000547861 FAM9AQ8IZU1 332 aaPredicted RBP13.16□□□□□ -0.3
CCDC65-203ENST00000547861 CUX1P39880 1505 aa13.16□□□□□ -0.3
CCDC65-203ENST00000547861 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
CCDC65-203ENST00000547861 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
CCDC65-203ENST00000547861 CHMP7Q8WUX9 453 aaPredicted RBP13.1□□□□□ -0.31
CCDC65-203ENST00000547861 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
CCDC65-203ENST00000547861 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
CCDC65-203ENST00000547861 EEA1Q15075 1411 aa13.09□□□□□ -0.31
CCDC65-203ENST00000547861 GRIN2BQ13224 1484 aa13.08□□□□□ -0.31
CCDC65-203ENST00000547861 DSG3P32926 999 aa13.08□□□□□ -0.32
CCDC65-203ENST00000547861 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
CCDC65-203ENST00000547861 CAPN15O75808 1086 aa13.08□□□□□ -0.32
CCDC65-203ENST00000547861 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
CCDC65-203ENST00000547861 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
CCDC65-203ENST00000547861 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
CCDC65-203ENST00000547861 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
CCDC65-203ENST00000547861 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
CCDC65-203ENST00000547861 KIF21BO75037 1637 aa13.03□□□□□ -0.32
CCDC65-203ENST00000547861 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
CCDC65-203ENST00000547861 KCNA4P22459 653 aa13.02□□□□□ -0.32
CCDC65-203ENST00000547861 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
CCDC65-203ENST00000547861 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
CCDC65-203ENST00000547861 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
CCDC65-203ENST00000547861 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
CCDC65-203ENST00000547861 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
CCDC65-203ENST00000547861 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
CCDC65-203ENST00000547861 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
CCDC65-203ENST00000547861 ADAMTS12P58397 1594 aa12.9□□□□□ -0.34
CCDC65-203ENST00000547861 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
CCDC65-203ENST00000547861 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
CCDC65-203ENST00000547861 POTEHQ6S545 545 aa12.88□□□□□ -0.35
CCDC65-203ENST00000547861 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
CCDC65-203ENST00000547861 ERCC6L2Q5T890 1561 aa12.87□□□□□ -0.35
CCDC65-203ENST00000547861 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
CCDC65-203ENST00000547861 APLP2Q06481 763 aa12.87□□□□□ -0.35
CCDC65-203ENST00000547861 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
CCDC65-203ENST00000547861 NUP160Q12769 1436 aa12.86□□□□□ -0.35
CCDC65-203ENST00000547861 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
CCDC65-203ENST00000547861 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
CCDC65-203ENST00000547861 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
CCDC65-203ENST00000547861 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
CCDC65-203ENST00000547861 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
CCDC65-203ENST00000547861 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
CCDC65-203ENST00000547861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
CCDC65-203ENST00000547861 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
CCDC65-203ENST00000547861 UBTFP17480 764 aaKnown RBP12.77□□□□□ -0.36
CCDC65-203ENST00000547861 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
CCDC65-203ENST00000547861 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
CCDC65-203ENST00000547861 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
CCDC65-203ENST00000547861 ABCB7O75027 752 aa12.74□□□□□ -0.37
CCDC65-203ENST00000547861 CLIP1P30622 1438 aa12.72□□□□□ -0.37
CCDC65-203ENST00000547861 CUL7Q14999 1698 aa12.72□□□□□ -0.37
CCDC65-203ENST00000547861 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
CCDC65-203ENST00000547861 IGF1RP08069 1367 aa12.69□□□□□ -0.38
CCDC65-203ENST00000547861 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
CCDC65-203ENST00000547861 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
CCDC65-203ENST00000547861 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
CCDC65-203ENST00000547861 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
CCDC65-203ENST00000547861 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC65-203ENST00000547861 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
CCDC65-203ENST00000547861 HRCP23327 699 aa12.62□□□□□ -0.39
CCDC65-203ENST00000547861 FAM69CQ0P6D2 419 aa12.62□□□□□ -0.39
CCDC65-203ENST00000547861 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
CCDC65-203ENST00000547861 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
CCDC65-203ENST00000547861 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
CCDC65-203ENST00000547861 TTBK1Q5TCY1 1321 aaPredicted RBP12.59□□□□□ -0.39
CCDC65-203ENST00000547861 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
CCDC65-203ENST00000547861 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
CCDC65-203ENST00000547861 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
CCDC65-203ENST00000547861 PTPRGP23470 1445 aa12.56□□□□□ -0.4
CCDC65-203ENST00000547861 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
CCDC65-203ENST00000547861 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
CCDC65-203ENST00000547861 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
CCDC65-203ENST00000547861 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
CCDC65-203ENST00000547861 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
CCDC65-203ENST00000547861 CFAP43Q8NDM7 1665 aa12.51□□□□□ -0.41
CCDC65-203ENST00000547861 EFCAB5A4FU69 1503 aa12.51□□□□□ -0.41
CCDC65-203ENST00000547861 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
CCDC65-203ENST00000547861 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
CCDC65-203ENST00000547861 ABCC2Q92887 1545 aa12.48□□□□□ -0.41
CCDC65-203ENST00000547861 DISP1Q96F81 1524 aa12.48□□□□□ -0.41
CCDC65-203ENST00000547861 SAMD9Q5K651 1589 aa12.48□□□□□ -0.41
CCDC65-203ENST00000547861 KDM6BO15054 1643 aa12.46□□□□□ -0.41
CCDC65-203ENST00000547861 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
CCDC65-203ENST00000547861 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
CCDC65-203ENST00000547861 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
CCDC65-203ENST00000547861 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
CCDC65-203ENST00000547861 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
CCDC65-203ENST00000547861 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
CCDC65-203ENST00000547861 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
CCDC65-203ENST00000547861 POLA2Q14181 598 aa12.42□□□□□ -0.42
CCDC65-203ENST00000547861 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
CCDC65-203ENST00000547861 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
CCDC65-203ENST00000547861 GLI2P10070 1586 aa12.4□□□□□ -0.42
CCDC65-203ENST00000547861 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
CCDC65-203ENST00000547861 PPRC1Q5VV67 1664 aaKnown RBP12.39□□□□□ -0.43
CCDC65-203ENST00000547861 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
CCDC65-203ENST00000547861 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
CCDC65-203ENST00000547861 FYCO1Q9BQS8 1478 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms