RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
CACNB3-204ENST00000547230 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CACNB3-204ENST00000547230 PHLDB1Q86UU1 1377 aa18.19■□□□□ 0.5
CACNB3-204ENST00000547230 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
CACNB3-204ENST00000547230 PCF11O94913 1555 aaKnown RBP18.14■□□□□ 0.49
CACNB3-204ENST00000547230 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
CACNB3-204ENST00000547230 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
CACNB3-204ENST00000547230 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
CACNB3-204ENST00000547230 FGD5Q6ZNL6 1462 aa18.11■□□□□ 0.49
CACNB3-204ENST00000547230 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
CACNB3-204ENST00000547230 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
CACNB3-204ENST00000547230 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
CACNB3-204ENST00000547230 BCANQ96GW7 911 aa18.06■□□□□ 0.48
CACNB3-204ENST00000547230 FKBP8Q14318 412 aa18.02■□□□□ 0.48
CACNB3-204ENST00000547230 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
CACNB3-204ENST00000547230 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.48
CACNB3-204ENST00000547230 TIMELESSQ9UNS1 1208 aa18.01■□□□□ 0.47
CACNB3-204ENST00000547230 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
CACNB3-204ENST00000547230 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
CACNB3-204ENST00000547230 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
CACNB3-204ENST00000547230 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
CACNB3-204ENST00000547230 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
CACNB3-204ENST00000547230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.96■□□□□ 0.46
CACNB3-204ENST00000547230 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
CACNB3-204ENST00000547230 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
CACNB3-204ENST00000547230 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
CACNB3-204ENST00000547230 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNB3-204ENST00000547230 CTTNBP2Q8WZ74 1663 aa17.91■□□□□ 0.46
CACNB3-204ENST00000547230 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
CACNB3-204ENST00000547230 ANP32CO43423 234 aa17.91■□□□□ 0.46
CACNB3-204ENST00000547230 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
CACNB3-204ENST00000547230 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
CACNB3-204ENST00000547230 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.46
CACNB3-204ENST00000547230 NEFLP07196 543 aa17.89■□□□□ 0.45
CACNB3-204ENST00000547230 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
CACNB3-204ENST00000547230 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
CACNB3-204ENST00000547230 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
CACNB3-204ENST00000547230 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
CACNB3-204ENST00000547230 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
CACNB3-204ENST00000547230 CUL7Q14999 1698 aa17.87■□□□□ 0.45
CACNB3-204ENST00000547230 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
CACNB3-204ENST00000547230 PTPRKQ15262 1439 aa17.86■□□□□ 0.45
CACNB3-204ENST00000547230 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
CACNB3-204ENST00000547230 HFM1A2PYH4 1435 aa17.84■□□□□ 0.45
CACNB3-204ENST00000547230 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
CACNB3-204ENST00000547230 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
CACNB3-204ENST00000547230 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
CACNB3-204ENST00000547230 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
CACNB3-204ENST00000547230 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
CACNB3-204ENST00000547230 RBM19Q9Y4C8 960 aaKnown RBP17.81■□□□□ 0.44
CACNB3-204ENST00000547230 KDM5BQ9UGL1 1544 aa17.81■□□□□ 0.44
CACNB3-204ENST00000547230 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
CACNB3-204ENST00000547230 NAIPQ13075 1403 aa17.79■□□□□ 0.44
CACNB3-204ENST00000547230 SAMD9Q5K651 1589 aa17.77■□□□□ 0.43
CACNB3-204ENST00000547230 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
CACNB3-204ENST00000547230 MYOM3Q5VTT5 1437 aa17.75■□□□□ 0.43
CACNB3-204ENST00000547230 SUPT6HQ7KZ85 1726 aaKnown RBP17.74■□□□□ 0.43
CACNB3-204ENST00000547230 GRIN2BQ13224 1484 aa17.73■□□□□ 0.43
CACNB3-204ENST00000547230 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
CACNB3-204ENST00000547230 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.42
CACNB3-204ENST00000547230 NESP48681 1621 aa17.7■□□□□ 0.42
CACNB3-204ENST00000547230 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
CACNB3-204ENST00000547230 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
CACNB3-204ENST00000547230 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
CACNB3-204ENST00000547230 HECW1Q76N89 1606 aa17.67■□□□□ 0.42
CACNB3-204ENST00000547230 DENND4BO75064 1496 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-204ENST00000547230 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
CACNB3-204ENST00000547230 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
CACNB3-204ENST00000547230 ARHGEF11O15085 1522 aa17.66■□□□□ 0.42
CACNB3-204ENST00000547230 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
CACNB3-204ENST00000547230 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
CACNB3-204ENST00000547230 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-204ENST00000547230 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
CACNB3-204ENST00000547230 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
CACNB3-204ENST00000547230 KDM6BO15054 1643 aa17.63■□□□□ 0.41
CACNB3-204ENST00000547230 MSH5O43196 834 aa17.62■□□□□ 0.41
CACNB3-204ENST00000547230 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
CACNB3-204ENST00000547230 TCOF1Q13428 1488 aaKnown RBP17.62■□□□□ 0.41
CACNB3-204ENST00000547230 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
CACNB3-204ENST00000547230 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
CACNB3-204ENST00000547230 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
CACNB3-204ENST00000547230 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
CACNB3-204ENST00000547230 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
CACNB3-204ENST00000547230 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
CACNB3-204ENST00000547230 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
CACNB3-204ENST00000547230 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
CACNB3-204ENST00000547230 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNB3-204ENST00000547230 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-204ENST00000547230 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
CACNB3-204ENST00000547230 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
CACNB3-204ENST00000547230 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
CACNB3-204ENST00000547230 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
CACNB3-204ENST00000547230 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
CACNB3-204ENST00000547230 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
CACNB3-204ENST00000547230 EPRSP07814 1512 aaKnown RBP17.49■□□□□ 0.39
CACNB3-204ENST00000547230 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
CACNB3-204ENST00000547230 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
CACNB3-204ENST00000547230 FOXD1Q16676 465 aa17.48■□□□□ 0.39
CACNB3-204ENST00000547230 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-204ENST00000547230 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms