RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
CLPB-209ENST00000538039 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.84
CLPB-209ENST00000538039 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.84
CLPB-209ENST00000538039 SETD5Q9C0A6 1442 aa20.32■□□□□ 0.84
CLPB-209ENST00000538039 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
CLPB-209ENST00000538039 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
CLPB-209ENST00000538039 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
CLPB-209ENST00000538039 BCANQ96GW7 911 aa20.26■□□□□ 0.83
CLPB-209ENST00000538039 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
CLPB-209ENST00000538039 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
CLPB-209ENST00000538039 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
CLPB-209ENST00000538039 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
CLPB-209ENST00000538039 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
CLPB-209ENST00000538039 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
CLPB-209ENST00000538039 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
CLPB-209ENST00000538039 MYT1Q01538 1121 aa20.19■□□□□ 0.82
CLPB-209ENST00000538039 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
CLPB-209ENST00000538039 FKBP8Q14318 412 aa20.13■□□□□ 0.81
CLPB-209ENST00000538039 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
CLPB-209ENST00000538039 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
CLPB-209ENST00000538039 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
CLPB-209ENST00000538039 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
CLPB-209ENST00000538039 NESP48681 1621 aa20.05■□□□□ 0.8
CLPB-209ENST00000538039 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
CLPB-209ENST00000538039 CASKIN1Q8WXD9 1431 aa20.02■□□□□ 0.8
CLPB-209ENST00000538039 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.81e-6■■■■■ 33.8
CLPB-209ENST00000538039 LRRIQ1Q96JM4 1722 aa20.01■□□□□ 0.79
CLPB-209ENST00000538039 FYCO1Q9BQS8 1478 aa20.01■□□□□ 0.79
CLPB-209ENST00000538039 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
CLPB-209ENST00000538039 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
CLPB-209ENST00000538039 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
CLPB-209ENST00000538039 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
CLPB-209ENST00000538039 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
CLPB-209ENST00000538039 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
CLPB-209ENST00000538039 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CLPB-209ENST00000538039 KDM5BQ9UGL1 1544 aa19.94■□□□□ 0.78
CLPB-209ENST00000538039 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
CLPB-209ENST00000538039 ANP32CO43423 234 aa19.93■□□□□ 0.78
CLPB-209ENST00000538039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLPB-209ENST00000538039 CTTNBP2Q8WZ74 1663 aa19.91■□□□□ 0.78
CLPB-209ENST00000538039 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
CLPB-209ENST00000538039 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
CLPB-209ENST00000538039 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
CLPB-209ENST00000538039 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
CLPB-209ENST00000538039 NAIPQ13075 1403 aa19.9■□□□□ 0.78
CLPB-209ENST00000538039 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
CLPB-209ENST00000538039 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.78
CLPB-209ENST00000538039 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
CLPB-209ENST00000538039 MTUS2Q5JR59 1369 aa19.89■□□□□ 0.77
CLPB-209ENST00000538039 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
CLPB-209ENST00000538039 UACAQ9BZF9 1416 aa19.87■□□□□ 0.77
CLPB-209ENST00000538039 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
CLPB-209ENST00000538039 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
CLPB-209ENST00000538039 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
CLPB-209ENST00000538039 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
CLPB-209ENST00000538039 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
CLPB-209ENST00000538039 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
CLPB-209ENST00000538039 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
CLPB-209ENST00000538039 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
CLPB-209ENST00000538039 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
CLPB-209ENST00000538039 FMN1Q68DA7 1419 aa19.84■□□□□ 0.77
CLPB-209ENST00000538039 CUL7Q14999 1698 aa19.83■□□□□ 0.77
CLPB-209ENST00000538039 KDM6BO15054 1643 aa19.83■□□□□ 0.76
CLPB-209ENST00000538039 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
CLPB-209ENST00000538039 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
CLPB-209ENST00000538039 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
CLPB-209ENST00000538039 SAMD9Q5K651 1589 aa19.8■□□□□ 0.76
CLPB-209ENST00000538039 FOXD1Q16676 465 aa19.8■□□□□ 0.76
CLPB-209ENST00000538039 C11orf95C9JLR9 678 aaPredicted RBP19.79■□□□□ 0.76
CLPB-209ENST00000538039 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
CLPB-209ENST00000538039 HSPA5P11021 654 aaKnown RBP19.78■□□□□ 0.76
CLPB-209ENST00000538039 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLPB-209ENST00000538039 NEFLP07196 543 aa19.75■□□□□ 0.75
CLPB-209ENST00000538039 MSH5O43196 834 aa19.74■□□□□ 0.75
CLPB-209ENST00000538039 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
CLPB-209ENST00000538039 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
CLPB-209ENST00000538039 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
CLPB-209ENST00000538039 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
CLPB-209ENST00000538039 SUPT6HQ7KZ85 1726 aaKnown RBP19.71■□□□□ 0.75
CLPB-209ENST00000538039 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
CLPB-209ENST00000538039 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
CLPB-209ENST00000538039 EHBP1L1Q8N3D4 1523 aa19.66■□□□□ 0.74
CLPB-209ENST00000538039 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
CLPB-209ENST00000538039 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
CLPB-209ENST00000538039 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
CLPB-209ENST00000538039 TCOF1Q13428 1488 aaKnown RBP19.61■□□□□ 0.73
CLPB-209ENST00000538039 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
CLPB-209ENST00000538039 GCC2Q8IWJ2 1684 aa19.6■□□□□ 0.73
CLPB-209ENST00000538039 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.73
CLPB-209ENST00000538039 HECW1Q76N89 1606 aa19.58■□□□□ 0.73
CLPB-209ENST00000538039 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.72
CLPB-209ENST00000538039 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.72
CLPB-209ENST00000538039 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
CLPB-209ENST00000538039 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
CLPB-209ENST00000538039 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
CLPB-209ENST00000538039 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
CLPB-209ENST00000538039 CNTLNQ9NXG0 1405 aa19.55■□□□□ 0.72
CLPB-209ENST00000538039 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
CLPB-209ENST00000538039 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
CLPB-209ENST00000538039 NCOA1Q15788 1441 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms