RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.21
RDX-205ENST00000528556 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
RDX-205ENST00000528556 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
RDX-205ENST00000528556 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
RDX-205ENST00000528556 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
RDX-205ENST00000528556 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
RDX-205ENST00000528556 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
RDX-205ENST00000528556 FBLN2P98095 1184 aa13.65□□□□□ -0.22
RDX-205ENST00000528556 IGF1RP08069 1367 aa13.65□□□□□ -0.22
RDX-205ENST00000528556 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
RDX-205ENST00000528556 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
RDX-205ENST00000528556 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
RDX-205ENST00000528556 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
RDX-205ENST00000528556 CUL7Q14999 1698 aa13.62□□□□□ -0.23
RDX-205ENST00000528556 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
RDX-205ENST00000528556 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
RDX-205ENST00000528556 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
RDX-205ENST00000528556 ZBTB22O15209 634 aa13.6□□□□□ -0.23
RDX-205ENST00000528556 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
RDX-205ENST00000528556 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
RDX-205ENST00000528556 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
RDX-205ENST00000528556 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
RDX-205ENST00000528556 KIF21BO75037 1637 aa13.57□□□□□ -0.24
RDX-205ENST00000528556 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
RDX-205ENST00000528556 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
RDX-205ENST00000528556 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
RDX-205ENST00000528556 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
RDX-205ENST00000528556 DSG3P32926 999 aa13.52□□□□□ -0.25
RDX-205ENST00000528556 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
RDX-205ENST00000528556 CAPN15O75808 1086 aa13.47□□□□□ -0.25
RDX-205ENST00000528556 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
RDX-205ENST00000528556 CHD1O14646 1710 aa13.45□□□□□ -0.26
RDX-205ENST00000528556 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
RDX-205ENST00000528556 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
RDX-205ENST00000528556 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
RDX-205ENST00000528556 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
RDX-205ENST00000528556 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
RDX-205ENST00000528556 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
RDX-205ENST00000528556 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
RDX-205ENST00000528556 CLIP1P30622 1438 aa13.37□□□□□ -0.27
RDX-205ENST00000528556 NUP160Q12769 1436 aa13.37□□□□□ -0.27
RDX-205ENST00000528556 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
RDX-205ENST00000528556 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
RDX-205ENST00000528556 TTBK1Q5TCY1 1321 aaPredicted RBP13.34□□□□□ -0.27
RDX-205ENST00000528556 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
RDX-205ENST00000528556 POTEHQ6S545 545 aa13.32□□□□□ -0.28
RDX-205ENST00000528556 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
RDX-205ENST00000528556 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
RDX-205ENST00000528556 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
RDX-205ENST00000528556 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
RDX-205ENST00000528556 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
RDX-205ENST00000528556 UGGT2Q9NYU1 1516 aa13.26□□□□□ -0.29
RDX-205ENST00000528556 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
RDX-205ENST00000528556 ABCB7O75027 752 aa13.25□□□□□ -0.29
RDX-205ENST00000528556 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
RDX-205ENST00000528556 APLP2Q06481 763 aa13.24□□□□□ -0.29
RDX-205ENST00000528556 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
RDX-205ENST00000528556 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
RDX-205ENST00000528556 SAMD9Q5K651 1589 aa13.22□□□□□ -0.29
RDX-205ENST00000528556 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
RDX-205ENST00000528556 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
RDX-205ENST00000528556 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
RDX-205ENST00000528556 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
RDX-205ENST00000528556 PTPRGP23470 1445 aa13.18□□□□□ -0.3
RDX-205ENST00000528556 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
RDX-205ENST00000528556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
RDX-205ENST00000528556 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
RDX-205ENST00000528556 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
RDX-205ENST00000528556 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
RDX-205ENST00000528556 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
RDX-205ENST00000528556 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
RDX-205ENST00000528556 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
RDX-205ENST00000528556 HECW1Q76N89 1606 aa13.09□□□□□ -0.31
RDX-205ENST00000528556 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
RDX-205ENST00000528556 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
RDX-205ENST00000528556 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
RDX-205ENST00000528556 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
RDX-205ENST00000528556 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
RDX-205ENST00000528556 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
RDX-205ENST00000528556 PLB1Q6P1J6 1458 aa13.07□□□□□ -0.32
RDX-205ENST00000528556 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
RDX-205ENST00000528556 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
RDX-205ENST00000528556 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
RDX-205ENST00000528556 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
RDX-205ENST00000528556 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
RDX-205ENST00000528556 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
RDX-205ENST00000528556 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
RDX-205ENST00000528556 ABCA8O94911 1581 aa13.03□□□□□ -0.32
RDX-205ENST00000528556 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
RDX-205ENST00000528556 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
RDX-205ENST00000528556 EPRSP07814 1512 aaKnown RBP13□□□□□ -0.33
RDX-205ENST00000528556 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
RDX-205ENST00000528556 NUP153P49790 1475 aaKnown RBP12.99□□□□□ -0.33
RDX-205ENST00000528556 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
RDX-205ENST00000528556 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
RDX-205ENST00000528556 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
RDX-205ENST00000528556 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
RDX-205ENST00000528556 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
RDX-205ENST00000528556 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
RDX-205ENST00000528556 ATP10BO94823 1461 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms