RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
RDX-205ENST00000528556 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
RDX-205ENST00000528556 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
RDX-205ENST00000528556 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
RDX-205ENST00000528556 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
RDX-205ENST00000528556 FOXD1Q16676 465 aa18.16■□□□□ 0.5
RDX-205ENST00000528556 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
RDX-205ENST00000528556 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
RDX-205ENST00000528556 MSH5O43196 834 aa16.9■□□□□ 0.3
RDX-205ENST00000528556 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
RDX-205ENST00000528556 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
RDX-205ENST00000528556 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
RDX-205ENST00000528556 ADRA2BP18089 450 aa16.75■□□□□ 0.27
RDX-205ENST00000528556 ABCC9O60706 1549 aa16.45■□□□□ 0.22
RDX-205ENST00000528556 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
RDX-205ENST00000528556 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
RDX-205ENST00000528556 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
RDX-205ENST00000528556 NACADO15069 1562 aa15.98■□□□□ 0.15
RDX-205ENST00000528556 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
RDX-205ENST00000528556 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
RDX-205ENST00000528556 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
RDX-205ENST00000528556 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
RDX-205ENST00000528556 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
RDX-205ENST00000528556 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
RDX-205ENST00000528556 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
RDX-205ENST00000528556 BICRAQ9NZM4 1560 aa15.34■□□□□ 0.05
RDX-205ENST00000528556 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
RDX-205ENST00000528556 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
RDX-205ENST00000528556 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ -0
RDX-205ENST00000528556 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
RDX-205ENST00000528556 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
RDX-205ENST00000528556 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
RDX-205ENST00000528556 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
RDX-205ENST00000528556 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
RDX-205ENST00000528556 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
RDX-205ENST00000528556 WIZO95785 1651 aa14.84□□□□□ -0.03
RDX-205ENST00000528556 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
RDX-205ENST00000528556 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
RDX-205ENST00000528556 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
RDX-205ENST00000528556 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
RDX-205ENST00000528556 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
RDX-205ENST00000528556 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
RDX-205ENST00000528556 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
RDX-205ENST00000528556 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
RDX-205ENST00000528556 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
RDX-205ENST00000528556 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
RDX-205ENST00000528556 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
RDX-205ENST00000528556 KCNA4P22459 653 aa14.68□□□□□ -0.06
RDX-205ENST00000528556 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
RDX-205ENST00000528556 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
RDX-205ENST00000528556 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
RDX-205ENST00000528556 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
RDX-205ENST00000528556 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
RDX-205ENST00000528556 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
RDX-205ENST00000528556 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
RDX-205ENST00000528556 CFTRP13569 1480 aa14.31□□□□□ -0.12
RDX-205ENST00000528556 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
RDX-205ENST00000528556 NESP48681 1621 aa14.3□□□□□ -0.12
RDX-205ENST00000528556 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
RDX-205ENST00000528556 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
RDX-205ENST00000528556 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
RDX-205ENST00000528556 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
RDX-205ENST00000528556 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
RDX-205ENST00000528556 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
RDX-205ENST00000528556 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
RDX-205ENST00000528556 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
RDX-205ENST00000528556 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
RDX-205ENST00000528556 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
RDX-205ENST00000528556 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
RDX-205ENST00000528556 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
RDX-205ENST00000528556 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
RDX-205ENST00000528556 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
RDX-205ENST00000528556 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
RDX-205ENST00000528556 CUX1P39880 1505 aa14□□□□□ -0.17
RDX-205ENST00000528556 TOP2BQ02880 1626 aa14□□□□□ -0.17
RDX-205ENST00000528556 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
RDX-205ENST00000528556 TOPBP1Q92547 1522 aa14□□□□□ -0.17
RDX-205ENST00000528556 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
RDX-205ENST00000528556 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
RDX-205ENST00000528556 WDR62O43379 1518 aa13.95□□□□□ -0.18
RDX-205ENST00000528556 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
RDX-205ENST00000528556 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
RDX-205ENST00000528556 SOGA1O94964 1423 aa13.91□□□□□ -0.18
RDX-205ENST00000528556 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
RDX-205ENST00000528556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.183e-6■□□□□ 9.6
RDX-205ENST00000528556 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
RDX-205ENST00000528556 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
RDX-205ENST00000528556 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
RDX-205ENST00000528556 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
RDX-205ENST00000528556 CUX2O14529 1486 aa13.84□□□□□ -0.19
RDX-205ENST00000528556 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
RDX-205ENST00000528556 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
RDX-205ENST00000528556 EEA1Q15075 1411 aa13.8□□□□□ -0.2
RDX-205ENST00000528556 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
RDX-205ENST00000528556 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
RDX-205ENST00000528556 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
RDX-205ENST00000528556 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
RDX-205ENST00000528556 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
RDX-205ENST00000528556 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
RDX-205ENST00000528556 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms