RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
CKAP5-203ENST00000525248 FBLN2P98095 1184 aa16.51■□□□□ 0.23
CKAP5-203ENST00000525248 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
CKAP5-203ENST00000525248 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
CKAP5-203ENST00000525248 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
CKAP5-203ENST00000525248 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
CKAP5-203ENST00000525248 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
CKAP5-203ENST00000525248 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
CKAP5-203ENST00000525248 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
CKAP5-203ENST00000525248 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
CKAP5-203ENST00000525248 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
CKAP5-203ENST00000525248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
CKAP5-203ENST00000525248 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
CKAP5-203ENST00000525248 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
CKAP5-203ENST00000525248 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
CKAP5-203ENST00000525248 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
CKAP5-203ENST00000525248 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
CKAP5-203ENST00000525248 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
CKAP5-203ENST00000525248 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
CKAP5-203ENST00000525248 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
CKAP5-203ENST00000525248 BIVM-ERCC5R4GMW8 1640 aa16.35■□□□□ 0.21
CKAP5-203ENST00000525248 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
CKAP5-203ENST00000525248 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CKAP5-203ENST00000525248 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
CKAP5-203ENST00000525248 CAPN15O75808 1086 aa16.31■□□□□ 0.2
CKAP5-203ENST00000525248 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
CKAP5-203ENST00000525248 APLP2Q06481 763 aa16.28■□□□□ 0.2
CKAP5-203ENST00000525248 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
CKAP5-203ENST00000525248 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
CKAP5-203ENST00000525248 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
CKAP5-203ENST00000525248 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
CKAP5-203ENST00000525248 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
CKAP5-203ENST00000525248 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
CKAP5-203ENST00000525248 NUP160Q12769 1436 aa16.17■□□□□ 0.18
CKAP5-203ENST00000525248 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
CKAP5-203ENST00000525248 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
CKAP5-203ENST00000525248 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
CKAP5-203ENST00000525248 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
CKAP5-203ENST00000525248 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
CKAP5-203ENST00000525248 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
CKAP5-203ENST00000525248 DSG3P32926 999 aa16.01■□□□□ 0.15
CKAP5-203ENST00000525248 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
CKAP5-203ENST00000525248 ABCB7O75027 752 aa16■□□□□ 0.15
CKAP5-203ENST00000525248 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CKAP5-203ENST00000525248 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
CKAP5-203ENST00000525248 IGF1RP08069 1367 aa15.97■□□□□ 0.15
CKAP5-203ENST00000525248 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
CKAP5-203ENST00000525248 KIAA0586Q9BVV6 1533 aa15.91■□□□□ 0.14
CKAP5-203ENST00000525248 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
CKAP5-203ENST00000525248 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
CKAP5-203ENST00000525248 POLA2Q14181 598 aa15.84■□□□□ 0.13
CKAP5-203ENST00000525248 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
CKAP5-203ENST00000525248 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
CKAP5-203ENST00000525248 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
CKAP5-203ENST00000525248 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
CKAP5-203ENST00000525248 RAPGEF2Q9Y4G8 1499 aa15.77■□□□□ 0.11
CKAP5-203ENST00000525248 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
CKAP5-203ENST00000525248 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
CKAP5-203ENST00000525248 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
CKAP5-203ENST00000525248 PTPRGP23470 1445 aa15.75■□□□□ 0.11
CKAP5-203ENST00000525248 DIP2BQ9P265 1576 aa15.75■□□□□ 0.11
CKAP5-203ENST00000525248 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
CKAP5-203ENST00000525248 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
CKAP5-203ENST00000525248 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
CKAP5-203ENST00000525248 UGGT2Q9NYU1 1516 aa15.69■□□□□ 0.1
CKAP5-203ENST00000525248 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
CKAP5-203ENST00000525248 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
CKAP5-203ENST00000525248 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
CKAP5-203ENST00000525248 UACAQ9BZF9 1416 aa15.64■□□□□ 0.09
CKAP5-203ENST00000525248 UHRF1BP1LA0JNW5 1464 aa15.63■□□□□ 0.09
CKAP5-203ENST00000525248 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
CKAP5-203ENST00000525248 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
CKAP5-203ENST00000525248 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
CKAP5-203ENST00000525248 KDM6BO15054 1643 aa15.6■□□□□ 0.09
CKAP5-203ENST00000525248 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
CKAP5-203ENST00000525248 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
CKAP5-203ENST00000525248 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
CKAP5-203ENST00000525248 KDM5BQ9UGL1 1544 aa15.57■□□□□ 0.08
CKAP5-203ENST00000525248 GLI2P10070 1586 aa15.53■□□□□ 0.08
CKAP5-203ENST00000525248 EPRSP07814 1512 aaKnown RBP15.53■□□□□ 0.08
CKAP5-203ENST00000525248 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.08
CKAP5-203ENST00000525248 ABCA8O94911 1581 aa15.51■□□□□ 0.07
CKAP5-203ENST00000525248 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
CKAP5-203ENST00000525248 WDR7Q9Y4E6 1490 aa15.5■□□□□ 0.07
CKAP5-203ENST00000525248 MAP3K4Q9Y6R4 1608 aa15.49■□□□□ 0.07
CKAP5-203ENST00000525248 EEA1Q15075 1411 aa15.45■□□□□ 0.06
CKAP5-203ENST00000525248 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
CKAP5-203ENST00000525248 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
CKAP5-203ENST00000525248 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
CKAP5-203ENST00000525248 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
CKAP5-203ENST00000525248 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
CKAP5-203ENST00000525248 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
CKAP5-203ENST00000525248 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
CKAP5-203ENST00000525248 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
CKAP5-203ENST00000525248 KIF21BO75037 1637 aa15.37■□□□□ 0.05
CKAP5-203ENST00000525248 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
CKAP5-203ENST00000525248 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
CKAP5-203ENST00000525248 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
CKAP5-203ENST00000525248 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
CKAP5-203ENST00000525248 ATP10BO94823 1461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms