RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-223ENST00000515854 SYNJ1O43426 1573 aa7.33□□□□□ -1.24
ATP2C1-223ENST00000515854 FAM9AQ8IZU1 332 aaPredicted RBP7.32□□□□□ -1.24
ATP2C1-223ENST00000515854 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 SOGA1O94964 1423 aa7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 EEA1Q15075 1411 aa7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 POTEB2H3BUK9 544 aa7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 BIVM-ERCC5R4GMW8 1640 aa7.3□□□□□ -1.24
ATP2C1-223ENST00000515854 PRDM2Q13029 1718 aa7.29□□□□□ -1.24
ATP2C1-223ENST00000515854 CUX1P39880 1505 aa7.27□□□□□ -1.25
ATP2C1-223ENST00000515854 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
ATP2C1-223ENST00000515854 RUSC2Q8N2Y8 1516 aa7.27□□□□□ -1.25
ATP2C1-223ENST00000515854 LAMC3Q9Y6N6 1575 aa7.26□□□□□ -1.25
ATP2C1-223ENST00000515854 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
ATP2C1-223ENST00000515854 FANCD2Q9BXW9 1451 aa7.25□□□□□ -1.25
ATP2C1-223ENST00000515854 NESP48681 1621 aa7.25□□□□□ -1.25
ATP2C1-223ENST00000515854 CDAN1Q8IWY9 1227 aa7.24□□□□□ -1.25
ATP2C1-223ENST00000515854 OSCARQ8IYS5 282 aa7.24□□□□□ -1.25
ATP2C1-223ENST00000515854 PDS5BQ9NTI5 1447 aa7.21□□□□□ -1.25
ATP2C1-223ENST00000515854 SLC4A2P04920 1241 aa7.21□□□□□ -1.26
ATP2C1-223ENST00000515854 CLCN6P51797 869 aa7.21□□□□□ -1.26
ATP2C1-223ENST00000515854 DNMBPQ6XZF7 1577 aa7.2□□□□□ -1.26
ATP2C1-223ENST00000515854 TNIKQ9UKE5 1360 aa7.2□□□□□ -1.26
ATP2C1-223ENST00000515854 GOLGA3Q08378 1498 aa7.19□□□□□ -1.26
ATP2C1-223ENST00000515854 CEP164Q9UPV0 1460 aa7.19□□□□□ -1.26
ATP2C1-223ENST00000515854 KIF21BO75037 1637 aa7.19□□□□□ -1.26
ATP2C1-223ENST00000515854 KIF27Q86VH2 1401 aa7.18□□□□□ -1.26
ATP2C1-223ENST00000515854 FGD5Q6ZNL6 1462 aa7.18□□□□□ -1.26
ATP2C1-223ENST00000515854 TOPBP1Q92547 1522 aa7.18□□□□□ -1.26
ATP2C1-223ENST00000515854 MMRN1Q13201 1228 aa7.18□□□□□ -1.26
ATP2C1-223ENST00000515854 ZBTB12Q9Y330 459 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-223ENST00000515854 PRXQ9BXM0 1461 aa7.17□□□□□ -1.26
ATP2C1-223ENST00000515854 URB2Q14146 1524 aaKnown RBP7.17□□□□□ -1.26
ATP2C1-223ENST00000515854 CUX2O14529 1486 aa7.15□□□□□ -1.27
ATP2C1-223ENST00000515854 POLA1P09884 1462 aaPredicted RBP7.15□□□□□ -1.27
ATP2C1-223ENST00000515854 IGF1RP08069 1367 aa7.14□□□□□ -1.27
ATP2C1-223ENST00000515854 UBTFP17480 764 aaKnown RBP7.14□□□□□ -1.27
ATP2C1-223ENST00000515854 ERICH3Q5RHP9 1530 aa7.14□□□□□ -1.27
ATP2C1-223ENST00000515854 ABCA10Q8WWZ4 1543 aa7.14□□□□□ -1.27
ATP2C1-223ENST00000515854 RAPGEF2Q9Y4G8 1499 aa7.14□□□□□ -1.27
ATP2C1-223ENST00000515854 KIF21AQ7Z4S6 1674 aa7.13□□□□□ -1.27
ATP2C1-223ENST00000515854 CEP162Q5TB80 1403 aa7.13□□□□□ -1.27
ATP2C1-223ENST00000515854 RAD54L2Q9Y4B4 1467 aa7.12□□□□□ -1.27
ATP2C1-223ENST00000515854 CD44P16070 742 aaKnown RBP7.12□□□□□ -1.27
ATP2C1-223ENST00000515854 CLEC11AQ9Y240 323 aa7.12□□□□□ -1.27
ATP2C1-223ENST00000515854 MRC2Q9UBG0 1479 aa7.11□□□□□ -1.27
ATP2C1-223ENST00000515854 ZBTB22O15209 634 aa7.11□□□□□ -1.27
ATP2C1-223ENST00000515854 CHADLQ6NUI6 762 aa7.09□□□□□ -1.27
ATP2C1-223ENST00000515854 WDR97A6NE52 1622 aa7.09□□□□□ -1.28
ATP2C1-223ENST00000515854 CARMIL1Q5VZK9 1371 aa7.08□□□□□ -1.28
ATP2C1-223ENST00000515854 CLIP1P30622 1438 aa7.08□□□□□ -1.28
ATP2C1-223ENST00000515854 WDR62O43379 1518 aa7.07□□□□□ -1.28
ATP2C1-223ENST00000515854 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
ATP2C1-223ENST00000515854 TARBP1Q13395 1621 aaKnown RBP7.07□□□□□ -1.28
ATP2C1-223ENST00000515854 ABCA5Q8WWZ7 1642 aa7.06□□□□□ -1.28
ATP2C1-223ENST00000515854 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
ATP2C1-223ENST00000515854 TDRD9Q8NDG6 1382 aaKnown RBP7.06□□□□□ -1.28
ATP2C1-223ENST00000515854 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 GAPVD1Q14C86 1478 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 CUL7Q14999 1698 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 MAMSTRQ6ZN01 415 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 SPDYE1Q8NFV5 336 aaPredicted RBP7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 PCGF6Q9BYE7 350 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 FOXD4L1Q9NU39 408 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 IFT140Q96RY7 1462 aa7.04□□□□□ -1.28
ATP2C1-223ENST00000515854 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
ATP2C1-223ENST00000515854 VPS8Q8N3P4 1428 aa7.02□□□□□ -1.29
ATP2C1-223ENST00000515854 ARAP1Q96P48 1450 aa7.01□□□□□ -1.29
ATP2C1-223ENST00000515854 ARHGAP35Q9NRY4 1499 aa7□□□□□ -1.29
ATP2C1-223ENST00000515854 AQRO60306 1485 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATP2C1-223ENST00000515854 GRIN2BQ13224 1484 aa6.99□□□□□ -1.29
ATP2C1-223ENST00000515854 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
ATP2C1-223ENST00000515854 ZNF608Q9ULD9 1512 aaPredicted RBP6.99□□□□□ -1.29
ATP2C1-223ENST00000515854 FHAD1B1AJZ9 1412 aa6.99□□□□□ -1.29
ATP2C1-223ENST00000515854 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
ATP2C1-223ENST00000515854 PBRM1Q86U86 1689 aa6.97□□□□□ -1.29
ATP2C1-223ENST00000515854 PPARGC1BQ86YN6 1023 aaKnown RBP6.97□□□□□ -1.29
ATP2C1-223ENST00000515854 ADAMTS12P58397 1594 aa6.96□□□□□ -1.29
ATP2C1-223ENST00000515854 CTTNBP2Q8WZ74 1663 aa6.95□□□□□ -1.3
ATP2C1-223ENST00000515854 EFCAB5A4FU69 1503 aa6.95□□□□□ -1.3
ATP2C1-223ENST00000515854 EIF4G3O43432 1585 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-223ENST00000515854 GALR2O43603 387 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-223ENST00000515854 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
ATP2C1-223ENST00000515854 SNAPC4Q5SXM2 1469 aa6.93□□□□□ -1.3
ATP2C1-223ENST00000515854 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-223ENST00000515854 ZNF579Q8NAF0 562 aaKnown RBP6.92□□□□□ -1.3
ATP2C1-223ENST00000515854 MAP3K1Q13233 1512 aa6.91□□□□□ -1.3
ATP2C1-223ENST00000515854 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
ATP2C1-223ENST00000515854 GRIN2AQ12879 1464 aa6.91□□□□□ -1.3
ATP2C1-223ENST00000515854 HRCP23327 699 aa6.9□□□□□ -1.3
ATP2C1-223ENST00000515854 PELP1Q8IZL8 1130 aaKnown RBP6.9□□□□□ -1.3
ATP2C1-223ENST00000515854 FHOD3Q2V2M9 1422 aa6.9□□□□□ -1.31
ATP2C1-223ENST00000515854 SYNJ2O15056 1496 aa6.9□□□□□ -1.31
ATP2C1-223ENST00000515854 KIAA0586Q9BVV6 1533 aa6.9□□□□□ -1.31
ATP2C1-223ENST00000515854 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-223ENST00000515854 P3H3Q8IVL6 736 aa6.89□□□□□ -1.31
ATP2C1-223ENST00000515854 METRNQ9UJH8 293 aa6.89□□□□□ -1.31
ATP2C1-223ENST00000515854 TTBK1Q5TCY1 1321 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-223ENST00000515854 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
ATP2C1-223ENST00000515854 CASKIN1Q8WXD9 1431 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms