RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-223ENST00000515854 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-223ENST00000515854 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
ATP2C1-223ENST00000515854 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
ATP2C1-223ENST00000515854 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
ATP2C1-223ENST00000515854 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
ATP2C1-223ENST00000515854 FOXD1Q16676 465 aa11.6□□□□□ -0.55
ATP2C1-223ENST00000515854 MSH5O43196 834 aa11.32□□□□□ -0.6
ATP2C1-223ENST00000515854 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-223ENST00000515854 CACNB1Q02641 598 aaPredicted RBP10.47□□□□□ -0.73
ATP2C1-223ENST00000515854 NISCHQ9Y2I1 1504 aa10.09□□□□□ -0.79
ATP2C1-223ENST00000515854 POTEHQ6S545 545 aa10□□□□□ -0.81
ATP2C1-223ENST00000515854 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
ATP2C1-223ENST00000515854 ADRA2BP18089 450 aa9.86□□□□□ -0.83
ATP2C1-223ENST00000515854 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
ATP2C1-223ENST00000515854 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
ATP2C1-223ENST00000515854 MAPK8IP2Q13387 824 aaPredicted RBP9.41□□□□□ -0.9
ATP2C1-223ENST00000515854 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
ATP2C1-223ENST00000515854 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
ATP2C1-223ENST00000515854 PLPPR3Q6T4P5 718 aa9.32□□□□□ -0.92
ATP2C1-223ENST00000515854 SCAF1Q9H7N4 1312 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-223ENST00000515854 SP7Q8TDD2 431 aaPredicted RBP8.82□□□□□ -1
ATP2C1-223ENST00000515854 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
ATP2C1-223ENST00000515854 CCDC180Q9P1Z9 1646 aa8.76□□□□□ -1.01
ATP2C1-223ENST00000515854 HOXD11P31277 338 aaPredicted RBP8.72□□□□□ -1.01
ATP2C1-223ENST00000515854 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
ATP2C1-223ENST00000515854 DSG3P32926 999 aa8.53□□□□□ -1.04
ATP2C1-223ENST00000515854 CHRDL2Q6WN34 429 aa8.48□□□□□ -1.05
ATP2C1-223ENST00000515854 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
ATP2C1-223ENST00000515854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATP2C1-223ENST00000515854 DCAF1Q9Y4B6 1507 aa8.36□□□□□ -1.07
ATP2C1-223ENST00000515854 CAPN15O75808 1086 aa8.36□□□□□ -1.07
ATP2C1-223ENST00000515854 RNF216Q9NWF9 866 aaPredicted RBP8.36□□□□□ -1.07
ATP2C1-223ENST00000515854 DCAF8L2P0C7V8 631 aa8.28□□□□□ -1.08
ATP2C1-223ENST00000515854 SPINK5Q9NQ38 1064 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-223ENST00000515854 LHX8Q68G74 356 aa8.27□□□□□ -1.09
ATP2C1-223ENST00000515854 MYO15BQ96JP2 1530 aa8.25□□□□□ -1.09
ATP2C1-223ENST00000515854 HAX1O00165 279 aa8.25□□□□□ -1.09
ATP2C1-223ENST00000515854 ABCC9O60706 1549 aa8.24□□□□□ -1.09
ATP2C1-223ENST00000515854 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
ATP2C1-223ENST00000515854 RBM42Q9BTD8 480 aaKnown RBP8.2□□□□□ -1.1
ATP2C1-223ENST00000515854 NACADO15069 1562 aa8.16□□□□□ -1.1
ATP2C1-223ENST00000515854 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
ATP2C1-223ENST00000515854 RB1CC1Q8TDY2 1594 aa8.07□□□□□ -1.12
ATP2C1-223ENST00000515854 ABCB7O75027 752 aa8.07□□□□□ -1.12
ATP2C1-223ENST00000515854 SCRIBQ14160 1630 aa8.03□□□□□ -1.12
ATP2C1-223ENST00000515854 PPP4R3CPQ6ZMV5 832 aa8.03□□□□□ -1.12
ATP2C1-223ENST00000515854 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
ATP2C1-223ENST00000515854 U3KPZ7 1027 aaPredicted RBP8.03□□□□□ -1.12
ATP2C1-223ENST00000515854 EVX2Q03828 476 aa8□□□□□ -1.13
ATP2C1-223ENST00000515854 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
ATP2C1-223ENST00000515854 TRHP20396 242 aaPredicted RBP7.94□□□□□ -1.14
ATP2C1-223ENST00000515854 UNC13AQ9UPW8 1703 aa7.86□□□□□ -1.15
ATP2C1-223ENST00000515854 POTEMA6NI47 508 aa7.86□□□□□ -1.15
ATP2C1-223ENST00000515854 RSF1Q96T23 1441 aaPredicted RBP7.85□□□□□ -1.15
ATP2C1-223ENST00000515854 ZNF219Q9P2Y4 722 aaPredicted RBP7.84□□□□□ -1.15
ATP2C1-223ENST00000515854 BICRAQ9NZM4 1560 aa7.84□□□□□ -1.15
ATP2C1-223ENST00000515854 CECR2Q9BXF3 1484 aa7.83□□□□□ -1.16
ATP2C1-223ENST00000515854 POTEGQ6S5H5 508 aa7.79□□□□□ -1.16
ATP2C1-223ENST00000515854 MROH2BQ7Z745 1585 aa7.79□□□□□ -1.16
ATP2C1-223ENST00000515854 PABPN1Q86U42 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATP2C1-223ENST00000515854 BAZ1AQ9NRL2 1556 aaPredicted RBP7.78□□□□□ -1.16
ATP2C1-223ENST00000515854 GABBR2O75899 941 aa7.76□□□□□ -1.17
ATP2C1-223ENST00000515854 FXR2P51116 673 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATP2C1-223ENST00000515854 PCDH10Q9P2E7 1040 aa7.76□□□□□ -1.17
ATP2C1-223ENST00000515854 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
ATP2C1-223ENST00000515854 SMARCA4P51532 1647 aa7.73□□□□□ -1.17
ATP2C1-223ENST00000515854 WIZO95785 1651 aa7.7□□□□□ -1.18
ATP2C1-223ENST00000515854 KCNA4P22459 653 aa7.7□□□□□ -1.18
ATP2C1-223ENST00000515854 APLP2Q06481 763 aa7.7□□□□□ -1.18
ATP2C1-223ENST00000515854 REM2Q8IYK8 340 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-223ENST00000515854 TOP2AP11388 1531 aaKnown RBP7.65□□□□□ -1.18
ATP2C1-223ENST00000515854 PEG3Q9GZU2 1588 aa7.65□□□□□ -1.18
ATP2C1-223ENST00000515854 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
ATP2C1-223ENST00000515854 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
ATP2C1-223ENST00000515854 SMARCA2P51531 1590 aa7.59□□□□□ -1.19
ATP2C1-223ENST00000515854 EIF4G1Q04637 1599 aaKnown RBP7.59□□□□□ -1.2
ATP2C1-223ENST00000515854 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
ATP2C1-223ENST00000515854 C19orf67A6NJJ6 358 aa7.57□□□□□ -1.2
ATP2C1-223ENST00000515854 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
ATP2C1-223ENST00000515854 NCAPD3P42695 1498 aa7.55□□□□□ -1.2
ATP2C1-223ENST00000515854 BAZ1BQ9UIG0 1483 aaKnown RBP7.55□□□□□ -1.2
ATP2C1-223ENST00000515854 HMGXB3Q12766 1538 aa7.52□□□□□ -1.2
ATP2C1-223ENST00000515854 OTUD5Q96G74 571 aa7.52□□□□□ -1.21
ATP2C1-223ENST00000515854 TRIM41Q8WV44 630 aa7.48□□□□□ -1.21
ATP2C1-223ENST00000515854 NCBP3Q53F19 620 aaKnown RBP7.47□□□□□ -1.21
ATP2C1-223ENST00000515854 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
ATP2C1-223ENST00000515854 EHMT2Q96KQ7 1210 aa7.45□□□□□ -1.22
ATP2C1-223ENST00000515854 POLA2Q14181 598 aa7.44□□□□□ -1.22
ATP2C1-223ENST00000515854 PRKAR2AP13861 404 aaKnown RBP7.42□□□□□ -1.22
ATP2C1-223ENST00000515854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.4□□□□□ -1.22
ATP2C1-223ENST00000515854 HNRNPUL2Q1KMD3 747 aaKnown RBP7.4□□□□□ -1.22
ATP2C1-223ENST00000515854 ABCC8Q09428 1581 aa7.4□□□□□ -1.22
ATP2C1-223ENST00000515854 SLC4A1APQ9BWU0 796 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-223ENST00000515854 CFTRP13569 1480 aa7.38□□□□□ -1.23
ATP2C1-223ENST00000515854 WRNQ14191 1432 aaPredicted RBP eCLIP7.37□□□□□ -1.23
ATP2C1-223ENST00000515854 CADPSQ9ULU8 1353 aa7.35□□□□□ -1.23
ATP2C1-223ENST00000515854 LOC105371045A0A1W2PR82 267 aa7.35□□□□□ -1.23
ATP2C1-223ENST00000515854 NPM3O75607 178 aaKnown RBP7.34□□□□□ -1.23
ATP2C1-223ENST00000515854 DCBLD2Q96PD2 775 aa7.34□□□□□ -1.23
ATP2C1-223ENST00000515854 CSRNP3Q8WYN3 585 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms