RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
SNX25-205ENST00000512853 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
SNX25-205ENST00000512853 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
SNX25-205ENST00000512853 PHLDB1Q86UU1 1377 aa16.68■□□□□ 0.26
SNX25-205ENST00000512853 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
SNX25-205ENST00000512853 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
SNX25-205ENST00000512853 FYCO1Q9BQS8 1478 aa16.64■□□□□ 0.25
SNX25-205ENST00000512853 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX25-205ENST00000512853 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SNX25-205ENST00000512853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX25-205ENST00000512853 CC2D2AQ9P2K1 1620 aa16.62■□□□□ 0.25
SNX25-205ENST00000512853 CUL7Q14999 1698 aa16.6■□□□□ 0.25
SNX25-205ENST00000512853 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
SNX25-205ENST00000512853 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
SNX25-205ENST00000512853 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
SNX25-205ENST00000512853 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
SNX25-205ENST00000512853 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
SNX25-205ENST00000512853 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
SNX25-205ENST00000512853 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
SNX25-205ENST00000512853 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
SNX25-205ENST00000512853 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
SNX25-205ENST00000512853 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
SNX25-205ENST00000512853 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
SNX25-205ENST00000512853 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
SNX25-205ENST00000512853 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
SNX25-205ENST00000512853 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
SNX25-205ENST00000512853 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
SNX25-205ENST00000512853 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
SNX25-205ENST00000512853 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
SNX25-205ENST00000512853 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
SNX25-205ENST00000512853 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
SNX25-205ENST00000512853 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
SNX25-205ENST00000512853 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
SNX25-205ENST00000512853 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
SNX25-205ENST00000512853 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
SNX25-205ENST00000512853 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
SNX25-205ENST00000512853 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
SNX25-205ENST00000512853 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
SNX25-205ENST00000512853 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SNX25-205ENST00000512853 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
SNX25-205ENST00000512853 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
SNX25-205ENST00000512853 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
SNX25-205ENST00000512853 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
SNX25-205ENST00000512853 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
SNX25-205ENST00000512853 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
SNX25-205ENST00000512853 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
SNX25-205ENST00000512853 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
SNX25-205ENST00000512853 PTPRKQ15262 1439 aa16.37■□□□□ 0.21
SNX25-205ENST00000512853 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
SNX25-205ENST00000512853 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SNX25-205ENST00000512853 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
SNX25-205ENST00000512853 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
SNX25-205ENST00000512853 NAIPQ13075 1403 aa16.35■□□□□ 0.21
SNX25-205ENST00000512853 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
SNX25-205ENST00000512853 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
SNX25-205ENST00000512853 GCC2Q8IWJ2 1684 aa16.35■□□□□ 0.21
SNX25-205ENST00000512853 ANP32CO43423 234 aa16.34■□□□□ 0.21
SNX25-205ENST00000512853 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
SNX25-205ENST00000512853 HECW1Q76N89 1606 aa16.33■□□□□ 0.2
SNX25-205ENST00000512853 FKBP8Q14318 412 aa16.33■□□□□ 0.2
SNX25-205ENST00000512853 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
SNX25-205ENST00000512853 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
SNX25-205ENST00000512853 NESP48681 1621 aa16.31■□□□□ 0.2
SNX25-205ENST00000512853 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
SNX25-205ENST00000512853 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
SNX25-205ENST00000512853 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
SNX25-205ENST00000512853 NEFLP07196 543 aa16.28■□□□□ 0.2
SNX25-205ENST00000512853 BCANQ96GW7 911 aa16.27■□□□□ 0.19
SNX25-205ENST00000512853 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
SNX25-205ENST00000512853 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
SNX25-205ENST00000512853 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
SNX25-205ENST00000512853 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
SNX25-205ENST00000512853 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
SNX25-205ENST00000512853 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
SNX25-205ENST00000512853 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
SNX25-205ENST00000512853 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
SNX25-205ENST00000512853 KDM6BO15054 1643 aa16.17■□□□□ 0.18
SNX25-205ENST00000512853 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
SNX25-205ENST00000512853 WDR62O43379 1518 aa16.15■□□□□ 0.18
SNX25-205ENST00000512853 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
SNX25-205ENST00000512853 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
SNX25-205ENST00000512853 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.17
SNX25-205ENST00000512853 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
SNX25-205ENST00000512853 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
SNX25-205ENST00000512853 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
SNX25-205ENST00000512853 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
SNX25-205ENST00000512853 POLR1AO95602 1720 aaPredicted RBP16.12■□□□□ 0.17
SNX25-205ENST00000512853 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
SNX25-205ENST00000512853 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
SNX25-205ENST00000512853 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
SNX25-205ENST00000512853 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
SNX25-205ENST00000512853 DNMT1P26358 1616 aaKnown RBP16.07■□□□□ 0.16
SNX25-205ENST00000512853 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNX25-205ENST00000512853 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
SNX25-205ENST00000512853 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
SNX25-205ENST00000512853 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX25-205ENST00000512853 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
SNX25-205ENST00000512853 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
SNX25-205ENST00000512853 CCDC7Q96M83 1385 aa16.04■□□□□ 0.16
SNX25-205ENST00000512853 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms