RNA–Protein interactions for RNA: ENST00000503829.5

LDB2-205, Transcript of LIM domain binding 2, humanhuman

TSL 4

Gene LDB2, Length 583 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-205ENST00000503829 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
LDB2-205ENST00000503829 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
LDB2-205ENST00000503829 TOP2BQ02880 1626 aa12.87□□□□□ -0.35
LDB2-205ENST00000503829 CUX1P39880 1505 aa12.85□□□□□ -0.35
LDB2-205ENST00000503829 NESP48681 1621 aa12.84□□□□□ -0.35
LDB2-205ENST00000503829 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
LDB2-205ENST00000503829 FANCD2Q9BXW9 1451 aa12.79□□□□□ -0.36
LDB2-205ENST00000503829 SOGA1O94964 1423 aa12.79□□□□□ -0.36
LDB2-205ENST00000503829 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
LDB2-205ENST00000503829 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
LDB2-205ENST00000503829 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
LDB2-205ENST00000503829 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
LDB2-205ENST00000503829 EEA1Q15075 1411 aa12.74□□□□□ -0.37
LDB2-205ENST00000503829 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
LDB2-205ENST00000503829 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
LDB2-205ENST00000503829 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
LDB2-205ENST00000503829 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
LDB2-205ENST00000503829 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
LDB2-205ENST00000503829 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
LDB2-205ENST00000503829 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
LDB2-205ENST00000503829 KIF21AQ7Z4S6 1674 aa12.68□□□□□ -0.38
LDB2-205ENST00000503829 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
LDB2-205ENST00000503829 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
LDB2-205ENST00000503829 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
LDB2-205ENST00000503829 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
LDB2-205ENST00000503829 KIF21BO75037 1637 aa12.62□□□□□ -0.39
LDB2-205ENST00000503829 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
LDB2-205ENST00000503829 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
LDB2-205ENST00000503829 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
LDB2-205ENST00000503829 KIF27Q86VH2 1401 aa12.58□□□□□ -0.4
LDB2-205ENST00000503829 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
LDB2-205ENST00000503829 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
LDB2-205ENST00000503829 RAD54L2Q9Y4B4 1467 aa12.57□□□□□ -0.4
LDB2-205ENST00000503829 CUX2O14529 1486 aa12.56□□□□□ -0.4
LDB2-205ENST00000503829 WDR62O43379 1518 aa12.56□□□□□ -0.4
LDB2-205ENST00000503829 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
LDB2-205ENST00000503829 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
LDB2-205ENST00000503829 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
LDB2-205ENST00000503829 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
LDB2-205ENST00000503829 THOC2Q8NI27 1593 aaKnown RBP12.53□□□□□ -0.4
LDB2-205ENST00000503829 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
LDB2-205ENST00000503829 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
LDB2-205ENST00000503829 IGF1RP08069 1367 aa12.52□□□□□ -0.41
LDB2-205ENST00000503829 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
LDB2-205ENST00000503829 PROM2Q8N271 834 aa12.48□□□□□ -0.41
LDB2-205ENST00000503829 CEP162Q5TB80 1403 aa12.46□□□□□ -0.41
LDB2-205ENST00000503829 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
LDB2-205ENST00000503829 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
LDB2-205ENST00000503829 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
LDB2-205ENST00000503829 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
LDB2-205ENST00000503829 HAX1O00165 279 aa12.42□□□□□ -0.42
LDB2-205ENST00000503829 CUL7Q14999 1698 aa12.41□□□□□ -0.42
LDB2-205ENST00000503829 CARMIL1Q5VZK9 1371 aa12.41□□□□□ -0.42
LDB2-205ENST00000503829 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
LDB2-205ENST00000503829 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
LDB2-205ENST00000503829 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
LDB2-205ENST00000503829 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
LDB2-205ENST00000503829 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
LDB2-205ENST00000503829 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
LDB2-205ENST00000503829 EVX2Q03828 476 aa12.35□□□□□ -0.43
LDB2-205ENST00000503829 CLIP1P30622 1438 aa12.35□□□□□ -0.43
LDB2-205ENST00000503829 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
LDB2-205ENST00000503829 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
LDB2-205ENST00000503829 ADAMTS12P58397 1594 aa12.34□□□□□ -0.43
LDB2-205ENST00000503829 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
LDB2-205ENST00000503829 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
LDB2-205ENST00000503829 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
LDB2-205ENST00000503829 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
LDB2-205ENST00000503829 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
LDB2-205ENST00000503829 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
LDB2-205ENST00000503829 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
LDB2-205ENST00000503829 FKBP8Q14318 412 aa12.27□□□□□ -0.45
LDB2-205ENST00000503829 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
LDB2-205ENST00000503829 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
LDB2-205ENST00000503829 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
LDB2-205ENST00000503829 MAGI1Q96QZ7 1491 aaPredicted RBP12.23□□□□□ -0.45
LDB2-205ENST00000503829 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
LDB2-205ENST00000503829 EFCAB5A4FU69 1503 aa12.2□□□□□ -0.46
LDB2-205ENST00000503829 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
LDB2-205ENST00000503829 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
LDB2-205ENST00000503829 SYNJ2O15056 1496 aa12.18□□□□□ -0.46
LDB2-205ENST00000503829 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
LDB2-205ENST00000503829 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
LDB2-205ENST00000503829 NUP160Q12769 1436 aa12.14□□□□□ -0.47
LDB2-205ENST00000503829 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
LDB2-205ENST00000503829 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
LDB2-205ENST00000503829 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
LDB2-205ENST00000503829 KIAA0586Q9BVV6 1533 aa12.12□□□□□ -0.47
LDB2-205ENST00000503829 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
LDB2-205ENST00000503829 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
LDB2-205ENST00000503829 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
LDB2-205ENST00000503829 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
LDB2-205ENST00000503829 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
LDB2-205ENST00000503829 DISP1Q96F81 1524 aa12.07□□□□□ -0.48
LDB2-205ENST00000503829 GABBR2O75899 941 aa12.07□□□□□ -0.48
LDB2-205ENST00000503829 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
LDB2-205ENST00000503829 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
LDB2-205ENST00000503829 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
LDB2-205ENST00000503829 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
LDB2-205ENST00000503829 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms