RNA–Protein interactions for RNA: ENST00000503829.5

LDB2-205, Transcript of LIM domain binding 2, humanhuman

TSL 4

Gene LDB2, Length 583 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-205ENST00000503829 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
LDB2-205ENST00000503829 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
LDB2-205ENST00000503829 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
LDB2-205ENST00000503829 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
LDB2-205ENST00000503829 FOXD1Q16676 465 aa18.8■□□□□ 0.6
LDB2-205ENST00000503829 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
LDB2-205ENST00000503829 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
LDB2-205ENST00000503829 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
LDB2-205ENST00000503829 ADRA2BP18089 450 aa17.7■□□□□ 0.42
LDB2-205ENST00000503829 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
LDB2-205ENST00000503829 MSH5O43196 834 aa17.48■□□□□ 0.39
LDB2-205ENST00000503829 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
LDB2-205ENST00000503829 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
LDB2-205ENST00000503829 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
LDB2-205ENST00000503829 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
LDB2-205ENST00000503829 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
LDB2-205ENST00000503829 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
LDB2-205ENST00000503829 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
LDB2-205ENST00000503829 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
LDB2-205ENST00000503829 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
LDB2-205ENST00000503829 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
LDB2-205ENST00000503829 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
LDB2-205ENST00000503829 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
LDB2-205ENST00000503829 KCNA4P22459 653 aa15.22■□□□□ 0.03
LDB2-205ENST00000503829 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
LDB2-205ENST00000503829 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
LDB2-205ENST00000503829 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
LDB2-205ENST00000503829 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
LDB2-205ENST00000503829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDB2-205ENST00000503829 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
LDB2-205ENST00000503829 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
LDB2-205ENST00000503829 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
LDB2-205ENST00000503829 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
LDB2-205ENST00000503829 ABCC9O60706 1549 aa14.57□□□□□ -0.08
LDB2-205ENST00000503829 U3KPZ7 1027 aaPredicted RBP14.56□□□□□ -0.08
LDB2-205ENST00000503829 NACADO15069 1562 aa14.42□□□□□ -0.1
LDB2-205ENST00000503829 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
LDB2-205ENST00000503829 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
LDB2-205ENST00000503829 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
LDB2-205ENST00000503829 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
LDB2-205ENST00000503829 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
LDB2-205ENST00000503829 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
LDB2-205ENST00000503829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
LDB2-205ENST00000503829 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
LDB2-205ENST00000503829 CAPN15O75808 1086 aa14.17□□□□□ -0.14
LDB2-205ENST00000503829 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
LDB2-205ENST00000503829 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
LDB2-205ENST00000503829 APLP2Q06481 763 aa14.12□□□□□ -0.15
LDB2-205ENST00000503829 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
LDB2-205ENST00000503829 DSG3P32926 999 aa14.09□□□□□ -0.15
LDB2-205ENST00000503829 ZBTB22O15209 634 aa14.03□□□□□ -0.16
LDB2-205ENST00000503829 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
LDB2-205ENST00000503829 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
LDB2-205ENST00000503829 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
LDB2-205ENST00000503829 BICRAQ9NZM4 1560 aa13.94□□□□□ -0.18
LDB2-205ENST00000503829 ABCB7O75027 752 aa13.87□□□□□ -0.19
LDB2-205ENST00000503829 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
LDB2-205ENST00000503829 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
LDB2-205ENST00000503829 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
LDB2-205ENST00000503829 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
LDB2-205ENST00000503829 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
LDB2-205ENST00000503829 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
LDB2-205ENST00000503829 POLA2Q14181 598 aa13.7□□□□□ -0.22
LDB2-205ENST00000503829 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
LDB2-205ENST00000503829 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
LDB2-205ENST00000503829 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
LDB2-205ENST00000503829 WIZO95785 1651 aa13.59□□□□□ -0.23
LDB2-205ENST00000503829 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
LDB2-205ENST00000503829 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
LDB2-205ENST00000503829 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
LDB2-205ENST00000503829 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
LDB2-205ENST00000503829 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
LDB2-205ENST00000503829 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
LDB2-205ENST00000503829 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
LDB2-205ENST00000503829 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
LDB2-205ENST00000503829 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
LDB2-205ENST00000503829 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
LDB2-205ENST00000503829 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
LDB2-205ENST00000503829 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
LDB2-205ENST00000503829 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
LDB2-205ENST00000503829 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
LDB2-205ENST00000503829 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
LDB2-205ENST00000503829 FBLN2P98095 1184 aa13.2□□□□□ -0.3
LDB2-205ENST00000503829 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
LDB2-205ENST00000503829 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
LDB2-205ENST00000503829 POTEHQ6S545 545 aa13.09□□□□□ -0.31
LDB2-205ENST00000503829 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
LDB2-205ENST00000503829 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
LDB2-205ENST00000503829 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
LDB2-205ENST00000503829 CFTRP13569 1480 aa13.04□□□□□ -0.32
LDB2-205ENST00000503829 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
LDB2-205ENST00000503829 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
LDB2-205ENST00000503829 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
LDB2-205ENST00000503829 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
LDB2-205ENST00000503829 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
LDB2-205ENST00000503829 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
LDB2-205ENST00000503829 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
LDB2-205ENST00000503829 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
LDB2-205ENST00000503829 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
LDB2-205ENST00000503829 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms