RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
RAB3GAP1-205ENST00000489858 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
RAB3GAP1-205ENST00000489858 EVX2Q03828 476 aa15.27■□□□□ 0.04
RAB3GAP1-205ENST00000489858 HRCP23327 699 aa15.25■□□□□ 0.03
RAB3GAP1-205ENST00000489858 EEA1Q15075 1411 aa15.21■□□□□ 0.03
RAB3GAP1-205ENST00000489858 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
RAB3GAP1-205ENST00000489858 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
RAB3GAP1-205ENST00000489858 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
RAB3GAP1-205ENST00000489858 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
RAB3GAP1-205ENST00000489858 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
RAB3GAP1-205ENST00000489858 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
RAB3GAP1-205ENST00000489858 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
RAB3GAP1-205ENST00000489858 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
RAB3GAP1-205ENST00000489858 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
RAB3GAP1-205ENST00000489858 SOGA1O94964 1423 aa15.08■□□□□ 0
RAB3GAP1-205ENST00000489858 GOLGA3Q08378 1498 aa15.04■□□□□ -0
RAB3GAP1-205ENST00000489858 KIF21BO75037 1637 aa15.03■□□□□ -0
RAB3GAP1-205ENST00000489858 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
RAB3GAP1-205ENST00000489858 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
RAB3GAP1-205ENST00000489858 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
RAB3GAP1-205ENST00000489858 CEP162Q5TB80 1403 aa15□□□□□ -0.01
RAB3GAP1-205ENST00000489858 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
RAB3GAP1-205ENST00000489858 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
RAB3GAP1-205ENST00000489858 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
RAB3GAP1-205ENST00000489858 GABBR2O75899 941 aa14.95□□□□□ -0.02
RAB3GAP1-205ENST00000489858 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
RAB3GAP1-205ENST00000489858 CFTRP13569 1480 aa14.9□□□□□ -0.02
RAB3GAP1-205ENST00000489858 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
RAB3GAP1-205ENST00000489858 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
RAB3GAP1-205ENST00000489858 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
RAB3GAP1-205ENST00000489858 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
RAB3GAP1-205ENST00000489858 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
RAB3GAP1-205ENST00000489858 CUX1P39880 1505 aa14.86□□□□□ -0.03
RAB3GAP1-205ENST00000489858 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
RAB3GAP1-205ENST00000489858 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
RAB3GAP1-205ENST00000489858 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
RAB3GAP1-205ENST00000489858 CLIP1P30622 1438 aa14.78□□□□□ -0.04
RAB3GAP1-205ENST00000489858 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
RAB3GAP1-205ENST00000489858 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
RAB3GAP1-205ENST00000489858 CLCN6P51797 869 aa14.77□□□□□ -0.05
RAB3GAP1-205ENST00000489858 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
RAB3GAP1-205ENST00000489858 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
RAB3GAP1-205ENST00000489858 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
RAB3GAP1-205ENST00000489858 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
RAB3GAP1-205ENST00000489858 ZNF579Q8NAF0 562 aaKnown RBP14.66□□□□□ -0.06
RAB3GAP1-205ENST00000489858 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
RAB3GAP1-205ENST00000489858 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
RAB3GAP1-205ENST00000489858 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
RAB3GAP1-205ENST00000489858 LHX8Q68G74 356 aa14.62□□□□□ -0.07
RAB3GAP1-205ENST00000489858 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
RAB3GAP1-205ENST00000489858 CUX2O14529 1486 aa14.62□□□□□ -0.07
RAB3GAP1-205ENST00000489858 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
RAB3GAP1-205ENST00000489858 ARAP1Q96P48 1450 aa14.58□□□□□ -0.08
RAB3GAP1-205ENST00000489858 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
RAB3GAP1-205ENST00000489858 TTBK1Q5TCY1 1321 aaPredicted RBP14.58□□□□□ -0.08
RAB3GAP1-205ENST00000489858 PROM2Q8N271 834 aa14.56□□□□□ -0.08
RAB3GAP1-205ENST00000489858 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
RAB3GAP1-205ENST00000489858 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
RAB3GAP1-205ENST00000489858 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
RAB3GAP1-205ENST00000489858 DCBLD2Q96PD2 775 aa14.53□□□□□ -0.08
RAB3GAP1-205ENST00000489858 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
RAB3GAP1-205ENST00000489858 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
RAB3GAP1-205ENST00000489858 IGF1RP08069 1367 aa14.49□□□□□ -0.09
RAB3GAP1-205ENST00000489858 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
RAB3GAP1-205ENST00000489858 CUL7Q14999 1698 aa14.49□□□□□ -0.09
RAB3GAP1-205ENST00000489858 NESP48681 1621 aa14.48□□□□□ -0.09
RAB3GAP1-205ENST00000489858 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
RAB3GAP1-205ENST00000489858 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
RAB3GAP1-205ENST00000489858 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
RAB3GAP1-205ENST00000489858 RANGAP1P46060 587 aaPredicted RBP14.47□□□□□ -0.09
RAB3GAP1-205ENST00000489858 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
RAB3GAP1-205ENST00000489858 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
RAB3GAP1-205ENST00000489858 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
RAB3GAP1-205ENST00000489858 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
RAB3GAP1-205ENST00000489858 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
RAB3GAP1-205ENST00000489858 CTTNBP2Q8WZ74 1663 aa14.4□□□□□ -0.1
RAB3GAP1-205ENST00000489858 PHF12Q96QT6 1004 aa14.4□□□□□ -0.1
RAB3GAP1-205ENST00000489858 MAP3K1Q13233 1512 aa14.4□□□□□ -0.1
RAB3GAP1-205ENST00000489858 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
RAB3GAP1-205ENST00000489858 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
RAB3GAP1-205ENST00000489858 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
RAB3GAP1-205ENST00000489858 CFAP43Q8NDM7 1665 aa14.37□□□□□ -0.11
RAB3GAP1-205ENST00000489858 TIAM1Q13009 1591 aa14.37□□□□□ -0.11
RAB3GAP1-205ENST00000489858 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
RAB3GAP1-205ENST00000489858 RRBP1Q9P2E9 1410 aaKnown RBP14.34□□□□□ -0.11
RAB3GAP1-205ENST00000489858 PCF11O94913 1555 aaKnown RBP14.32□□□□□ -0.12
RAB3GAP1-205ENST00000489858 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
RAB3GAP1-205ENST00000489858 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
RAB3GAP1-205ENST00000489858 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
RAB3GAP1-205ENST00000489858 FYCO1Q9BQS8 1478 aa14.28□□□□□ -0.12
RAB3GAP1-205ENST00000489858 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
RAB3GAP1-205ENST00000489858 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
RAB3GAP1-205ENST00000489858 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
RAB3GAP1-205ENST00000489858 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
RAB3GAP1-205ENST00000489858 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
RAB3GAP1-205ENST00000489858 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
RAB3GAP1-205ENST00000489858 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
RAB3GAP1-205ENST00000489858 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
RAB3GAP1-205ENST00000489858 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
RAB3GAP1-205ENST00000489858 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms