RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
RAB3GAP1-205ENST00000489858 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
RAB3GAP1-205ENST00000489858 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
RAB3GAP1-205ENST00000489858 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
RAB3GAP1-205ENST00000489858 FOXD1Q16676 465 aa23.11■■□□□ 1.29
RAB3GAP1-205ENST00000489858 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
RAB3GAP1-205ENST00000489858 MSH5O43196 834 aa21.7■■□□□ 1.06
RAB3GAP1-205ENST00000489858 PIAS4Q8N2W9 510 aaPredicted RBP21.56■■□□□ 1.04
RAB3GAP1-205ENST00000489858 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
RAB3GAP1-205ENST00000489858 ADRA2BP18089 450 aa21.44■■□□□ 1.02
RAB3GAP1-205ENST00000489858 POTEDQ86YR6 584 aa21.28■■□□□ 1
RAB3GAP1-205ENST00000489858 NISCHQ9Y2I1 1504 aa20.56■□□□□ 0.88
RAB3GAP1-205ENST00000489858 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
RAB3GAP1-205ENST00000489858 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
RAB3GAP1-205ENST00000489858 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
RAB3GAP1-205ENST00000489858 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
RAB3GAP1-205ENST00000489858 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
RAB3GAP1-205ENST00000489858 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
RAB3GAP1-205ENST00000489858 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
RAB3GAP1-205ENST00000489858 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
RAB3GAP1-205ENST00000489858 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
RAB3GAP1-205ENST00000489858 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
RAB3GAP1-205ENST00000489858 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
RAB3GAP1-205ENST00000489858 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
RAB3GAP1-205ENST00000489858 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
RAB3GAP1-205ENST00000489858 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
RAB3GAP1-205ENST00000489858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
RAB3GAP1-205ENST00000489858 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
RAB3GAP1-205ENST00000489858 KCNA4P22459 653 aa17.74■□□□□ 0.43
RAB3GAP1-205ENST00000489858 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
RAB3GAP1-205ENST00000489858 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
RAB3GAP1-205ENST00000489858 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
RAB3GAP1-205ENST00000489858 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
RAB3GAP1-205ENST00000489858 CAPN15O75808 1086 aa17.33■□□□□ 0.36
RAB3GAP1-205ENST00000489858 DSG3P32926 999 aa17.28■□□□□ 0.36
RAB3GAP1-205ENST00000489858 APLP2Q06481 763 aa17.17■□□□□ 0.34
RAB3GAP1-205ENST00000489858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
RAB3GAP1-205ENST00000489858 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
RAB3GAP1-205ENST00000489858 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
RAB3GAP1-205ENST00000489858 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
RAB3GAP1-205ENST00000489858 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
RAB3GAP1-205ENST00000489858 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
RAB3GAP1-205ENST00000489858 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
RAB3GAP1-205ENST00000489858 ABCB7O75027 752 aa16.9■□□□□ 0.3
RAB3GAP1-205ENST00000489858 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
RAB3GAP1-205ENST00000489858 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
RAB3GAP1-205ENST00000489858 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
RAB3GAP1-205ENST00000489858 POTEHQ6S545 545 aa16.66■□□□□ 0.26
RAB3GAP1-205ENST00000489858 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
RAB3GAP1-205ENST00000489858 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
RAB3GAP1-205ENST00000489858 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
RAB3GAP1-205ENST00000489858 POLA2Q14181 598 aa16.57■□□□□ 0.24
RAB3GAP1-205ENST00000489858 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
RAB3GAP1-205ENST00000489858 NACADO15069 1562 aa16.43■□□□□ 0.22
RAB3GAP1-205ENST00000489858 ABCC9O60706 1549 aa16.42■□□□□ 0.22
RAB3GAP1-205ENST00000489858 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
RAB3GAP1-205ENST00000489858 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
RAB3GAP1-205ENST00000489858 ZBTB22O15209 634 aa16.3■□□□□ 0.2
RAB3GAP1-205ENST00000489858 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
RAB3GAP1-205ENST00000489858 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
RAB3GAP1-205ENST00000489858 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
RAB3GAP1-205ENST00000489858 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
RAB3GAP1-205ENST00000489858 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
RAB3GAP1-205ENST00000489858 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
RAB3GAP1-205ENST00000489858 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
RAB3GAP1-205ENST00000489858 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
RAB3GAP1-205ENST00000489858 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
RAB3GAP1-205ENST00000489858 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
RAB3GAP1-205ENST00000489858 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
RAB3GAP1-205ENST00000489858 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
RAB3GAP1-205ENST00000489858 FBLN2P98095 1184 aa15.82■□□□□ 0.12
RAB3GAP1-205ENST00000489858 WIZO95785 1651 aa15.81■□□□□ 0.12
RAB3GAP1-205ENST00000489858 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
RAB3GAP1-205ENST00000489858 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
RAB3GAP1-205ENST00000489858 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
RAB3GAP1-205ENST00000489858 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
RAB3GAP1-205ENST00000489858 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
RAB3GAP1-205ENST00000489858 PIP4P2Q8N4L2 257 aa15.75■□□□□ 0.11
RAB3GAP1-205ENST00000489858 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
RAB3GAP1-205ENST00000489858 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
RAB3GAP1-205ENST00000489858 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
RAB3GAP1-205ENST00000489858 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
RAB3GAP1-205ENST00000489858 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
RAB3GAP1-205ENST00000489858 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
RAB3GAP1-205ENST00000489858 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
RAB3GAP1-205ENST00000489858 SSUH2Q9Y2M2 353 aa15.54■□□□□ 0.08
RAB3GAP1-205ENST00000489858 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
RAB3GAP1-205ENST00000489858 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
RAB3GAP1-205ENST00000489858 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
RAB3GAP1-205ENST00000489858 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
RAB3GAP1-205ENST00000489858 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
RAB3GAP1-205ENST00000489858 HAX1O00165 279 aa15.48■□□□□ 0.07
RAB3GAP1-205ENST00000489858 LOC105371045A0A1W2PR82 267 aa15.47■□□□□ 0.07
RAB3GAP1-205ENST00000489858 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
RAB3GAP1-205ENST00000489858 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB3GAP1-205ENST00000489858 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
RAB3GAP1-205ENST00000489858 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
RAB3GAP1-205ENST00000489858 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
RAB3GAP1-205ENST00000489858 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
RAB3GAP1-205ENST00000489858 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms