RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
PRDM1-207ENST00000489365 TARBP1Q13395 1621 aaKnown RBP8.92□□□□□ -0.98
PRDM1-207ENST00000489365 CHMP7Q8WUX9 453 aaPredicted RBP8.91□□□□□ -0.98
PRDM1-207ENST00000489365 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
PRDM1-207ENST00000489365 TDRD9Q8NDG6 1382 aaKnown RBP8.9□□□□□ -0.98
PRDM1-207ENST00000489365 RIMBP3CA6NJZ7 1639 aa8.9□□□□□ -0.99
PRDM1-207ENST00000489365 RIMBP3BA6NNM3 1639 aa8.9□□□□□ -0.99
PRDM1-207ENST00000489365 RIMBP3Q9UFD9 1639 aa8.9□□□□□ -0.99
PRDM1-207ENST00000489365 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
PRDM1-207ENST00000489365 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
PRDM1-207ENST00000489365 ARHGEF11O15085 1522 aa8.89□□□□□ -0.99
PRDM1-207ENST00000489365 GRIN2BQ13224 1484 aa8.88□□□□□ -0.99
PRDM1-207ENST00000489365 MAGI1Q96QZ7 1491 aaPredicted RBP8.88□□□□□ -0.99
PRDM1-207ENST00000489365 CHD1O14646 1710 aa8.88□□□□□ -0.99
PRDM1-207ENST00000489365 CUX1P39880 1505 aa8.87□□□□□ -0.99
PRDM1-207ENST00000489365 CYB5RLQ6IPT4 315 aa8.87□□□□□ -0.99
PRDM1-207ENST00000489365 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
PRDM1-207ENST00000489365 SYNJ1O43426 1573 aa8.86□□□□□ -0.99
PRDM1-207ENST00000489365 WRNQ14191 1432 aaPredicted RBP eCLIP8.85□□□□□ -0.99
PRDM1-207ENST00000489365 SYNJ2O15056 1496 aa8.84□□□□□ -0.99
PRDM1-207ENST00000489365 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
PRDM1-207ENST00000489365 CAPN15O75808 1086 aa8.83□□□□□ -1
PRDM1-207ENST00000489365 TRHP20396 242 aaPredicted RBP8.82□□□□□ -1
PRDM1-207ENST00000489365 ABCA10Q8WWZ4 1543 aa8.81□□□□□ -1
PRDM1-207ENST00000489365 DSG3P32926 999 aa8.81□□□□□ -1
PRDM1-207ENST00000489365 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
PRDM1-207ENST00000489365 PBRM1Q86U86 1689 aa8.8□□□□□ -1
PRDM1-207ENST00000489365 ARAP1Q96P48 1450 aa8.78□□□□□ -1
PRDM1-207ENST00000489365 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
PRDM1-207ENST00000489365 CLASP1Q7Z460 1538 aa8.77□□□□□ -1.01
PRDM1-207ENST00000489365 TOP2BQ02880 1626 aa8.76□□□□□ -1.01
PRDM1-207ENST00000489365 POTEHQ6S545 545 aa8.76□□□□□ -1.01
PRDM1-207ENST00000489365 BIVM-ERCC5R4GMW8 1640 aa8.75□□□□□ -1.01
PRDM1-207ENST00000489365 FHAD1B1AJZ9 1412 aa8.74□□□□□ -1.01
PRDM1-207ENST00000489365 GRIN2AQ12879 1464 aa8.74□□□□□ -1.01
PRDM1-207ENST00000489365 ERICH3Q5RHP9 1530 aa8.73□□□□□ -1.01
PRDM1-207ENST00000489365 ADAMTS12P58397 1594 aa8.72□□□□□ -1.01
PRDM1-207ENST00000489365 POLA2Q14181 598 aa8.69□□□□□ -1.02
PRDM1-207ENST00000489365 NUP160Q12769 1436 aa8.69□□□□□ -1.02
PRDM1-207ENST00000489365 ABCB7O75027 752 aa8.67□□□□□ -1.02
PRDM1-207ENST00000489365 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
PRDM1-207ENST00000489365 CEP170Q5SW79 1584 aa8.66□□□□□ -1.02
PRDM1-207ENST00000489365 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRDM1-207ENST00000489365 JPH4Q96JJ6 628 aa8.64□□□□□ -1.03
PRDM1-207ENST00000489365 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
PRDM1-207ENST00000489365 CUL7Q14999 1698 aa8.62□□□□□ -1.03
PRDM1-207ENST00000489365 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
PRDM1-207ENST00000489365 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
PRDM1-207ENST00000489365 ERCC6L2Q5T890 1561 aa8.59□□□□□ -1.03
PRDM1-207ENST00000489365 KIAA0586Q9BVV6 1533 aa8.59□□□□□ -1.03
PRDM1-207ENST00000489365 CARMIL2Q6F5E8 1435 aa8.58□□□□□ -1.04
PRDM1-207ENST00000489365 IGF1RP08069 1367 aa8.58□□□□□ -1.04
PRDM1-207ENST00000489365 CARMIL1Q5VZK9 1371 aa8.57□□□□□ -1.04
PRDM1-207ENST00000489365 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
PRDM1-207ENST00000489365 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
PRDM1-207ENST00000489365 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
PRDM1-207ENST00000489365 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
PRDM1-207ENST00000489365 FAM69CQ0P6D2 419 aa8.53□□□□□ -1.04
PRDM1-207ENST00000489365 PTPRGP23470 1445 aa8.53□□□□□ -1.04
PRDM1-207ENST00000489365 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
PRDM1-207ENST00000489365 MAPKBP1O60336 1514 aa8.51□□□□□ -1.05
PRDM1-207ENST00000489365 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
PRDM1-207ENST00000489365 RAPGEF2Q9Y4G8 1499 aa8.51□□□□□ -1.05
PRDM1-207ENST00000489365 ABCC10Q5T3U5 1492 aa8.5□□□□□ -1.05
PRDM1-207ENST00000489365 RBM42Q9BTD8 480 aaKnown RBP8.49□□□□□ -1.05
PRDM1-207ENST00000489365 ADCY10Q96PN6 1610 aa8.48□□□□□ -1.05
PRDM1-207ENST00000489365 KIF13AQ9H1H9 1805 aa8.46□□□□□ -1.06
PRDM1-207ENST00000489365 UACAQ9BZF9 1416 aa8.46□□□□□ -1.06
PRDM1-207ENST00000489365 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
PRDM1-207ENST00000489365 PLB1Q6P1J6 1458 aa8.45□□□□□ -1.06
PRDM1-207ENST00000489365 ABCC2Q92887 1545 aa8.45□□□□□ -1.06
PRDM1-207ENST00000489365 DIP2BQ9P265 1576 aa8.45□□□□□ -1.06
PRDM1-207ENST00000489365 FKBP8Q14318 412 aa8.44□□□□□ -1.06
PRDM1-207ENST00000489365 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
PRDM1-207ENST00000489365 UHRF1BP1LA0JNW5 1464 aa8.43□□□□□ -1.06
PRDM1-207ENST00000489365 KDM6BO15054 1643 aa8.43□□□□□ -1.06
PRDM1-207ENST00000489365 ASXL2Q76L83 1435 aa8.42□□□□□ -1.06
PRDM1-207ENST00000489365 CTTNBP2Q8WZ74 1663 aa8.41□□□□□ -1.06
PRDM1-207ENST00000489365 TSPOAP1O95153 1857 aa8.4□□□□□ -1.06
PRDM1-207ENST00000489365 KIAA0556O60303 1618 aa8.4□□□□□ -1.06
PRDM1-207ENST00000489365 DISP1Q96F81 1524 aa8.4□□□□□ -1.06
PRDM1-207ENST00000489365 TEX14Q8IWB6 1497 aa8.4□□□□□ -1.06
PRDM1-207ENST00000489365 EEA1Q15075 1411 aa8.38□□□□□ -1.07
PRDM1-207ENST00000489365 SPDYE4A6NLX3 237 aa8.38□□□□□ -1.07
PRDM1-207ENST00000489365 GLI2P10070 1586 aa8.38□□□□□ -1.07
PRDM1-207ENST00000489365 KDM5BQ9UGL1 1544 aa8.38□□□□□ -1.07
PRDM1-207ENST00000489365 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
PRDM1-207ENST00000489365 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
PRDM1-207ENST00000489365 ZCCHC11Q5TAX3 1644 aaKnown RBP8.36□□□□□ -1.07
PRDM1-207ENST00000489365 EPRSP07814 1512 aaKnown RBP8.35□□□□□ -1.07
PRDM1-207ENST00000489365 KCNH8Q96L42 1107 aa8.34□□□□□ -1.07
PRDM1-207ENST00000489365 SPDYE2BA6NHP3 402 aa8.33□□□□□ -1.08
PRDM1-207ENST00000489365 SPDYE6P0CI01 402 aa8.33□□□□□ -1.08
PRDM1-207ENST00000489365 SPDYE2Q495Y8 402 aa8.33□□□□□ -1.08
PRDM1-207ENST00000489365 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
PRDM1-207ENST00000489365 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
PRDM1-207ENST00000489365 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
PRDM1-207ENST00000489365 MAP3K4Q9Y6R4 1608 aa8.32□□□□□ -1.08
PRDM1-207ENST00000489365 ABCA8O94911 1581 aa8.31□□□□□ -1.08
PRDM1-207ENST00000489365 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms