RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
PRDM1-207ENST00000489365 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
PRDM1-207ENST00000489365 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
PRDM1-207ENST00000489365 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
PRDM1-207ENST00000489365 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
PRDM1-207ENST00000489365 FOXD1Q16676 465 aa11.79□□□□□ -0.52
PRDM1-207ENST00000489365 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
PRDM1-207ENST00000489365 POTEDQ86YR6 584 aa11.41□□□□□ -0.58
PRDM1-207ENST00000489365 MSH5O43196 834 aa11.19□□□□□ -0.62
PRDM1-207ENST00000489365 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
PRDM1-207ENST00000489365 ADRA2BP18089 450 aa11.16□□□□□ -0.62
PRDM1-207ENST00000489365 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
PRDM1-207ENST00000489365 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-207ENST00000489365 ABCC9O60706 1549 aa10.99□□□□□ -0.65
PRDM1-207ENST00000489365 RB1CC1Q8TDY2 1594 aa10.52□□□□□ -0.72
PRDM1-207ENST00000489365 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
PRDM1-207ENST00000489365 NACADO15069 1562 aa10.45□□□□□ -0.74
PRDM1-207ENST00000489365 PPP4R3CPQ6ZMV5 832 aa10.33□□□□□ -0.76
PRDM1-207ENST00000489365 MYO15BQ96JP2 1530 aa10.29□□□□□ -0.76
PRDM1-207ENST00000489365 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
PRDM1-207ENST00000489365 SCAF1Q9H7N4 1312 aaKnown RBP10.19□□□□□ -0.78
PRDM1-207ENST00000489365 ZCCHC6Q5VYS8 1495 aaKnown RBP10.18□□□□□ -0.78
PRDM1-207ENST00000489365 KCNA4P22459 653 aa10.17□□□□□ -0.78
PRDM1-207ENST00000489365 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
PRDM1-207ENST00000489365 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
PRDM1-207ENST00000489365 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
PRDM1-207ENST00000489365 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
PRDM1-207ENST00000489365 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
PRDM1-207ENST00000489365 BICRAQ9NZM4 1560 aa10.08□□□□□ -0.8
PRDM1-207ENST00000489365 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
PRDM1-207ENST00000489365 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
PRDM1-207ENST00000489365 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
PRDM1-207ENST00000489365 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
PRDM1-207ENST00000489365 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
PRDM1-207ENST00000489365 CECR2Q9BXF3 1484 aa9.92□□□□□ -0.82
PRDM1-207ENST00000489365 CC2D2AQ9P2K1 1620 aa9.91□□□□□ -0.82
PRDM1-207ENST00000489365 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
PRDM1-207ENST00000489365 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
PRDM1-207ENST00000489365 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.85
PRDM1-207ENST00000489365 SLC4A1APQ9BWU0 796 aaKnown RBP9.69□□□□□ -0.86
PRDM1-207ENST00000489365 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
PRDM1-207ENST00000489365 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
PRDM1-207ENST00000489365 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
PRDM1-207ENST00000489365 DCAF8L1A6NGE4 600 aa9.59□□□□□ -0.87
PRDM1-207ENST00000489365 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
PRDM1-207ENST00000489365 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
PRDM1-207ENST00000489365 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
PRDM1-207ENST00000489365 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
PRDM1-207ENST00000489365 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
PRDM1-207ENST00000489365 BAZ1BQ9UIG0 1483 aaKnown RBP9.54□□□□□ -0.88
PRDM1-207ENST00000489365 CUX2O14529 1486 aa9.51□□□□□ -0.89
PRDM1-207ENST00000489365 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
PRDM1-207ENST00000489365 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
PRDM1-207ENST00000489365 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
PRDM1-207ENST00000489365 MROH2BQ7Z745 1585 aa9.43□□□□□ -0.9
PRDM1-207ENST00000489365 LAMC3Q9Y6N6 1575 aa9.42□□□□□ -0.9
PRDM1-207ENST00000489365 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
PRDM1-207ENST00000489365 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
PRDM1-207ENST00000489365 NESP48681 1621 aa9.4□□□□□ -0.9
PRDM1-207ENST00000489365 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
PRDM1-207ENST00000489365 ZBTB22O15209 634 aa9.37□□□□□ -0.91
PRDM1-207ENST00000489365 C1QBPQ07021 282 aaKnown RBP9.37□□□□□ -0.91
PRDM1-207ENST00000489365 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
PRDM1-207ENST00000489365 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
PRDM1-207ENST00000489365 CADPSQ9ULU8 1353 aa9.34□□□□□ -0.91
PRDM1-207ENST00000489365 WIZO95785 1651 aa9.32□□□□□ -0.92
PRDM1-207ENST00000489365 THOC2Q8NI27 1593 aaKnown RBP9.31□□□□□ -0.92
PRDM1-207ENST00000489365 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
PRDM1-207ENST00000489365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.29□□□□□ -0.92
PRDM1-207ENST00000489365 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
PRDM1-207ENST00000489365 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
PRDM1-207ENST00000489365 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.93
PRDM1-207ENST00000489365 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
PRDM1-207ENST00000489365 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
PRDM1-207ENST00000489365 WDR62O43379 1518 aa9.23□□□□□ -0.93
PRDM1-207ENST00000489365 CFTRP13569 1480 aa9.22□□□□□ -0.93
PRDM1-207ENST00000489365 MYCNP04198 464 aaPredicted RBP9.17□□□□□ -0.94
PRDM1-207ENST00000489365 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
PRDM1-207ENST00000489365 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
PRDM1-207ENST00000489365 CCDC88BA6NC98 1476 aa9.12□□□□□ -0.95
PRDM1-207ENST00000489365 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
PRDM1-207ENST00000489365 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
PRDM1-207ENST00000489365 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
PRDM1-207ENST00000489365 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
PRDM1-207ENST00000489365 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
PRDM1-207ENST00000489365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.06□□□□□ -0.96
PRDM1-207ENST00000489365 HNRNPUL2Q1KMD3 747 aaKnown RBP9.06□□□□□ -0.96
PRDM1-207ENST00000489365 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
PRDM1-207ENST00000489365 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
PRDM1-207ENST00000489365 SAMD1Q6SPF0 538 aaPredicted RBP9.03□□□□□ -0.96
PRDM1-207ENST00000489365 ATXN8OSP0DMR3 200 aa9.02□□□□□ -0.97
PRDM1-207ENST00000489365 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
PRDM1-207ENST00000489365 FBLN2P98095 1184 aa8.97□□□□□ -0.97
PRDM1-207ENST00000489365 EIF4G3O43432 1585 aaKnown RBP8.97□□□□□ -0.97
PRDM1-207ENST00000489365 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.98
PRDM1-207ENST00000489365 SOGA1O94964 1423 aa8.95□□□□□ -0.98
PRDM1-207ENST00000489365 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
PRDM1-207ENST00000489365 APLP2Q06481 763 aa8.94□□□□□ -0.98
PRDM1-207ENST00000489365 ATF5Q9Y2D1 282 aaPredicted RBP8.93□□□□□ -0.98
PRDM1-207ENST00000489365 AQRO60306 1485 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms