RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 RUSC2Q8N2Y8 1516 aa11.71□□□□□ -0.54
TMC1-204ENST00000486417 NESP48681 1621 aa11.68□□□□□ -0.54
TMC1-204ENST00000486417 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
TMC1-204ENST00000486417 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
TMC1-204ENST00000486417 KIF21BO75037 1637 aa11.66□□□□□ -0.54
TMC1-204ENST00000486417 DSG3P32926 999 aa11.65□□□□□ -0.55
TMC1-204ENST00000486417 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.55
TMC1-204ENST00000486417 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
TMC1-204ENST00000486417 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
TMC1-204ENST00000486417 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
TMC1-204ENST00000486417 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
TMC1-204ENST00000486417 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
TMC1-204ENST00000486417 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
TMC1-204ENST00000486417 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
TMC1-204ENST00000486417 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
TMC1-204ENST00000486417 TNIKQ9UKE5 1360 aa11.56□□□□□ -0.56
TMC1-204ENST00000486417 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
TMC1-204ENST00000486417 PDS5BQ9NTI5 1447 aa11.56□□□□□ -0.56
TMC1-204ENST00000486417 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
TMC1-204ENST00000486417 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
TMC1-204ENST00000486417 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
TMC1-204ENST00000486417 OSCARQ8IYS5 282 aa11.55□□□□□ -0.56
TMC1-204ENST00000486417 CEP162Q5TB80 1403 aa11.53□□□□□ -0.56
TMC1-204ENST00000486417 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
TMC1-204ENST00000486417 CUX2O14529 1486 aa11.52□□□□□ -0.57
TMC1-204ENST00000486417 PRXQ9BXM0 1461 aa11.52□□□□□ -0.57
TMC1-204ENST00000486417 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.57
TMC1-204ENST00000486417 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
TMC1-204ENST00000486417 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
TMC1-204ENST00000486417 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
TMC1-204ENST00000486417 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
TMC1-204ENST00000486417 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
TMC1-204ENST00000486417 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
TMC1-204ENST00000486417 CUL7Q14999 1698 aa11.44□□□□□ -0.58
TMC1-204ENST00000486417 TARBP1Q13395 1621 aaKnown RBP11.43□□□□□ -0.58
TMC1-204ENST00000486417 WDR62O43379 1518 aa11.42□□□□□ -0.58
TMC1-204ENST00000486417 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
TMC1-204ENST00000486417 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
TMC1-204ENST00000486417 IGF1RP08069 1367 aa11.4□□□□□ -0.58
TMC1-204ENST00000486417 PKD2Q13563 968 aa11.4□□□□□ -0.58
TMC1-204ENST00000486417 CLIP1P30622 1438 aa11.4□□□□□ -0.58
TMC1-204ENST00000486417 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
TMC1-204ENST00000486417 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
TMC1-204ENST00000486417 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
TMC1-204ENST00000486417 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
TMC1-204ENST00000486417 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
TMC1-204ENST00000486417 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
TMC1-204ENST00000486417 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
TMC1-204ENST00000486417 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
TMC1-204ENST00000486417 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
TMC1-204ENST00000486417 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
TMC1-204ENST00000486417 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
TMC1-204ENST00000486417 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
TMC1-204ENST00000486417 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
TMC1-204ENST00000486417 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
TMC1-204ENST00000486417 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
TMC1-204ENST00000486417 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
TMC1-204ENST00000486417 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
TMC1-204ENST00000486417 EIF4G3O43432 1585 aaKnown RBP11.29□□□□□ -0.6
TMC1-204ENST00000486417 ARHGAP35Q9NRY4 1499 aa11.29□□□□□ -0.6
TMC1-204ENST00000486417 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
TMC1-204ENST00000486417 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
TMC1-204ENST00000486417 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
TMC1-204ENST00000486417 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
TMC1-204ENST00000486417 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
TMC1-204ENST00000486417 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
TMC1-204ENST00000486417 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
TMC1-204ENST00000486417 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMC1-204ENST00000486417 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
TMC1-204ENST00000486417 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
TMC1-204ENST00000486417 MIER1Q8N108 512 aa11.23□□□□□ -0.61
TMC1-204ENST00000486417 FHAD1B1AJZ9 1412 aa11.22□□□□□ -0.61
TMC1-204ENST00000486417 SAMD9Q5K651 1589 aa11.21□□□□□ -0.62
TMC1-204ENST00000486417 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
TMC1-204ENST00000486417 CFAP43Q8NDM7 1665 aa11.18□□□□□ -0.62
TMC1-204ENST00000486417 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
TMC1-204ENST00000486417 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
TMC1-204ENST00000486417 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
TMC1-204ENST00000486417 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
TMC1-204ENST00000486417 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
TMC1-204ENST00000486417 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMC1-204ENST00000486417 TTBK1Q5TCY1 1321 aaPredicted RBP11.14□□□□□ -0.63
TMC1-204ENST00000486417 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
TMC1-204ENST00000486417 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
TMC1-204ENST00000486417 GRIN2AQ12879 1464 aa11.13□□□□□ -0.63
TMC1-204ENST00000486417 RGL2O15211 777 aa11.13□□□□□ -0.63
TMC1-204ENST00000486417 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
TMC1-204ENST00000486417 HRCP23327 699 aa11.11□□□□□ -0.63
TMC1-204ENST00000486417 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
TMC1-204ENST00000486417 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
TMC1-204ENST00000486417 UGGT2Q9NYU1 1516 aa11.09□□□□□ -0.63
TMC1-204ENST00000486417 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
TMC1-204ENST00000486417 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
TMC1-204ENST00000486417 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
TMC1-204ENST00000486417 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
TMC1-204ENST00000486417 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
TMC1-204ENST00000486417 KIAA0556O60303 1618 aa11.07□□□□□ -0.64
TMC1-204ENST00000486417 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
TMC1-204ENST00000486417 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
TMC1-204ENST00000486417 CHD1O14646 1710 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms