RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
TMC1-204ENST00000486417 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TMC1-204ENST00000486417 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
TMC1-204ENST00000486417 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
TMC1-204ENST00000486417 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
TMC1-204ENST00000486417 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
TMC1-204ENST00000486417 FOXD1Q16676 465 aa15.45■□□□□ 0.06
TMC1-204ENST00000486417 ADRA2BP18089 450 aa15.36■□□□□ 0.05
TMC1-204ENST00000486417 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
TMC1-204ENST00000486417 KCNA4P22459 653 aa14.68□□□□□ -0.06
TMC1-204ENST00000486417 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
TMC1-204ENST00000486417 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
TMC1-204ENST00000486417 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
TMC1-204ENST00000486417 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
TMC1-204ENST00000486417 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
TMC1-204ENST00000486417 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
TMC1-204ENST00000486417 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
TMC1-204ENST00000486417 MSH5O43196 834 aa13.87□□□□□ -0.19
TMC1-204ENST00000486417 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
TMC1-204ENST00000486417 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
TMC1-204ENST00000486417 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
TMC1-204ENST00000486417 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
TMC1-204ENST00000486417 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
TMC1-204ENST00000486417 ZBTB22O15209 634 aa13.59□□□□□ -0.23
TMC1-204ENST00000486417 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.26
TMC1-204ENST00000486417 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
TMC1-204ENST00000486417 DMRT2Q9Y5R5 561 aa13.34□□□□□ -0.27
TMC1-204ENST00000486417 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
TMC1-204ENST00000486417 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
TMC1-204ENST00000486417 ABCC9O60706 1549 aa13.26□□□□□ -0.29
TMC1-204ENST00000486417 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
TMC1-204ENST00000486417 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
TMC1-204ENST00000486417 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
TMC1-204ENST00000486417 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
TMC1-204ENST00000486417 NACADO15069 1562 aa13.15□□□□□ -0.3
TMC1-204ENST00000486417 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
TMC1-204ENST00000486417 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
TMC1-204ENST00000486417 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
TMC1-204ENST00000486417 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
TMC1-204ENST00000486417 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
TMC1-204ENST00000486417 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
TMC1-204ENST00000486417 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
TMC1-204ENST00000486417 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
TMC1-204ENST00000486417 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
TMC1-204ENST00000486417 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
TMC1-204ENST00000486417 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
TMC1-204ENST00000486417 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
TMC1-204ENST00000486417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMC1-204ENST00000486417 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
TMC1-204ENST00000486417 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
TMC1-204ENST00000486417 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
TMC1-204ENST00000486417 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
TMC1-204ENST00000486417 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
TMC1-204ENST00000486417 WIZO95785 1651 aa12.5□□□□□ -0.41
TMC1-204ENST00000486417 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
TMC1-204ENST00000486417 FKBP8Q14318 412 aa12.44□□□□□ -0.42
TMC1-204ENST00000486417 SLC24A1O60721 1099 aa12.41□□□□□ -0.42
TMC1-204ENST00000486417 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
TMC1-204ENST00000486417 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
TMC1-204ENST00000486417 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
TMC1-204ENST00000486417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
TMC1-204ENST00000486417 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
TMC1-204ENST00000486417 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
TMC1-204ENST00000486417 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
TMC1-204ENST00000486417 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
TMC1-204ENST00000486417 ATAD2BQ9ULI0 1458 aa12.23□□□□□ -0.45
TMC1-204ENST00000486417 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
TMC1-204ENST00000486417 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
TMC1-204ENST00000486417 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
TMC1-204ENST00000486417 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
TMC1-204ENST00000486417 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
TMC1-204ENST00000486417 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
TMC1-204ENST00000486417 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
TMC1-204ENST00000486417 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
TMC1-204ENST00000486417 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
TMC1-204ENST00000486417 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
TMC1-204ENST00000486417 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
TMC1-204ENST00000486417 APLP2Q06481 763 aa12.01□□□□□ -0.49
TMC1-204ENST00000486417 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
TMC1-204ENST00000486417 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
TMC1-204ENST00000486417 PRDM2Q13029 1718 aa11.96□□□□□ -0.5
TMC1-204ENST00000486417 POLA2Q14181 598 aa11.95□□□□□ -0.5
TMC1-204ENST00000486417 CAPN15O75808 1086 aa11.92□□□□□ -0.5
TMC1-204ENST00000486417 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
TMC1-204ENST00000486417 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
TMC1-204ENST00000486417 WRNQ14191 1432 aaPredicted RBP eCLIP11.87□□□□□ -0.51
TMC1-204ENST00000486417 CFTRP13569 1480 aa11.87□□□□□ -0.51
TMC1-204ENST00000486417 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
TMC1-204ENST00000486417 ABCB7O75027 752 aa11.84□□□□□ -0.51
TMC1-204ENST00000486417 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
TMC1-204ENST00000486417 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
TMC1-204ENST00000486417 FBLN2P98095 1184 aa11.81□□□□□ -0.52
TMC1-204ENST00000486417 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
TMC1-204ENST00000486417 PROM2Q8N271 834 aa11.79□□□□□ -0.52
TMC1-204ENST00000486417 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.52
TMC1-204ENST00000486417 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
TMC1-204ENST00000486417 EEA1Q15075 1411 aa11.75□□□□□ -0.53
TMC1-204ENST00000486417 CUX1P39880 1505 aa11.75□□□□□ -0.53
TMC1-204ENST00000486417 SOGA1O94964 1423 aa11.74□□□□□ -0.53
TMC1-204ENST00000486417 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms