RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SETD5Q9C0A6 1442 aa32.48■■■□□ 2.79
CLN5-202ENST00000485938 SUPT16HQ9Y5B9 1047 aaKnown RBP32.47■■■□□ 2.79
CLN5-202ENST00000485938 PHLDB1Q86UU1 1377 aa32.45■■■□□ 2.79
CLN5-202ENST00000485938 CFAP43Q8NDM7 1665 aa32.42■■■□□ 2.78
CLN5-202ENST00000485938 FHAD1B1AJZ9 1412 aa32.41■■■□□ 2.78
CLN5-202ENST00000485938 PCF11O94913 1555 aaKnown RBP32.36■■■□□ 2.77
CLN5-202ENST00000485938 NESP48681 1621 aa32.31■■■□□ 2.76
CLN5-202ENST00000485938 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
CLN5-202ENST00000485938 WDR97A6NE52 1622 aa32.3■■■□□ 2.76
CLN5-202ENST00000485938 FAM50AQ14320 339 aaKnown RBP32.28■■■□□ 2.76
CLN5-202ENST00000485938 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
CLN5-202ENST00000485938 KCNH8Q96L42 1107 aa32.25■■■□□ 2.75
CLN5-202ENST00000485938 SIN3AQ96ST3 1273 aa32.23■■■□□ 2.75
CLN5-202ENST00000485938 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
CLN5-202ENST00000485938 P3H3Q8IVL6 736 aa32.21■■■□□ 2.75
CLN5-202ENST00000485938 TIMELESSQ9UNS1 1208 aa32.19■■■□□ 2.74
CLN5-202ENST00000485938 FHOD3Q2V2M9 1422 aa32.19■■■□□ 2.74
CLN5-202ENST00000485938 EFCAB5A4FU69 1503 aa32.19■■■□□ 2.74
CLN5-202ENST00000485938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.16■■■□□ 2.74
CLN5-202ENST00000485938 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
CLN5-202ENST00000485938 CASKIN1Q8WXD9 1431 aa32.15■■■□□ 2.74
CLN5-202ENST00000485938 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
CLN5-202ENST00000485938 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
CLN5-202ENST00000485938 ATP1B4Q9UN42 357 aaPredicted RBP32.12■■■□□ 2.73
CLN5-202ENST00000485938 DDX10Q13206 875 aaKnown RBP32.11■■■□□ 2.73
CLN5-202ENST00000485938 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
CLN5-202ENST00000485938 PPP1R15AO75807 674 aaPredicted RBP32.09■■■□□ 2.73
CLN5-202ENST00000485938 CUL7Q14999 1698 aa32.07■■■□□ 2.72
CLN5-202ENST00000485938 POLA1P09884 1462 aaPredicted RBP32.06■■■□□ 2.72
CLN5-202ENST00000485938 CTTNBP2Q8WZ74 1663 aa32.05■■■□□ 2.72
CLN5-202ENST00000485938 TOPBP1Q92547 1522 aa32.04■■■□□ 2.72
CLN5-202ENST00000485938 TSHZ2Q9NRE2 1034 aa32.02■■■□□ 2.72
CLN5-202ENST00000485938 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
CLN5-202ENST00000485938 FGD6Q6ZV73 1430 aa32■■■□□ 2.71
CLN5-202ENST00000485938 FMN1Q68DA7 1419 aa31.97■■■□□ 2.71
CLN5-202ENST00000485938 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
CLN5-202ENST00000485938 CCDC18Q5T9S5 1454 aa31.9■■■□□ 2.7
CLN5-202ENST00000485938 CCER2I3L3R5 266 aa31.89■■■□□ 2.7
CLN5-202ENST00000485938 HIRIP3Q9BW71 556 aaPredicted RBP31.88■■■□□ 2.69
CLN5-202ENST00000485938 HFM1A2PYH4 1435 aa31.88■■■□□ 2.69
CLN5-202ENST00000485938 PTPRKQ15262 1439 aa31.85■■■□□ 2.69
CLN5-202ENST00000485938 UACAQ9BZF9 1416 aa31.85■■■□□ 2.69
CLN5-202ENST00000485938 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
CLN5-202ENST00000485938 MTUS2Q5JR59 1369 aa31.84■■■□□ 2.69
CLN5-202ENST00000485938 PTPN23Q9H3S7 1636 aa31.84■■■□□ 2.69
CLN5-202ENST00000485938 TONSLQ96HA7 1378 aa31.83■■■□□ 2.69
CLN5-202ENST00000485938 SAMD9Q5K651 1589 aa31.83■■■□□ 2.69
CLN5-202ENST00000485938 LRRIQ1Q96JM4 1722 aa31.81■■■□□ 2.68
CLN5-202ENST00000485938 ANP32CO43423 234 aa31.81■■■□□ 2.68
CLN5-202ENST00000485938 FKBP8Q14318 412 aa31.81■■■□□ 2.68
CLN5-202ENST00000485938 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
CLN5-202ENST00000485938 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
CLN5-202ENST00000485938 BCANQ96GW7 911 aa31.76■■■□□ 2.68
CLN5-202ENST00000485938 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
CLN5-202ENST00000485938 NCOA2Q15596 1464 aa31.76■■■□□ 2.67
CLN5-202ENST00000485938 NAIPQ13075 1403 aa31.75■■■□□ 2.67
CLN5-202ENST00000485938 MYOM3Q5VTT5 1437 aa31.75■■■□□ 2.67
CLN5-202ENST00000485938 ABCA5Q8WWZ7 1642 aa31.73■■■□□ 2.67
CLN5-202ENST00000485938 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
CLN5-202ENST00000485938 SUPT6HQ7KZ85 1726 aaKnown RBP31.7■■■□□ 2.66
CLN5-202ENST00000485938 TRIM52Q96A61 297 aa31.67■■■□□ 2.66
CLN5-202ENST00000485938 EHBP1L1Q8N3D4 1523 aa31.67■■■□□ 2.66
CLN5-202ENST00000485938 KDM5BQ9UGL1 1544 aa31.67■■■□□ 2.66
CLN5-202ENST00000485938 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
CLN5-202ENST00000485938 NEFLP07196 543 aa31.64■■■□□ 2.66
CLN5-202ENST00000485938 GAPVD1Q14C86 1478 aa31.63■■■□□ 2.65
CLN5-202ENST00000485938 UGGT2Q9NYU1 1516 aa31.62■■■□□ 2.65
CLN5-202ENST00000485938 ARHGEF11O15085 1522 aa31.61■■■□□ 2.65
CLN5-202ENST00000485938 MAGI3Q5TCQ9 1506 aa31.55■■■□□ 2.64
CLN5-202ENST00000485938 ANP32EQ9BTT0 268 aa31.54■■■□□ 2.64
CLN5-202ENST00000485938 TCOF1Q13428 1488 aaKnown RBP31.52■■■□□ 2.64
CLN5-202ENST00000485938 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.64
CLN5-202ENST00000485938 HECW1Q76N89 1606 aa31.48■■■□□ 2.63
CLN5-202ENST00000485938 DENND4BO75064 1496 aaPredicted RBP31.47■■■□□ 2.63
CLN5-202ENST00000485938 AKNAQ7Z591 1439 aa31.44■■■□□ 2.62
CLN5-202ENST00000485938 RRP7BPQ9NSQ0 103 aa31.44■■■□□ 2.62
CLN5-202ENST00000485938 WASHC2AQ641Q2 1341 aa31.39■■■□□ 2.62
CLN5-202ENST00000485938 HSPA5P11021 654 aaKnown RBP31.39■■■□□ 2.62
CLN5-202ENST00000485938 CHIC2Q9UKJ5 165 aa31.38■■■□□ 2.61
CLN5-202ENST00000485938 KDM6BO15054 1643 aa31.38■■■□□ 2.61
CLN5-202ENST00000485938 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
CLN5-202ENST00000485938 MRC2Q9UBG0 1479 aa31.38■■■□□ 2.61
CLN5-202ENST00000485938 RBM19Q9Y4C8 960 aaKnown RBP31.36■■■□□ 2.61
CLN5-202ENST00000485938 EPRSP07814 1512 aaKnown RBP31.35■■■□□ 2.61
CLN5-202ENST00000485938 HNRNPUQ00839 825 aaKnown RBP eCLIP31.33■■■□□ 2.61
CLN5-202ENST00000485938 MIA2Q96PC5 1412 aa31.33■■■□□ 2.61
CLN5-202ENST00000485938 IQGAP2Q13576 1575 aa31.3■■■□□ 2.6
CLN5-202ENST00000485938 EIF4G2P78344 907 aaKnown RBP eCLIP31.29■■■□□ 2.6
CLN5-202ENST00000485938 MPHOSPH9Q99550 1183 aa31.27■■■□□ 2.6
CLN5-202ENST00000485938 PBRM1Q86U86 1689 aa31.27■■■□□ 2.6
CLN5-202ENST00000485938 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.6
CLN5-202ENST00000485938 CNTLNQ9NXG0 1405 aa31.25■■■□□ 2.59
CLN5-202ENST00000485938 WDR62O43379 1518 aa31.25■■■□□ 2.59
CLN5-202ENST00000485938 L3MBTL2Q969R5 705 aa31.22■■■□□ 2.59
CLN5-202ENST00000485938 ADAMTS12P58397 1594 aa31.2■■■□□ 2.58
CLN5-202ENST00000485938 NCOA1Q15788 1441 aa31.18■■■□□ 2.58
CLN5-202ENST00000485938 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
CLN5-202ENST00000485938 ROCK1Q13464 1354 aa31.15■■■□□ 2.58
CLN5-202ENST00000485938 CCDC7Q96M83 1385 aa31.15■■■□□ 2.58
CLN5-202ENST00000485938 FOXD1Q16676 465 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms