RNA–Protein interactions for RNA: ENST00000483600.1

AFF3-214, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-214ENST00000483600 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
AFF3-214ENST00000483600 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
AFF3-214ENST00000483600 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
AFF3-214ENST00000483600 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
AFF3-214ENST00000483600 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
AFF3-214ENST00000483600 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
AFF3-214ENST00000483600 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
AFF3-214ENST00000483600 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
AFF3-214ENST00000483600 NESP48681 1621 aa14.12□□□□□ -0.15
AFF3-214ENST00000483600 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
AFF3-214ENST00000483600 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
AFF3-214ENST00000483600 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
AFF3-214ENST00000483600 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
AFF3-214ENST00000483600 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
AFF3-214ENST00000483600 CUX1P39880 1505 aa14.01□□□□□ -0.17
AFF3-214ENST00000483600 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
AFF3-214ENST00000483600 EEA1Q15075 1411 aa13.98□□□□□ -0.17
AFF3-214ENST00000483600 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
AFF3-214ENST00000483600 PROM2Q8N271 834 aa13.96□□□□□ -0.17
AFF3-214ENST00000483600 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
AFF3-214ENST00000483600 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
AFF3-214ENST00000483600 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
AFF3-214ENST00000483600 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
AFF3-214ENST00000483600 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
AFF3-214ENST00000483600 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
AFF3-214ENST00000483600 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
AFF3-214ENST00000483600 FKBP8Q14318 412 aa13.9□□□□□ -0.18
AFF3-214ENST00000483600 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
AFF3-214ENST00000483600 SOGA1O94964 1423 aa13.89□□□□□ -0.19
AFF3-214ENST00000483600 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
AFF3-214ENST00000483600 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
AFF3-214ENST00000483600 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
AFF3-214ENST00000483600 WDR62O43379 1518 aa13.85□□□□□ -0.19
AFF3-214ENST00000483600 HAX1O00165 279 aa13.83□□□□□ -0.2
AFF3-214ENST00000483600 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
AFF3-214ENST00000483600 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
AFF3-214ENST00000483600 CUX2O14529 1486 aa13.79□□□□□ -0.2
AFF3-214ENST00000483600 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
AFF3-214ENST00000483600 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
AFF3-214ENST00000483600 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
AFF3-214ENST00000483600 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
AFF3-214ENST00000483600 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
AFF3-214ENST00000483600 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
AFF3-214ENST00000483600 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
AFF3-214ENST00000483600 IGF1RP08069 1367 aa13.73□□□□□ -0.21
AFF3-214ENST00000483600 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
AFF3-214ENST00000483600 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
AFF3-214ENST00000483600 KIF21BO75037 1637 aa13.72□□□□□ -0.21
AFF3-214ENST00000483600 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
AFF3-214ENST00000483600 PRXQ9BXM0 1461 aa13.7□□□□□ -0.22
AFF3-214ENST00000483600 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
AFF3-214ENST00000483600 EVX2Q03828 476 aa13.7□□□□□ -0.22
AFF3-214ENST00000483600 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
AFF3-214ENST00000483600 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
AFF3-214ENST00000483600 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
AFF3-214ENST00000483600 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
AFF3-214ENST00000483600 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
AFF3-214ENST00000483600 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
AFF3-214ENST00000483600 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
AFF3-214ENST00000483600 CUL7Q14999 1698 aa13.63□□□□□ -0.23
AFF3-214ENST00000483600 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
AFF3-214ENST00000483600 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
AFF3-214ENST00000483600 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
AFF3-214ENST00000483600 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
AFF3-214ENST00000483600 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
AFF3-214ENST00000483600 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
AFF3-214ENST00000483600 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
AFF3-214ENST00000483600 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
AFF3-214ENST00000483600 PBRM1Q86U86 1689 aa13.55□□□□□ -0.24
AFF3-214ENST00000483600 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
AFF3-214ENST00000483600 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
AFF3-214ENST00000483600 MIER1Q8N108 512 aa13.52□□□□□ -0.25
AFF3-214ENST00000483600 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
AFF3-214ENST00000483600 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
AFF3-214ENST00000483600 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
AFF3-214ENST00000483600 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
AFF3-214ENST00000483600 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
AFF3-214ENST00000483600 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
AFF3-214ENST00000483600 CLIP1P30622 1438 aa13.47□□□□□ -0.25
AFF3-214ENST00000483600 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
AFF3-214ENST00000483600 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
AFF3-214ENST00000483600 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
AFF3-214ENST00000483600 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
AFF3-214ENST00000483600 GABBR2O75899 941 aa13.41□□□□□ -0.26
AFF3-214ENST00000483600 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
AFF3-214ENST00000483600 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
AFF3-214ENST00000483600 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
AFF3-214ENST00000483600 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
AFF3-214ENST00000483600 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
AFF3-214ENST00000483600 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
AFF3-214ENST00000483600 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
AFF3-214ENST00000483600 NUP160Q12769 1436 aa13.35□□□□□ -0.27
AFF3-214ENST00000483600 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
AFF3-214ENST00000483600 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
AFF3-214ENST00000483600 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
AFF3-214ENST00000483600 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
AFF3-214ENST00000483600 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
AFF3-214ENST00000483600 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
AFF3-214ENST00000483600 TSPYL2Q9H2G4 693 aaPredicted RBP13.31□□□□□ -0.28
AFF3-214ENST00000483600 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms