RNA–Protein interactions for RNA: ENST00000479980.1

PDE1C-209, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-209ENST00000479980 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
PDE1C-209ENST00000479980 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
PDE1C-209ENST00000479980 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
PDE1C-209ENST00000479980 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
PDE1C-209ENST00000479980 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
PDE1C-209ENST00000479980 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
PDE1C-209ENST00000479980 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
PDE1C-209ENST00000479980 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
PDE1C-209ENST00000479980 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
PDE1C-209ENST00000479980 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
PDE1C-209ENST00000479980 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
PDE1C-209ENST00000479980 GABBR2O75899 941 aa12.65□□□□□ -0.38
PDE1C-209ENST00000479980 NESP48681 1621 aa12.62□□□□□ -0.39
PDE1C-209ENST00000479980 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
PDE1C-209ENST00000479980 CUX1P39880 1505 aa12.61□□□□□ -0.39
PDE1C-209ENST00000479980 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
PDE1C-209ENST00000479980 EEA1Q15075 1411 aa12.6□□□□□ -0.39
PDE1C-209ENST00000479980 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
PDE1C-209ENST00000479980 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
PDE1C-209ENST00000479980 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
PDE1C-209ENST00000479980 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
PDE1C-209ENST00000479980 LHX8Q68G74 356 aa12.54□□□□□ -0.4
PDE1C-209ENST00000479980 SOGA1O94964 1423 aa12.53□□□□□ -0.4
PDE1C-209ENST00000479980 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
PDE1C-209ENST00000479980 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
PDE1C-209ENST00000479980 TOPBP1Q92547 1522 aa12.5□□□□□ -0.41
PDE1C-209ENST00000479980 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
PDE1C-209ENST00000479980 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
PDE1C-209ENST00000479980 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
PDE1C-209ENST00000479980 KIF21BO75037 1637 aa12.46□□□□□ -0.41
PDE1C-209ENST00000479980 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
PDE1C-209ENST00000479980 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
PDE1C-209ENST00000479980 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
PDE1C-209ENST00000479980 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
PDE1C-209ENST00000479980 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
PDE1C-209ENST00000479980 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
PDE1C-209ENST00000479980 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
PDE1C-209ENST00000479980 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
PDE1C-209ENST00000479980 GOLGA3Q08378 1498 aa12.4□□□□□ -0.43
PDE1C-209ENST00000479980 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
PDE1C-209ENST00000479980 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
PDE1C-209ENST00000479980 CUX2O14529 1486 aa12.38□□□□□ -0.43
PDE1C-209ENST00000479980 WDR62O43379 1518 aa12.37□□□□□ -0.43
PDE1C-209ENST00000479980 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
PDE1C-209ENST00000479980 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
PDE1C-209ENST00000479980 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
PDE1C-209ENST00000479980 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
PDE1C-209ENST00000479980 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
PDE1C-209ENST00000479980 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
PDE1C-209ENST00000479980 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
PDE1C-209ENST00000479980 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
PDE1C-209ENST00000479980 CUL7Q14999 1698 aa12.32□□□□□ -0.44
PDE1C-209ENST00000479980 RAPGEF2Q9Y4G8 1499 aa12.3□□□□□ -0.44
PDE1C-209ENST00000479980 CLCN6P51797 869 aa12.3□□□□□ -0.44
PDE1C-209ENST00000479980 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
PDE1C-209ENST00000479980 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
PDE1C-209ENST00000479980 IGF1RP08069 1367 aa12.28□□□□□ -0.44
PDE1C-209ENST00000479980 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
PDE1C-209ENST00000479980 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
PDE1C-209ENST00000479980 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
PDE1C-209ENST00000479980 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
PDE1C-209ENST00000479980 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
PDE1C-209ENST00000479980 CTTNBP2Q8WZ74 1663 aa12.21□□□□□ -0.45
PDE1C-209ENST00000479980 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
PDE1C-209ENST00000479980 TDRD9Q8NDG6 1382 aaKnown RBP12.19□□□□□ -0.46
PDE1C-209ENST00000479980 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
PDE1C-209ENST00000479980 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
PDE1C-209ENST00000479980 CLIP1P30622 1438 aa12.17□□□□□ -0.46
PDE1C-209ENST00000479980 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
PDE1C-209ENST00000479980 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
PDE1C-209ENST00000479980 ADAMTS12P58397 1594 aa12.16□□□□□ -0.46
PDE1C-209ENST00000479980 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
PDE1C-209ENST00000479980 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
PDE1C-209ENST00000479980 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE1C-209ENST00000479980 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
PDE1C-209ENST00000479980 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
PDE1C-209ENST00000479980 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
PDE1C-209ENST00000479980 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
PDE1C-209ENST00000479980 SNAPC4Q5SXM2 1469 aa12.07□□□□□ -0.48
PDE1C-209ENST00000479980 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
PDE1C-209ENST00000479980 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
PDE1C-209ENST00000479980 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
PDE1C-209ENST00000479980 ARHGAP35Q9NRY4 1499 aa12.05□□□□□ -0.48
PDE1C-209ENST00000479980 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
PDE1C-209ENST00000479980 SYNJ2O15056 1496 aa12.02□□□□□ -0.49
PDE1C-209ENST00000479980 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
PDE1C-209ENST00000479980 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
PDE1C-209ENST00000479980 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
PDE1C-209ENST00000479980 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
PDE1C-209ENST00000479980 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
PDE1C-209ENST00000479980 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
PDE1C-209ENST00000479980 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
PDE1C-209ENST00000479980 CHD1O14646 1710 aa11.97□□□□□ -0.49
PDE1C-209ENST00000479980 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.49
PDE1C-209ENST00000479980 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
PDE1C-209ENST00000479980 CEP170Q5SW79 1584 aa11.95□□□□□ -0.5
PDE1C-209ENST00000479980 UGGT2Q9NYU1 1516 aa11.95□□□□□ -0.5
PDE1C-209ENST00000479980 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
PDE1C-209ENST00000479980 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
PDE1C-209ENST00000479980 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms