RNA–Protein interactions for RNA: ENST00000479980.1

PDE1C-209, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-209ENST00000479980 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
PDE1C-209ENST00000479980 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
PDE1C-209ENST00000479980 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
PDE1C-209ENST00000479980 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
PDE1C-209ENST00000479980 FOXD1Q16676 465 aa19.48■□□□□ 0.71
PDE1C-209ENST00000479980 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
PDE1C-209ENST00000479980 MSH5O43196 834 aa18.32■□□□□ 0.52
PDE1C-209ENST00000479980 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
PDE1C-209ENST00000479980 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
PDE1C-209ENST00000479980 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
PDE1C-209ENST00000479980 ADRA2BP18089 450 aa17.84■□□□□ 0.45
PDE1C-209ENST00000479980 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
PDE1C-209ENST00000479980 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
PDE1C-209ENST00000479980 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
PDE1C-209ENST00000479980 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
PDE1C-209ENST00000479980 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
PDE1C-209ENST00000479980 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
PDE1C-209ENST00000479980 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
PDE1C-209ENST00000479980 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
PDE1C-209ENST00000479980 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
PDE1C-209ENST00000479980 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
PDE1C-209ENST00000479980 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
PDE1C-209ENST00000479980 CCDC180Q9P1Z9 1646 aa15.38■□□□□ 0.05
PDE1C-209ENST00000479980 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
PDE1C-209ENST00000479980 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
PDE1C-209ENST00000479980 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
PDE1C-209ENST00000479980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDE1C-209ENST00000479980 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
PDE1C-209ENST00000479980 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
PDE1C-209ENST00000479980 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
PDE1C-209ENST00000479980 DSG3P32926 999 aa14.53□□□□□ -0.08
PDE1C-209ENST00000479980 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
PDE1C-209ENST00000479980 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
PDE1C-209ENST00000479980 POTEHQ6S545 545 aa14.47□□□□□ -0.09
PDE1C-209ENST00000479980 CAPN15O75808 1086 aa14.44□□□□□ -0.1
PDE1C-209ENST00000479980 ABCC9O60706 1549 aa14.37□□□□□ -0.11
PDE1C-209ENST00000479980 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
PDE1C-209ENST00000479980 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
PDE1C-209ENST00000479980 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
PDE1C-209ENST00000479980 NACADO15069 1562 aa14.26□□□□□ -0.13
PDE1C-209ENST00000479980 KCNA4P22459 653 aa14.18□□□□□ -0.14
PDE1C-209ENST00000479980 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
PDE1C-209ENST00000479980 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
PDE1C-209ENST00000479980 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
PDE1C-209ENST00000479980 ABCB7O75027 752 aa14.09□□□□□ -0.15
PDE1C-209ENST00000479980 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
PDE1C-209ENST00000479980 APLP2Q06481 763 aa14.07□□□□□ -0.16
PDE1C-209ENST00000479980 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
PDE1C-209ENST00000479980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
PDE1C-209ENST00000479980 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
PDE1C-209ENST00000479980 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
PDE1C-209ENST00000479980 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
PDE1C-209ENST00000479980 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
PDE1C-209ENST00000479980 POLA2Q14181 598 aa13.7□□□□□ -0.22
PDE1C-209ENST00000479980 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
PDE1C-209ENST00000479980 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
PDE1C-209ENST00000479980 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
PDE1C-209ENST00000479980 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
PDE1C-209ENST00000479980 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
PDE1C-209ENST00000479980 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
PDE1C-209ENST00000479980 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
PDE1C-209ENST00000479980 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDE1C-209ENST00000479980 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
PDE1C-209ENST00000479980 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
PDE1C-209ENST00000479980 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
PDE1C-209ENST00000479980 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
PDE1C-209ENST00000479980 WIZO95785 1651 aa13.4□□□□□ -0.26
PDE1C-209ENST00000479980 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
PDE1C-209ENST00000479980 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
PDE1C-209ENST00000479980 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
PDE1C-209ENST00000479980 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
PDE1C-209ENST00000479980 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
PDE1C-209ENST00000479980 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
PDE1C-209ENST00000479980 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
PDE1C-209ENST00000479980 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
PDE1C-209ENST00000479980 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
PDE1C-209ENST00000479980 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
PDE1C-209ENST00000479980 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
PDE1C-209ENST00000479980 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
PDE1C-209ENST00000479980 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
PDE1C-209ENST00000479980 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE1C-209ENST00000479980 HMGXB3Q12766 1538 aa13.14□□□□□ -0.31
PDE1C-209ENST00000479980 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
PDE1C-209ENST00000479980 NCAPD3P42695 1498 aa13.11□□□□□ -0.31
PDE1C-209ENST00000479980 HAX1O00165 279 aa13.11□□□□□ -0.31
PDE1C-209ENST00000479980 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
PDE1C-209ENST00000479980 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.32
PDE1C-209ENST00000479980 ZBTB22O15209 634 aa13.06□□□□□ -0.32
PDE1C-209ENST00000479980 EVX2Q03828 476 aa13.01□□□□□ -0.33
PDE1C-209ENST00000479980 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
PDE1C-209ENST00000479980 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
PDE1C-209ENST00000479980 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
PDE1C-209ENST00000479980 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
PDE1C-209ENST00000479980 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
PDE1C-209ENST00000479980 FBLN2P98095 1184 aa12.84□□□□□ -0.35
PDE1C-209ENST00000479980 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
PDE1C-209ENST00000479980 CFTRP13569 1480 aa12.81□□□□□ -0.36
PDE1C-209ENST00000479980 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
PDE1C-209ENST00000479980 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
PDE1C-209ENST00000479980 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms