RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
CHRNA4-204ENST00000475033 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
CHRNA4-204ENST00000475033 RBM19Q9Y4C8 960 aaKnown RBP18.51■□□□□ 0.55
CHRNA4-204ENST00000475033 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
CHRNA4-204ENST00000475033 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
CHRNA4-204ENST00000475033 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
CHRNA4-204ENST00000475033 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
CHRNA4-204ENST00000475033 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
CHRNA4-204ENST00000475033 NESP48681 1621 aa18.43■□□□□ 0.54
CHRNA4-204ENST00000475033 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
CHRNA4-204ENST00000475033 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
CHRNA4-204ENST00000475033 FBLN2P98095 1184 aa18.42■□□□□ 0.54
CHRNA4-204ENST00000475033 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CHRNA4-204ENST00000475033 MTUS2Q5JR59 1369 aa18.41■□□□□ 0.54
CHRNA4-204ENST00000475033 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
CHRNA4-204ENST00000475033 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.53
CHRNA4-204ENST00000475033 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
CHRNA4-204ENST00000475033 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
CHRNA4-204ENST00000475033 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
CHRNA4-204ENST00000475033 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
CHRNA4-204ENST00000475033 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
CHRNA4-204ENST00000475033 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
CHRNA4-204ENST00000475033 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
CHRNA4-204ENST00000475033 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.53
CHRNA4-204ENST00000475033 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
CHRNA4-204ENST00000475033 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
CHRNA4-204ENST00000475033 MSH5O43196 834 aa18.29■□□□□ 0.52
CHRNA4-204ENST00000475033 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
CHRNA4-204ENST00000475033 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
CHRNA4-204ENST00000475033 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-204ENST00000475033 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
CHRNA4-204ENST00000475033 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
CHRNA4-204ENST00000475033 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
CHRNA4-204ENST00000475033 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
CHRNA4-204ENST00000475033 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
CHRNA4-204ENST00000475033 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-204ENST00000475033 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
CHRNA4-204ENST00000475033 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
CHRNA4-204ENST00000475033 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
CHRNA4-204ENST00000475033 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
CHRNA4-204ENST00000475033 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
CHRNA4-204ENST00000475033 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
CHRNA4-204ENST00000475033 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
CHRNA4-204ENST00000475033 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
CHRNA4-204ENST00000475033 ANP32CO43423 234 aa18.11■□□□□ 0.49
CHRNA4-204ENST00000475033 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
CHRNA4-204ENST00000475033 NBR1Q14596 966 aa18.1■□□□□ 0.49
CHRNA4-204ENST00000475033 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
CHRNA4-204ENST00000475033 ABCA10Q8WWZ4 1543 aa18.09■□□□□ 0.49
CHRNA4-204ENST00000475033 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHRNA4-204ENST00000475033 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
CHRNA4-204ENST00000475033 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
CHRNA4-204ENST00000475033 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
CHRNA4-204ENST00000475033 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
CHRNA4-204ENST00000475033 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
CHRNA4-204ENST00000475033 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
CHRNA4-204ENST00000475033 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
CHRNA4-204ENST00000475033 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
CHRNA4-204ENST00000475033 FOXD1Q16676 465 aa18■□□□□ 0.47
CHRNA4-204ENST00000475033 FGD6Q6ZV73 1430 aa17.98■□□□□ 0.47
CHRNA4-204ENST00000475033 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
CHRNA4-204ENST00000475033 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
CHRNA4-204ENST00000475033 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
CHRNA4-204ENST00000475033 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CHRNA4-204ENST00000475033 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-204ENST00000475033 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
CHRNA4-204ENST00000475033 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
CHRNA4-204ENST00000475033 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
CHRNA4-204ENST00000475033 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
CHRNA4-204ENST00000475033 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
CHRNA4-204ENST00000475033 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
CHRNA4-204ENST00000475033 CCER2I3L3R5 266 aa17.89■□□□□ 0.45
CHRNA4-204ENST00000475033 RTN4Q9NQC3 1192 aaKnown RBP17.88■□□□□ 0.45
CHRNA4-204ENST00000475033 MAP3K1Q13233 1512 aa17.88■□□□□ 0.45
CHRNA4-204ENST00000475033 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
CHRNA4-204ENST00000475033 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
CHRNA4-204ENST00000475033 CUL7Q14999 1698 aa17.87■□□□□ 0.45
CHRNA4-204ENST00000475033 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
CHRNA4-204ENST00000475033 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
CHRNA4-204ENST00000475033 NOP58Q9Y2X3 529 aaKnown RBP17.85■□□□□ 0.45
CHRNA4-204ENST00000475033 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
CHRNA4-204ENST00000475033 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHRNA4-204ENST00000475033 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
CHRNA4-204ENST00000475033 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
CHRNA4-204ENST00000475033 SALL2Q9Y467 1007 aaPredicted RBP17.84■□□□□ 0.45
CHRNA4-204ENST00000475033 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
CHRNA4-204ENST00000475033 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
CHRNA4-204ENST00000475033 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
CHRNA4-204ENST00000475033 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
CHRNA4-204ENST00000475033 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
CHRNA4-204ENST00000475033 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CHRNA4-204ENST00000475033 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
CHRNA4-204ENST00000475033 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
CHRNA4-204ENST00000475033 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
CHRNA4-204ENST00000475033 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
CHRNA4-204ENST00000475033 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
CHRNA4-204ENST00000475033 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
CHRNA4-204ENST00000475033 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
CHRNA4-204ENST00000475033 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
CHRNA4-204ENST00000475033 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms