RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
CHRNA4-204ENST00000475033 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
CHRNA4-204ENST00000475033 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.23
CHRNA4-204ENST00000475033 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
CHRNA4-204ENST00000475033 HRCP23327 699 aa21.72■■□□□ 1.07
CHRNA4-204ENST00000475033 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
CHRNA4-204ENST00000475033 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-204ENST00000475033 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CHRNA4-204ENST00000475033 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
CHRNA4-204ENST00000475033 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
CHRNA4-204ENST00000475033 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CHRNA4-204ENST00000475033 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
CHRNA4-204ENST00000475033 ABCC9O60706 1549 aa20.96■□□□□ 0.95
CHRNA4-204ENST00000475033 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
CHRNA4-204ENST00000475033 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-204ENST00000475033 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
CHRNA4-204ENST00000475033 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
CHRNA4-204ENST00000475033 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
CHRNA4-204ENST00000475033 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
CHRNA4-204ENST00000475033 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
CHRNA4-204ENST00000475033 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
CHRNA4-204ENST00000475033 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-204ENST00000475033 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
CHRNA4-204ENST00000475033 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
CHRNA4-204ENST00000475033 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
CHRNA4-204ENST00000475033 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHRNA4-204ENST00000475033 MYT1Q01538 1121 aa20.28■□□□□ 0.84
CHRNA4-204ENST00000475033 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
CHRNA4-204ENST00000475033 NACADO15069 1562 aa20.21■□□□□ 0.83
CHRNA4-204ENST00000475033 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
CHRNA4-204ENST00000475033 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
CHRNA4-204ENST00000475033 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
CHRNA4-204ENST00000475033 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
CHRNA4-204ENST00000475033 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
CHRNA4-204ENST00000475033 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
CHRNA4-204ENST00000475033 UBTFP17480 764 aaKnown RBP19.99■□□□□ 0.79
CHRNA4-204ENST00000475033 WIZO95785 1651 aa19.87■□□□□ 0.77
CHRNA4-204ENST00000475033 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CHRNA4-204ENST00000475033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
CHRNA4-204ENST00000475033 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
CHRNA4-204ENST00000475033 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
CHRNA4-204ENST00000475033 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
CHRNA4-204ENST00000475033 APLP2Q06481 763 aa19.68■□□□□ 0.74
CHRNA4-204ENST00000475033 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
CHRNA4-204ENST00000475033 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
CHRNA4-204ENST00000475033 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
CHRNA4-204ENST00000475033 SMARCA4P51532 1647 aa19.52■□□□□ 0.71
CHRNA4-204ENST00000475033 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
CHRNA4-204ENST00000475033 SOGA1O94964 1423 aa19.49■□□□□ 0.71
CHRNA4-204ENST00000475033 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
CHRNA4-204ENST00000475033 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
CHRNA4-204ENST00000475033 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
CHRNA4-204ENST00000475033 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
CHRNA4-204ENST00000475033 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
CHRNA4-204ENST00000475033 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CHRNA4-204ENST00000475033 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.69
CHRNA4-204ENST00000475033 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
CHRNA4-204ENST00000475033 MIER1Q8N108 512 aa19.28■□□□□ 0.68
CHRNA4-204ENST00000475033 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
CHRNA4-204ENST00000475033 ITGAEP38570 1179 aa19.24■□□□□ 0.67
CHRNA4-204ENST00000475033 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
CHRNA4-204ENST00000475033 EEA1Q15075 1411 aa19.23■□□□□ 0.67
CHRNA4-204ENST00000475033 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
CHRNA4-204ENST00000475033 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
CHRNA4-204ENST00000475033 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
CHRNA4-204ENST00000475033 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CHRNA4-204ENST00000475033 BCL11AQ9H165 835 aa19.14■□□□□ 0.65
CHRNA4-204ENST00000475033 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
CHRNA4-204ENST00000475033 ANP32EQ9BTT0 268 aa19.04■□□□□ 0.64
CHRNA4-204ENST00000475033 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
CHRNA4-204ENST00000475033 P3H3Q8IVL6 736 aa19■□□□□ 0.63
CHRNA4-204ENST00000475033 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
CHRNA4-204ENST00000475033 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
CHRNA4-204ENST00000475033 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
CHRNA4-204ENST00000475033 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
CHRNA4-204ENST00000475033 BCANQ96GW7 911 aa18.9■□□□□ 0.62
CHRNA4-204ENST00000475033 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
CHRNA4-204ENST00000475033 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
CHRNA4-204ENST00000475033 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
CHRNA4-204ENST00000475033 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-204ENST00000475033 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
CHRNA4-204ENST00000475033 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
CHRNA4-204ENST00000475033 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
CHRNA4-204ENST00000475033 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
CHRNA4-204ENST00000475033 CUX2O14529 1486 aa18.77■□□□□ 0.6
CHRNA4-204ENST00000475033 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
CHRNA4-204ENST00000475033 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
CHRNA4-204ENST00000475033 KIF21BO75037 1637 aa18.68■□□□□ 0.58
CHRNA4-204ENST00000475033 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
CHRNA4-204ENST00000475033 TOP2BQ02880 1626 aa18.65■□□□□ 0.58
CHRNA4-204ENST00000475033 FKBP8Q14318 412 aa18.63■□□□□ 0.57
CHRNA4-204ENST00000475033 CUX1P39880 1505 aa18.63■□□□□ 0.57
CHRNA4-204ENST00000475033 CFTRP13569 1480 aa18.61■□□□□ 0.57
CHRNA4-204ENST00000475033 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
CHRNA4-204ENST00000475033 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
CHRNA4-204ENST00000475033 NEFLP07196 543 aa18.54■□□□□ 0.56
CHRNA4-204ENST00000475033 IGF1RP08069 1367 aa18.54■□□□□ 0.56
CHRNA4-204ENST00000475033 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
CHRNA4-204ENST00000475033 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
CHRNA4-204ENST00000475033 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
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