RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
GCOM1-203ENST00000460962 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
GCOM1-203ENST00000460962 FAM50AQ14320 339 aaKnown RBP17.39■□□□□ 0.37
GCOM1-203ENST00000460962 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
GCOM1-203ENST00000460962 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
GCOM1-203ENST00000460962 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
GCOM1-203ENST00000460962 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
GCOM1-203ENST00000460962 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
GCOM1-203ENST00000460962 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
GCOM1-203ENST00000460962 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
GCOM1-203ENST00000460962 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
GCOM1-203ENST00000460962 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
GCOM1-203ENST00000460962 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
GCOM1-203ENST00000460962 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.35
GCOM1-203ENST00000460962 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
GCOM1-203ENST00000460962 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
GCOM1-203ENST00000460962 EFCAB5A4FU69 1503 aa17.25■□□□□ 0.35
GCOM1-203ENST00000460962 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
GCOM1-203ENST00000460962 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
GCOM1-203ENST00000460962 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
GCOM1-203ENST00000460962 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
GCOM1-203ENST00000460962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
GCOM1-203ENST00000460962 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
GCOM1-203ENST00000460962 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
GCOM1-203ENST00000460962 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
GCOM1-203ENST00000460962 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
GCOM1-203ENST00000460962 CUL7Q14999 1698 aa17.19■□□□□ 0.34
GCOM1-203ENST00000460962 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
GCOM1-203ENST00000460962 FMN1Q68DA7 1419 aa17.17■□□□□ 0.34
GCOM1-203ENST00000460962 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
GCOM1-203ENST00000460962 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
GCOM1-203ENST00000460962 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
GCOM1-203ENST00000460962 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
GCOM1-203ENST00000460962 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
GCOM1-203ENST00000460962 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
GCOM1-203ENST00000460962 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
GCOM1-203ENST00000460962 ANP32CO43423 234 aa17.11■□□□□ 0.33
GCOM1-203ENST00000460962 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
GCOM1-203ENST00000460962 NESP48681 1621 aa17.1■□□□□ 0.33
GCOM1-203ENST00000460962 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
GCOM1-203ENST00000460962 BCANQ96GW7 911 aa17.08■□□□□ 0.33
GCOM1-203ENST00000460962 HFM1A2PYH4 1435 aa17.08■□□□□ 0.32
GCOM1-203ENST00000460962 FKBP8Q14318 412 aa17.08■□□□□ 0.32
GCOM1-203ENST00000460962 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
GCOM1-203ENST00000460962 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
GCOM1-203ENST00000460962 PTPN23Q9H3S7 1636 aa17.05■□□□□ 0.32
GCOM1-203ENST00000460962 NEFLP07196 543 aa17.04■□□□□ 0.32
GCOM1-203ENST00000460962 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
GCOM1-203ENST00000460962 SAMD9Q5K651 1589 aa17.03■□□□□ 0.32
GCOM1-203ENST00000460962 MYOM3Q5VTT5 1437 aa17.03■□□□□ 0.32
GCOM1-203ENST00000460962 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
GCOM1-203ENST00000460962 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
GCOM1-203ENST00000460962 NAIPQ13075 1403 aa17.01■□□□□ 0.31
GCOM1-203ENST00000460962 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
GCOM1-203ENST00000460962 GRIN2BQ13224 1484 aa17■□□□□ 0.31
GCOM1-203ENST00000460962 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
GCOM1-203ENST00000460962 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
GCOM1-203ENST00000460962 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
GCOM1-203ENST00000460962 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
GCOM1-203ENST00000460962 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
GCOM1-203ENST00000460962 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
GCOM1-203ENST00000460962 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
GCOM1-203ENST00000460962 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
GCOM1-203ENST00000460962 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
GCOM1-203ENST00000460962 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
GCOM1-203ENST00000460962 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
GCOM1-203ENST00000460962 KDM5BQ9UGL1 1544 aa16.9■□□□□ 0.3
GCOM1-203ENST00000460962 ARHGEF11O15085 1522 aa16.89■□□□□ 0.3
GCOM1-203ENST00000460962 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
GCOM1-203ENST00000460962 ANP32EQ9BTT0 268 aa16.89■□□□□ 0.29
GCOM1-203ENST00000460962 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
GCOM1-203ENST00000460962 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
GCOM1-203ENST00000460962 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
GCOM1-203ENST00000460962 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
GCOM1-203ENST00000460962 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
GCOM1-203ENST00000460962 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
GCOM1-203ENST00000460962 AKNAQ7Z591 1439 aa16.83■□□□□ 0.29
GCOM1-203ENST00000460962 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.29
GCOM1-203ENST00000460962 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
GCOM1-203ENST00000460962 EPRSP07814 1512 aaKnown RBP16.81■□□□□ 0.28
GCOM1-203ENST00000460962 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-203ENST00000460962 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
GCOM1-203ENST00000460962 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
GCOM1-203ENST00000460962 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
GCOM1-203ENST00000460962 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
GCOM1-203ENST00000460962 IQGAP2Q13576 1575 aa16.79■□□□□ 0.28
GCOM1-203ENST00000460962 KDM6BO15054 1643 aa16.79■□□□□ 0.28
GCOM1-203ENST00000460962 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
GCOM1-203ENST00000460962 ARID3CA6NKF2 412 aa16.77■□□□□ 0.27
GCOM1-203ENST00000460962 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
GCOM1-203ENST00000460962 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
GCOM1-203ENST00000460962 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
GCOM1-203ENST00000460962 FOXD1Q16676 465 aa16.74■□□□□ 0.27
GCOM1-203ENST00000460962 WDR62O43379 1518 aa16.74■□□□□ 0.27
GCOM1-203ENST00000460962 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
GCOM1-203ENST00000460962 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
GCOM1-203ENST00000460962 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.26
GCOM1-203ENST00000460962 CCDC7Q96M83 1385 aa16.7■□□□□ 0.26
GCOM1-203ENST00000460962 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
GCOM1-203ENST00000460962 DAPK1P53355 1430 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms