RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
PTCHD1-202ENST00000456522 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
PTCHD1-202ENST00000456522 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
PTCHD1-202ENST00000456522 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
PTCHD1-202ENST00000456522 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
PTCHD1-202ENST00000456522 WDR62O43379 1518 aa15.83■□□□□ 0.12
PTCHD1-202ENST00000456522 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
PTCHD1-202ENST00000456522 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
PTCHD1-202ENST00000456522 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
PTCHD1-202ENST00000456522 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
PTCHD1-202ENST00000456522 ABCB7O75027 752 aa15.74■□□□□ 0.11
PTCHD1-202ENST00000456522 DSG3P32926 999 aa15.73■□□□□ 0.11
PTCHD1-202ENST00000456522 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.1
PTCHD1-202ENST00000456522 SOGA1O94964 1423 aa15.7■□□□□ 0.1
PTCHD1-202ENST00000456522 CUX2O14529 1486 aa15.69■□□□□ 0.1
PTCHD1-202ENST00000456522 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
PTCHD1-202ENST00000456522 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
PTCHD1-202ENST00000456522 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
PTCHD1-202ENST00000456522 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
PTCHD1-202ENST00000456522 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
PTCHD1-202ENST00000456522 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PTCHD1-202ENST00000456522 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.09
PTCHD1-202ENST00000456522 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
PTCHD1-202ENST00000456522 SLC24A1O60721 1099 aa15.57■□□□□ 0.08
PTCHD1-202ENST00000456522 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
PTCHD1-202ENST00000456522 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
PTCHD1-202ENST00000456522 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTCHD1-202ENST00000456522 ABCA5Q8WWZ7 1642 aa15.53■□□□□ 0.08
PTCHD1-202ENST00000456522 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
PTCHD1-202ENST00000456522 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
PTCHD1-202ENST00000456522 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
PTCHD1-202ENST00000456522 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
PTCHD1-202ENST00000456522 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
PTCHD1-202ENST00000456522 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
PTCHD1-202ENST00000456522 SSUH2Q9Y2M2 353 aa15.49■□□□□ 0.07
PTCHD1-202ENST00000456522 EEA1Q15075 1411 aa15.48■□□□□ 0.07
PTCHD1-202ENST00000456522 GRIN2BQ13224 1484 aa15.46■□□□□ 0.06
PTCHD1-202ENST00000456522 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
PTCHD1-202ENST00000456522 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
PTCHD1-202ENST00000456522 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
PTCHD1-202ENST00000456522 IGF1RP08069 1367 aa15.44■□□□□ 0.06
PTCHD1-202ENST00000456522 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
PTCHD1-202ENST00000456522 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
PTCHD1-202ENST00000456522 CUL7Q14999 1698 aa15.38■□□□□ 0.05
PTCHD1-202ENST00000456522 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
PTCHD1-202ENST00000456522 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
PTCHD1-202ENST00000456522 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
PTCHD1-202ENST00000456522 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
PTCHD1-202ENST00000456522 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
PTCHD1-202ENST00000456522 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
PTCHD1-202ENST00000456522 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
PTCHD1-202ENST00000456522 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
PTCHD1-202ENST00000456522 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
PTCHD1-202ENST00000456522 KIF21BO75037 1637 aa15.31■□□□□ 0.04
PTCHD1-202ENST00000456522 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
PTCHD1-202ENST00000456522 CHD1O14646 1710 aa15.29■□□□□ 0.04
PTCHD1-202ENST00000456522 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
PTCHD1-202ENST00000456522 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
PTCHD1-202ENST00000456522 UBTFP17480 764 aaKnown RBP15.26■□□□□ 0.03
PTCHD1-202ENST00000456522 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
PTCHD1-202ENST00000456522 PKD2Q13563 968 aa15.2■□□□□ 0.02
PTCHD1-202ENST00000456522 CEP170Q5SW79 1584 aa15.18■□□□□ 0.02
PTCHD1-202ENST00000456522 CTTNBP2Q8WZ74 1663 aa15.17■□□□□ 0.02
PTCHD1-202ENST00000456522 NUP160Q12769 1436 aa15.16■□□□□ 0.02
PTCHD1-202ENST00000456522 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
PTCHD1-202ENST00000456522 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
PTCHD1-202ENST00000456522 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
PTCHD1-202ENST00000456522 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
PTCHD1-202ENST00000456522 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
PTCHD1-202ENST00000456522 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
PTCHD1-202ENST00000456522 KLHL34Q8N239 644 aa15.06■□□□□ 0
PTCHD1-202ENST00000456522 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
PTCHD1-202ENST00000456522 JPH4Q96JJ6 628 aa15.05■□□□□ -0
PTCHD1-202ENST00000456522 CEP162Q5TB80 1403 aa15.03■□□□□ -0
PTCHD1-202ENST00000456522 P3H3Q8IVL6 736 aa15.02■□□□□ -0
PTCHD1-202ENST00000456522 CLIP1P30622 1438 aa15.01□□□□□ -0.01
PTCHD1-202ENST00000456522 MIER1Q8N108 512 aa15.01□□□□□ -0.01
PTCHD1-202ENST00000456522 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
PTCHD1-202ENST00000456522 SHROOM2Q13796 1616 aa15□□□□□ -0.01
PTCHD1-202ENST00000456522 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
PTCHD1-202ENST00000456522 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
PTCHD1-202ENST00000456522 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 ARHGAP35Q9NRY4 1499 aa14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 SAMD9Q5K651 1589 aa14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
PTCHD1-202ENST00000456522 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
PTCHD1-202ENST00000456522 DISP1Q96F81 1524 aa14.96□□□□□ -0.02
PTCHD1-202ENST00000456522 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
PTCHD1-202ENST00000456522 KIAA0556O60303 1618 aa14.95□□□□□ -0.02
PTCHD1-202ENST00000456522 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
PTCHD1-202ENST00000456522 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
PTCHD1-202ENST00000456522 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
PTCHD1-202ENST00000456522 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
PTCHD1-202ENST00000456522 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
PTCHD1-202ENST00000456522 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
PTCHD1-202ENST00000456522 PTPRGP23470 1445 aa14.86□□□□□ -0.03
PTCHD1-202ENST00000456522 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
PTCHD1-202ENST00000456522 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms