RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.75
MDH1-208ENST00000454035 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.75
MDH1-208ENST00000454035 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
MDH1-208ENST00000454035 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
MDH1-208ENST00000454035 OSCARQ8IYS5 282 aa10.37□□□□□ -0.75
MDH1-208ENST00000454035 IFT140Q96RY7 1462 aa10.33□□□□□ -0.76
MDH1-208ENST00000454035 ABCB7O75027 752 aa10.32□□□□□ -0.76
MDH1-208ENST00000454035 CUX1P39880 1505 aa10.32□□□□□ -0.76
MDH1-208ENST00000454035 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
MDH1-208ENST00000454035 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
MDH1-208ENST00000454035 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
MDH1-208ENST00000454035 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
MDH1-208ENST00000454035 SOGA1O94964 1423 aa10.28□□□□□ -0.76
MDH1-208ENST00000454035 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
MDH1-208ENST00000454035 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
MDH1-208ENST00000454035 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
MDH1-208ENST00000454035 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
MDH1-208ENST00000454035 RAD54L2Q9Y4B4 1467 aa10.27□□□□□ -0.77
MDH1-208ENST00000454035 CHD1O14646 1710 aa10.26□□□□□ -0.77
MDH1-208ENST00000454035 WRNQ14191 1432 aaPredicted RBP eCLIP10.25□□□□□ -0.77
MDH1-208ENST00000454035 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
MDH1-208ENST00000454035 TDRD9Q8NDG6 1382 aaKnown RBP10.22□□□□□ -0.77
MDH1-208ENST00000454035 TOP2BQ02880 1626 aa10.22□□□□□ -0.77
MDH1-208ENST00000454035 SYNJ1O43426 1573 aa10.21□□□□□ -0.78
MDH1-208ENST00000454035 EIF4G3O43432 1585 aaKnown RBP10.21□□□□□ -0.78
MDH1-208ENST00000454035 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.78
MDH1-208ENST00000454035 CYB5RLQ6IPT4 315 aa10.2□□□□□ -0.78
MDH1-208ENST00000454035 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
MDH1-208ENST00000454035 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
MDH1-208ENST00000454035 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
MDH1-208ENST00000454035 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
MDH1-208ENST00000454035 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
MDH1-208ENST00000454035 GRIN2BQ13224 1484 aa10.15□□□□□ -0.78
MDH1-208ENST00000454035 GAPVD1Q14C86 1478 aa10.15□□□□□ -0.78
MDH1-208ENST00000454035 APLP2Q06481 763 aa10.14□□□□□ -0.79
MDH1-208ENST00000454035 ABCA5Q8WWZ7 1642 aa10.12□□□□□ -0.79
MDH1-208ENST00000454035 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
MDH1-208ENST00000454035 SNAPC4Q5SXM2 1469 aa10.11□□□□□ -0.79
MDH1-208ENST00000454035 MAGI1Q96QZ7 1491 aaPredicted RBP10.11□□□□□ -0.79
MDH1-208ENST00000454035 FBLN2P98095 1184 aa10.09□□□□□ -0.79
MDH1-208ENST00000454035 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
MDH1-208ENST00000454035 HAX1O00165 279 aa10.08□□□□□ -0.8
MDH1-208ENST00000454035 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
MDH1-208ENST00000454035 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
MDH1-208ENST00000454035 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
MDH1-208ENST00000454035 PROM2Q8N271 834 aa10.06□□□□□ -0.8
MDH1-208ENST00000454035 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
MDH1-208ENST00000454035 IGF1RP08069 1367 aa10.04□□□□□ -0.8
MDH1-208ENST00000454035 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
MDH1-208ENST00000454035 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
MDH1-208ENST00000454035 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
MDH1-208ENST00000454035 ADAMTS12P58397 1594 aa10.01□□□□□ -0.81
MDH1-208ENST00000454035 GRIN2AQ12879 1464 aa10.01□□□□□ -0.81
MDH1-208ENST00000454035 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
MDH1-208ENST00000454035 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
MDH1-208ENST00000454035 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
MDH1-208ENST00000454035 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
MDH1-208ENST00000454035 NUP160Q12769 1436 aa9.99□□□□□ -0.81
MDH1-208ENST00000454035 POLA2Q14181 598 aa9.97□□□□□ -0.81
MDH1-208ENST00000454035 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
MDH1-208ENST00000454035 RUSC2Q8N2Y8 1516 aa9.96□□□□□ -0.82
MDH1-208ENST00000454035 CEP170Q5SW79 1584 aa9.95□□□□□ -0.82
MDH1-208ENST00000454035 CUL7Q14999 1698 aa9.94□□□□□ -0.82
MDH1-208ENST00000454035 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
MDH1-208ENST00000454035 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
MDH1-208ENST00000454035 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
MDH1-208ENST00000454035 PKD2Q13563 968 aa9.9□□□□□ -0.82
MDH1-208ENST00000454035 ERCC6L2Q5T890 1561 aa9.89□□□□□ -0.83
MDH1-208ENST00000454035 KIAA0586Q9BVV6 1533 aa9.89□□□□□ -0.83
MDH1-208ENST00000454035 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
MDH1-208ENST00000454035 SHROOM2Q13796 1616 aa9.89□□□□□ -0.83
MDH1-208ENST00000454035 RAPGEF2Q9Y4G8 1499 aa9.88□□□□□ -0.83
MDH1-208ENST00000454035 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
MDH1-208ENST00000454035 EVX2Q03828 476 aa9.86□□□□□ -0.83
MDH1-208ENST00000454035 LHX8Q68G74 356 aa9.86□□□□□ -0.83
MDH1-208ENST00000454035 EEA1Q15075 1411 aa9.85□□□□□ -0.83
MDH1-208ENST00000454035 PRG4Q92954 1404 aaPredicted RBP9.85□□□□□ -0.83
MDH1-208ENST00000454035 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
MDH1-208ENST00000454035 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
MDH1-208ENST00000454035 IQGAP2Q13576 1575 aa9.8□□□□□ -0.84
MDH1-208ENST00000454035 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
MDH1-208ENST00000454035 FAM9AQ8IZU1 332 aaPredicted RBP9.78□□□□□ -0.84
MDH1-208ENST00000454035 UGGT2Q9NYU1 1516 aa9.77□□□□□ -0.84
MDH1-208ENST00000454035 CARMIL2Q6F5E8 1435 aa9.77□□□□□ -0.85
MDH1-208ENST00000454035 VSIG10Q8N0Z9 540 aa9.76□□□□□ -0.85
MDH1-208ENST00000454035 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
MDH1-208ENST00000454035 DISP1Q96F81 1524 aa9.76□□□□□ -0.85
MDH1-208ENST00000454035 BCANQ96GW7 911 aa9.75□□□□□ -0.85
MDH1-208ENST00000454035 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
MDH1-208ENST00000454035 TNIKQ9UKE5 1360 aa9.75□□□□□ -0.85
MDH1-208ENST00000454035 PTPRGP23470 1445 aa9.74□□□□□ -0.85
MDH1-208ENST00000454035 SPOCK2Q92563 424 aa9.74□□□□□ -0.85
MDH1-208ENST00000454035 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
MDH1-208ENST00000454035 KIF21BO75037 1637 aa9.72□□□□□ -0.85
MDH1-208ENST00000454035 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
MDH1-208ENST00000454035 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.86
MDH1-208ENST00000454035 GOLGA3Q08378 1498 aa9.71□□□□□ -0.86
MDH1-208ENST00000454035 KDM6BO15054 1643 aa9.71□□□□□ -0.86
MDH1-208ENST00000454035 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
MDH1-208ENST00000454035 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms