RNA–Protein interactions for RNA: ENST00000444897.2

PMPCA-204, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-204ENST00000444897 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
PMPCA-204ENST00000444897 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
PMPCA-204ENST00000444897 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
PMPCA-204ENST00000444897 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
PMPCA-204ENST00000444897 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
PMPCA-204ENST00000444897 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
PMPCA-204ENST00000444897 PCF11O94913 1555 aaKnown RBP23.32■■□□□ 1.32
PMPCA-204ENST00000444897 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
PMPCA-204ENST00000444897 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
PMPCA-204ENST00000444897 TSHZ2Q9NRE2 1034 aa23.3■■□□□ 1.32
PMPCA-204ENST00000444897 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
PMPCA-204ENST00000444897 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
PMPCA-204ENST00000444897 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
PMPCA-204ENST00000444897 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
PMPCA-204ENST00000444897 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
PMPCA-204ENST00000444897 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
PMPCA-204ENST00000444897 FHOD3Q2V2M9 1422 aa23.19■■□□□ 1.3
PMPCA-204ENST00000444897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.19■■□□□ 1.3
PMPCA-204ENST00000444897 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
PMPCA-204ENST00000444897 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
PMPCA-204ENST00000444897 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.31e-6■■■■■ 34.4
PMPCA-204ENST00000444897 FKBP8Q14318 412 aa23.12■■□□□ 1.29
PMPCA-204ENST00000444897 CCER2I3L3R5 266 aa23.11■■□□□ 1.29
PMPCA-204ENST00000444897 BCANQ96GW7 911 aa23.11■■□□□ 1.29
PMPCA-204ENST00000444897 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
PMPCA-204ENST00000444897 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
PMPCA-204ENST00000444897 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
PMPCA-204ENST00000444897 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
PMPCA-204ENST00000444897 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.29
PMPCA-204ENST00000444897 ANP32CO43423 234 aa23.08■■□□□ 1.28
PMPCA-204ENST00000444897 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.28
PMPCA-204ENST00000444897 RAD54L2Q9Y4B4 1467 aa23.08■■□□□ 1.28
PMPCA-204ENST00000444897 CTTNBP2Q8WZ74 1663 aa23.07■■□□□ 1.28
PMPCA-204ENST00000444897 CUL7Q14999 1698 aa23.06■■□□□ 1.28
PMPCA-204ENST00000444897 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
PMPCA-204ENST00000444897 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
PMPCA-204ENST00000444897 FMN1Q68DA7 1419 aa23.03■■□□□ 1.28
PMPCA-204ENST00000444897 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
PMPCA-204ENST00000444897 NEFLP07196 543 aa23.03■■□□□ 1.28
PMPCA-204ENST00000444897 ANP32EQ9BTT0 268 aa23.02■■□□□ 1.28
PMPCA-204ENST00000444897 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
PMPCA-204ENST00000444897 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
PMPCA-204ENST00000444897 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
PMPCA-204ENST00000444897 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
PMPCA-204ENST00000444897 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
PMPCA-204ENST00000444897 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
PMPCA-204ENST00000444897 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
PMPCA-204ENST00000444897 PTPRKQ15262 1439 aa22.96■■□□□ 1.27
PMPCA-204ENST00000444897 NAIPQ13075 1403 aa22.9■■□□□ 1.26
PMPCA-204ENST00000444897 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
PMPCA-204ENST00000444897 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
PMPCA-204ENST00000444897 NCOA2Q15596 1464 aa22.89■■□□□ 1.25
PMPCA-204ENST00000444897 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
PMPCA-204ENST00000444897 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
PMPCA-204ENST00000444897 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
PMPCA-204ENST00000444897 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
PMPCA-204ENST00000444897 KDM5BQ9UGL1 1544 aa22.84■■□□□ 1.25
PMPCA-204ENST00000444897 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
PMPCA-204ENST00000444897 NESP48681 1621 aa22.83■■□□□ 1.25
PMPCA-204ENST00000444897 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
PMPCA-204ENST00000444897 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
PMPCA-204ENST00000444897 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
PMPCA-204ENST00000444897 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
PMPCA-204ENST00000444897 ARHGEF11O15085 1522 aa22.75■■□□□ 1.23
PMPCA-204ENST00000444897 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
PMPCA-204ENST00000444897 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
PMPCA-204ENST00000444897 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
PMPCA-204ENST00000444897 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
PMPCA-204ENST00000444897 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
PMPCA-204ENST00000444897 HECW1Q76N89 1606 aa22.72■■□□□ 1.23
PMPCA-204ENST00000444897 TCOF1Q13428 1488 aaKnown RBP22.71■■□□□ 1.23
PMPCA-204ENST00000444897 HSPA5P11021 654 aaKnown RBP22.71■■□□□ 1.23
PMPCA-204ENST00000444897 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.23
PMPCA-204ENST00000444897 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
PMPCA-204ENST00000444897 WASHC2AQ641Q2 1341 aa22.7■■□□□ 1.22
PMPCA-204ENST00000444897 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
PMPCA-204ENST00000444897 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
PMPCA-204ENST00000444897 AKNAQ7Z591 1439 aa22.67■■□□□ 1.22
PMPCA-204ENST00000444897 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
PMPCA-204ENST00000444897 EIF4G2P78344 907 aaKnown RBP eCLIP22.64■■□□□ 1.21
PMPCA-204ENST00000444897 CNTLNQ9NXG0 1405 aa22.62■■□□□ 1.21
PMPCA-204ENST00000444897 KDM6BO15054 1643 aa22.62■■□□□ 1.21
PMPCA-204ENST00000444897 IRX6P78412 446 aaPredicted RBP22.58■■□□□ 1.21
PMPCA-204ENST00000444897 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
PMPCA-204ENST00000444897 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
PMPCA-204ENST00000444897 EPRSP07814 1512 aaKnown RBP22.56■■□□□ 1.2
PMPCA-204ENST00000444897 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
PMPCA-204ENST00000444897 ERICH6BQ5W0A0 696 aa22.54■■□□□ 1.2
PMPCA-204ENST00000444897 L3MBTL2Q969R5 705 aa22.54■■□□□ 1.2
PMPCA-204ENST00000444897 NCOA1Q15788 1441 aa22.54■■□□□ 1.2
PMPCA-204ENST00000444897 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
PMPCA-204ENST00000444897 CCDC7Q96M83 1385 aa22.52■■□□□ 1.2
PMPCA-204ENST00000444897 PDS5BQ9NTI5 1447 aa22.52■■□□□ 1.2
PMPCA-204ENST00000444897 MSH5O43196 834 aa22.51■■□□□ 1.19
PMPCA-204ENST00000444897 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
PMPCA-204ENST00000444897 CDK13Q14004 1512 aaKnown RBP22.51■■□□□ 1.19
PMPCA-204ENST00000444897 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
PMPCA-204ENST00000444897 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
PMPCA-204ENST00000444897 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
PMPCA-204ENST00000444897 PRKRIP1Q9H875 184 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms