RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
AP1S3-206ENST00000443700 ITGAEP38570 1179 aa22.1■■□□□ 1.13
AP1S3-206ENST00000443700 TIMELESSQ9UNS1 1208 aa22.1■■□□□ 1.13
AP1S3-206ENST00000443700 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
AP1S3-206ENST00000443700 EFCAB5A4FU69 1503 aa22.08■■□□□ 1.12
AP1S3-206ENST00000443700 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
AP1S3-206ENST00000443700 PHLDB1Q86UU1 1377 aa22.05■■□□□ 1.12
AP1S3-206ENST00000443700 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
AP1S3-206ENST00000443700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.12
AP1S3-206ENST00000443700 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
AP1S3-206ENST00000443700 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
AP1S3-206ENST00000443700 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
AP1S3-206ENST00000443700 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
AP1S3-206ENST00000443700 CUL7Q14999 1698 aa21.99■■□□□ 1.11
AP1S3-206ENST00000443700 TSHZ2Q9NRE2 1034 aa21.97■■□□□ 1.11
AP1S3-206ENST00000443700 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
AP1S3-206ENST00000443700 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
AP1S3-206ENST00000443700 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
AP1S3-206ENST00000443700 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
AP1S3-206ENST00000443700 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
AP1S3-206ENST00000443700 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
AP1S3-206ENST00000443700 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
AP1S3-206ENST00000443700 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
AP1S3-206ENST00000443700 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
AP1S3-206ENST00000443700 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
AP1S3-206ENST00000443700 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
AP1S3-206ENST00000443700 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
AP1S3-206ENST00000443700 FGD6Q6ZV73 1430 aa21.84■■□□□ 1.09
AP1S3-206ENST00000443700 NEFLP07196 543 aa21.83■■□□□ 1.09
AP1S3-206ENST00000443700 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
AP1S3-206ENST00000443700 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
AP1S3-206ENST00000443700 ANP32CO43423 234 aa21.81■■□□□ 1.08
AP1S3-206ENST00000443700 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
AP1S3-206ENST00000443700 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
AP1S3-206ENST00000443700 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
AP1S3-206ENST00000443700 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
AP1S3-206ENST00000443700 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
AP1S3-206ENST00000443700 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
AP1S3-206ENST00000443700 HFM1A2PYH4 1435 aa21.78■■□□□ 1.08
AP1S3-206ENST00000443700 FKBP8Q14318 412 aa21.78■■□□□ 1.08
AP1S3-206ENST00000443700 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
AP1S3-206ENST00000443700 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
AP1S3-206ENST00000443700 SAMD9Q5K651 1589 aa21.77■■□□□ 1.07
AP1S3-206ENST00000443700 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
AP1S3-206ENST00000443700 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
AP1S3-206ENST00000443700 P3H3Q8IVL6 736 aa21.73■■□□□ 1.07
AP1S3-206ENST00000443700 EHBP1L1Q8N3D4 1523 aa21.72■■□□□ 1.07
AP1S3-206ENST00000443700 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
AP1S3-206ENST00000443700 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
AP1S3-206ENST00000443700 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
AP1S3-206ENST00000443700 BCANQ96GW7 911 aa21.69■■□□□ 1.06
AP1S3-206ENST00000443700 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
AP1S3-206ENST00000443700 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
AP1S3-206ENST00000443700 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
AP1S3-206ENST00000443700 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
AP1S3-206ENST00000443700 GRIN2BQ13224 1484 aa21.65■■□□□ 1.06
AP1S3-206ENST00000443700 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
AP1S3-206ENST00000443700 NAIPQ13075 1403 aa21.64■■□□□ 1.05
AP1S3-206ENST00000443700 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
AP1S3-206ENST00000443700 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
AP1S3-206ENST00000443700 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
AP1S3-206ENST00000443700 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
AP1S3-206ENST00000443700 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
AP1S3-206ENST00000443700 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.04
AP1S3-206ENST00000443700 AKNAQ7Z591 1439 aa21.58■■□□□ 1.04
AP1S3-206ENST00000443700 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
AP1S3-206ENST00000443700 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
AP1S3-206ENST00000443700 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
AP1S3-206ENST00000443700 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
AP1S3-206ENST00000443700 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
AP1S3-206ENST00000443700 NESP48681 1621 aa21.46■■□□□ 1.03
AP1S3-206ENST00000443700 ERICH6BQ5W0A0 696 aa21.45■■□□□ 1.02
AP1S3-206ENST00000443700 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
AP1S3-206ENST00000443700 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
AP1S3-206ENST00000443700 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
AP1S3-206ENST00000443700 MIA2Q96PC5 1412 aa21.42■■□□□ 1.02
AP1S3-206ENST00000443700 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
AP1S3-206ENST00000443700 PBRM1Q86U86 1689 aa21.39■■□□□ 1.01
AP1S3-206ENST00000443700 DENND4BO75064 1496 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-206ENST00000443700 HSPA5P11021 654 aaKnown RBP21.38■■□□□ 1.01
AP1S3-206ENST00000443700 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
AP1S3-206ENST00000443700 WASHC2AQ641Q2 1341 aa21.38■■□□□ 1.01
AP1S3-206ENST00000443700 IQGAP2Q13576 1575 aa21.36■■□□□ 1.01
AP1S3-206ENST00000443700 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
AP1S3-206ENST00000443700 EPRSP07814 1512 aaKnown RBP21.35■■□□□ 1.01
AP1S3-206ENST00000443700 KDM6BO15054 1643 aa21.35■■□□□ 1.01
AP1S3-206ENST00000443700 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
AP1S3-206ENST00000443700 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
AP1S3-206ENST00000443700 TARBP1Q13395 1621 aaKnown RBP21.34■■□□□ 1.01
AP1S3-206ENST00000443700 WDR62O43379 1518 aa21.33■■□□□ 1.01
AP1S3-206ENST00000443700 NCOA1Q15788 1441 aa21.33■■□□□ 1.01
AP1S3-206ENST00000443700 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
AP1S3-206ENST00000443700 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
AP1S3-206ENST00000443700 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
AP1S3-206ENST00000443700 ADAMTS12P58397 1594 aa21.29■■□□□ 1
AP1S3-206ENST00000443700 ROCK1Q13464 1354 aa21.29■■□□□ 1
AP1S3-206ENST00000443700 CCDC7Q96M83 1385 aa21.29■■□□□ 1
AP1S3-206ENST00000443700 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
AP1S3-206ENST00000443700 PPP4R2Q9NY27 417 aa21.26■□□□□ 0.99
AP1S3-206ENST00000443700 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms