RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■■□ 26.3
LTBR-203ENST00000441074 PRXQ9BXM0 1461 aa17.58■□□□□ 0.41
LTBR-203ENST00000441074 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
LTBR-203ENST00000441074 CLSPNQ9HAW4 1339 aa17.53■□□□□ 0.4
LTBR-203ENST00000441074 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
LTBR-203ENST00000441074 CLIP1P30622 1438 aa17.53■□□□□ 0.4
LTBR-203ENST00000441074 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
LTBR-203ENST00000441074 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
LTBR-203ENST00000441074 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
LTBR-203ENST00000441074 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
LTBR-203ENST00000441074 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
LTBR-203ENST00000441074 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
LTBR-203ENST00000441074 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
LTBR-203ENST00000441074 P3H3Q8IVL6 736 aa17.39■□□□□ 0.38
LTBR-203ENST00000441074 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
LTBR-203ENST00000441074 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
LTBR-203ENST00000441074 FBLN2P98095 1184 aa17.38■□□□□ 0.37
LTBR-203ENST00000441074 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
LTBR-203ENST00000441074 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
LTBR-203ENST00000441074 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
LTBR-203ENST00000441074 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.37
LTBR-203ENST00000441074 ANP32EQ9BTT0 268 aa17.33■□□□□ 0.36
LTBR-203ENST00000441074 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
LTBR-203ENST00000441074 APLP2Q06481 763 aa17.31■□□□□ 0.36
LTBR-203ENST00000441074 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
LTBR-203ENST00000441074 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
LTBR-203ENST00000441074 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
LTBR-203ENST00000441074 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
LTBR-203ENST00000441074 ADAMTS12P58397 1594 aa17.27■□□□□ 0.36
LTBR-203ENST00000441074 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
LTBR-203ENST00000441074 CHD1O14646 1710 aa17.24■□□□□ 0.35
LTBR-203ENST00000441074 CUL7Q14999 1698 aa17.24■□□□□ 0.35
LTBR-203ENST00000441074 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
LTBR-203ENST00000441074 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
LTBR-203ENST00000441074 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
LTBR-203ENST00000441074 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
LTBR-203ENST00000441074 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
LTBR-203ENST00000441074 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
LTBR-203ENST00000441074 NUP160Q12769 1436 aa17.11■□□□□ 0.33
LTBR-203ENST00000441074 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
LTBR-203ENST00000441074 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.33
LTBR-203ENST00000441074 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
LTBR-203ENST00000441074 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
LTBR-203ENST00000441074 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
LTBR-203ENST00000441074 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
LTBR-203ENST00000441074 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
LTBR-203ENST00000441074 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
LTBR-203ENST00000441074 ITGAEP38570 1179 aa16.98■□□□□ 0.31
LTBR-203ENST00000441074 IQGAP2Q13576 1575 aa16.97■□□□□ 0.31
LTBR-203ENST00000441074 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
LTBR-203ENST00000441074 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
LTBR-203ENST00000441074 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
LTBR-203ENST00000441074 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
LTBR-203ENST00000441074 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
LTBR-203ENST00000441074 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
LTBR-203ENST00000441074 FKBP8Q14318 412 aa16.91■□□□□ 0.3
LTBR-203ENST00000441074 FMN1Q68DA7 1419 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 BCANQ96GW7 911 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
LTBR-203ENST00000441074 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.3
LTBR-203ENST00000441074 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
LTBR-203ENST00000441074 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
LTBR-203ENST00000441074 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
LTBR-203ENST00000441074 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
LTBR-203ENST00000441074 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
LTBR-203ENST00000441074 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
LTBR-203ENST00000441074 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
LTBR-203ENST00000441074 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
LTBR-203ENST00000441074 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
LTBR-203ENST00000441074 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
LTBR-203ENST00000441074 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
LTBR-203ENST00000441074 NEFLP07196 543 aa16.82■□□□□ 0.28
LTBR-203ENST00000441074 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
LTBR-203ENST00000441074 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
LTBR-203ENST00000441074 RAB3GAP2Q9H2M9 1393 aa16.79■□□□□ 0.28
LTBR-203ENST00000441074 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
LTBR-203ENST00000441074 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
LTBR-203ENST00000441074 PTPRGP23470 1445 aa16.78■□□□□ 0.28
LTBR-203ENST00000441074 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.27
LTBR-203ENST00000441074 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
LTBR-203ENST00000441074 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
LTBR-203ENST00000441074 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
LTBR-203ENST00000441074 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
LTBR-203ENST00000441074 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
LTBR-203ENST00000441074 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
LTBR-203ENST00000441074 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
LTBR-203ENST00000441074 MSH5O43196 834 aa16.71■□□□□ 0.27
LTBR-203ENST00000441074 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
LTBR-203ENST00000441074 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
LTBR-203ENST00000441074 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
LTBR-203ENST00000441074 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
LTBR-203ENST00000441074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
LTBR-203ENST00000441074 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
LTBR-203ENST00000441074 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
LTBR-203ENST00000441074 UACAQ9BZF9 1416 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms